TCONS_00011047 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011047
Unique NameTCONS_00011047
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1949

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011047 ID=TCONS_00011047|Name=TCONS_00011047|organism=Clytia hemisphaerica|type=transcript|length=1949bp
GATTTATTTTACAGTGCGCGTGCAGACATAAACCCTGACATCATTTTGCA
GTTTTAAAAGGGATCTTACGCTCATCAGAGAAAGTAAAACCATTTAATGC
GAGAGCTCGCTcgtttcattttttgagaaagTGATAGGGTGTTTTGAAAC
AACAAGGAGATTGTATAACGCGTTTGGTTGTTTGACAAAACACGGAAAAG
ACTTTGGttttatatcaaaattcattgacTTTGTATCAGTCACTCATTAc
agaatattttcattttttacaacttGAAGCTGGTGACCTTAAAGGATATT
CTCGAGGTTTTGATTTCGTTGGAAAGAGATTTTAAAGAGGAGATGGAAGC
AACCATGGagcCAAAGAAATTTGATGTATTGCGACCACCAACAAGATGGG
CAAGATGTTGAGATCACtcatcttcaaaaacaaaacatccaATCTTTCCA
TCGAAGGAGTCAacaacaaaaacgaaattataaaaaacacaaaaataacc
GATTTAACGGTATATTTCAAATCCCTACAAACAAATCCAGTGAAATGACA
GAATCGATTGGGATTTATGAACTGACATCCACTGAAGCAAAGGAGACTTT
TGGTGAAGAGGGAACTTGTTTTTTCGTCGTGGCAAATATTCCTCAAGATC
GCTCGCGAGTTGTCTCAAACTTTATCGAAGAAAATATTCCGGTATCTACA
CATAATACGGTTATCCCGCATTCTTTCACCCGGAAGAACCCGCATTTGAG
TGTTGAAACGAACGACCATTCGGTGTCGTCGGGNGCGGACGAACCCGCAT
TTGAGTGTTGAAACGAACGACCATTCGGTGTCTTCGGGTGTTGGTTCAGG
TGAATCCAGTGAACTTGATTCACCTAATCCCACATCCAGTGAAATGAAAA
GTTTACATCATCGATCATGTAGTATTGATAGAAATCGATCAACGTTCGAA
GATAATTGTTCTTGTCCTTCACAATCATCGAAACCTTTTCACAATCAGAC
TTCTATTTCAAATGATTCCGGATGTTACTCCATGAATTCGTCTATAGCTC
AGTCACCTTTGCTTTCTCCGACACAATTCTCAATGCAAACTTCACAACAA
GAAAAACAGACAGACCAAACGAAAGAGATTTTATTATGTCGAATTAAAAA
TCAACTTTATGATCCGAAAAAAGAAGAATTACTCGAACATTTAAAACGGA
TTTTATCTGATTCAGAATTTGAGAGTTTCACAGAACAAACATCGGACAAA
TCGGAATGGAAACCTTTAGAAACGGACGAAAATCGGATTATGCTTCCCAT
GCGAAGTGCTTTAAAGAAAACGAAATTAACTTTACTGGAAGAAATCCAGG
CTAAACATGCGTTGAAACGAATGGAGGCTAGACAGGAAACTCGTACGGTG
TGCCCATTAACGCGGAGTGAAATTGTGAAAATTATTCATCAGGTACGCTC
GTGTTTACGATTCACACAAAAACCTTTTCAATACAAATTTCAAGTacatc
ggaaaatcaaactgaaAGCTTTTCCACCTTTTGATAAAGAAACGACTGAA
AAGGACTGGGAACGAGAGAAAGTTCACTTAACGTTATGTTGTAAGAAAAT
GAAAGACGCTTCTGGAAAAGGAGATATCAAAAGGATATTAAACCTTCTAA
ATACAAACTCCTGTCAACATGTCAACGGTAGTGAATGCCTTAAAATGCCA
GCTTTTCATGACGCTTTCCAGAAGCAACATTACAGGACAGCTATTCTTCT
CTTGGAAGCCGGTACTGACTTACAAAAGTATACGGAACAAAGAATTTCCG
AATTTCATCGGATGCAAGAGATTgttcaaaagaataaaaaagattttgat
ttatgatgaaaatgaaagaagagaaatatatttatttatttatgacCGAA
ATCTTTCTTTATCTTTGCAATTTCAATTAATAAGGGAATCACCCACCTT
Run BLAST on NCBI

protein sequence of TCONS_00011047-protein

>TCONS_00011047-protein ID=TCONS_00011047-protein|Name=TCONS_00011047-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
MKSLHHRSCSIDRNRSTFEDNCSCPSQSSKPFHNQTSISNDSGCYSMNSS
IAQSPLLSPTQFSMQTSQQEKQTDQTKEILLCRIKNQLYDPKKEELLEHL
KRILSDSEFESFTEQTSDKSEWKPLETDENRIMLPMRSALKKTKLTLLEE
IQAKHALKRMEARQETRTVCPLTRSEIVKIIHQVRSCLRFTQKPFQYKFQ
VHRKIKLKAFPPFDKETTEKDWEREKVHLTLCCKKMKDASGKGDIKRILN
LLNTNSCQHVNGSECLKMPAFHDAFQKQHYRTAILLLEAGTDLQKYTEQR
ISEFHRMQEIVQKNKKDFDL
Run BLAST on NCBI

transcript from alignment at sc0000119:433282..441133-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011047 ID=TCONS_00011047|Name=TCONS_00011047|organism=Clytia hemisphaerica|type=transcript|length=7852bp|location=Sequence derived from alignment at sc0000119:433282..441133- (Clytia hemisphaerica)
GATTTATTTTACAGTGCGCGTGCAGACATAAACCCTGACATCATTTTGCA
GTTTTAAAAGGGATCTTACGCTCATCAGAGAAAGTAAAACCATTTAATGC
GAGAGCTCGCTCGTTTCATTTTTTGAGAAAGTGATAGGGTGTTTTGAAAC
AACAAGGAGATTGTATAACGCGTTTGGTTGTTTGACAAAACACGGAAAAG
ACTTTGGTTTTATATCAAAATTCATTGACTTTGTATCAGTCACTCATTAC
AGAATATTTTCATTTTTTACAACTTGAAGCTGGTGACCTTAAAGGATATT
CTCGAGGTTTTGATTTCGTTGGAAAGAGATTTTAAAGAGGAGATGGAAGC
AACCATGGGTTAGTGTTTTAAACCTTTACATCAGTACTCTTACTTTTATT
GGTATCTACTTCTATTGGATTCTCAAGGGAATCTTTTCTTTTTTCTTGTT
ATAGATATAAACTTTATCTACATCGTAGATAAGATTTGCGCTCAATTCTT
AGGACTTCTATGATTTTCAGTTTTTGTATTCCGATAATTTGAAGAGAATG
TAGGTTGATCTTTTTTGTTGAAATAATTAACTTATAGCTTGATATATTTA
CTTAACAGTCTGCTAAGTATCACCATGTTTGAAGCTTTTAATGCTTTAAT
GATTCTTTAATGACATCTTTCATCATTTTACATTCGCTATTACTGACTAG
CTCTGAAGCAATGTGGTGTAATTTGACTCTCAAATTCTTTTTTTGAAGAT
TTTTTTTTAAATCAAAACAAACAACTTGGCCGTTAAAATAGTTTTAATGC
TTTTCCTTTGCGTCAACACTTATTCTCTAACTTTCGCTTTTTTCATAATC
CTTGTACTAAATCAACAGATTTAAAGCGAGAATCCAGTGAAAATTGGCAA
CCGACCTTTATACTCCTCTAGCAAGAAAAGACATAGAAAAGCTTAAGCTT
CGAGTGTGTTCTACTCGTCAATAAAGTCTTGATGCCTTTAAGTTTAGAAA
TAGTAGAAATCTGAAAGTCATACATATGTATATCTGAACCCTAGATAAGA
CCAAGAATAGGATACCTTAAATTTCGCGAATTTAGCGATAGATGAGAGTT
TGAAAATTTTCGCGAAGGATTATATTTCGCGAAAAAGGCGAAATTCGCGA
AAATTCGTGAAATATAATCCCTGCGAAAATTTATACCCTTAAGGTAATAT
GGACTTAATTGAGATTGGAGCTTGAGTGACTTTTATGGCGTTGTTGTTTC
AGATGTTTAAAAAACTCCATAAAAATTTGGGACACTTTGTTTTGATATGC
TGAGATCTTTGATGATATGAGTGTTTGGGGTTGTTTGTAAATCTTATGAC
AGCCGGATATCCAGGATGAGTCATCGACAAACCGAGTTGCCTTTCAGTTT
AACCCCTGTTTGTTTTGTACTGGTTAAATTTCTTATCCTTCGTGAAAAAA
GTAAACATCCTAGGATTTTCCGCTTATAGTCTCCATTTTTGATCCATTTG
CTCCTTCCCTAAATATAATAAGGAGGCCTTCTTTTTCATATTATGTTCTA
GAACATTCTATTTTGGTTGGATTACATTAAGAAAGTTTTTCTCTTTATCA
TATGACGTACCCTTATTAATTTTAATCATCTATATAATTGTGATATCTTA
CCTACAATATCCTAGCCTTCGTTGGTTAGGTATGATTTTTTAGATGATAA
CGTACGCTTGTATCTAAAGTTCCCATGGAAATTGTGTAAAATAATGGCTA
ATCTGGGATTGCTACCCAATAAACTGTGAAAATTGCCCTATTTTGACAAC
ACCGCTAATTTACTGTTTTTCTATCGAATTACAACTTCGAGAAGTTCTCA
TATTTCATCACAACTCTAAAAAACAAGGTCAATTTTATAGAAAAAAATGA
ACAGAAATATAGTGCGGTAGCGTTAGAAGTATCCTATGCTATCTGCATGA
TACTTTTAAACCCATTTTCTCTATAGATTTGCAAGTTCTATTAGACTGAC
ACAGAATGTTTTCTCGTGACATTTAGTCCAGCTCTGTCGGTGGTGTCTGT
TCAGCATTTTGAATTAGGAGACTGATTTGTCAAGAAATGAGAGCAATTTC
AAAACCTTGGTTTTTGTTCTGGTAATTCGATTACTTAGATTTGCAAGTGA
GATAGTGGAGGCAACACGAACGGTTCAAAAAGGCTAATGAAAAGTCATCG
CGTGTTTTGGGTGTTTTCTCAAACATGAGCAGTTTATCTCTTTCGTTCAC
TAAATGTTAAACTTTTAAGCTGCGAGGATTTGTAATTTGTAATGATTCGG
GTTTGAGCTGTTCTTTGTGTGTTAAAATATTAATTTGTTTCCCGTAGACT
TTGGTTTCTTTTGAATCGGTTTGTAACCTTTCCTTGCTATATTTAACCAT
CGGGTTATATCTCTCGATAATCCTTTAAGACTGATCGCTTCATGAGGGAA
GAATTGTGTATTTTGAAATTTGAAATAACGGTCATTTTTCCTACACCACA
TACAAAATGACATACAGTATGACTGGAAAATGTGAAAGAAATTTCTACAA
GTTACAATCTAGCATCAAAAAAAGAATCACAAATCCTCGAGTTCCGTGCT
ACACCTGCCAAGGCTTGCGCTAAAAGCTACAGAAAAGAGATATCTATTTC
ACTTCACCCTGATGACGTCAAATCTCTGTAGTCATTGATTTACAAGAAAA
GCGAAACCAATCATCCAGTGACATTGTAAGTCCTAACCTAGCAGGTTGTC
TTTCTTAAATTACTTGTGGTTTCTTGGACCATCCTTACGGTCAGATTTGA
GTGCTTACACGTGTCGTCTTAGTATAGATGTACACGTCTTTTTTTTTTAA
GAAACACACTTTTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAA
ACATCTAAGAAACATGCTGAGGCTGAGAATGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTAGAAACATGTAAGAAACATTTAAGGCTCAAAAGGCCGATTT
CTTAAGAAACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAAA
GACGTGTAGATTCCATTTCTGACATCTTTAAGTTATACAAGCATGAAGAC
GAAGTTGGTGAACTGTGATCTTTGGAAGTTAGGATAGAATAAGTATCGAA
TCAAGCAAAGCCGATGAGATATGAATTACAACATGTCATTTGTGAAATTT
TGTAGGCGTTTAGTTAAGAAAAGGCGCCTTACAAAGGGAGAGTATTGTCA
ATGATCGCTTCCTGTTTAGGGTTTAACTACCATAGCAAAATGAGATTAAA
TTTTATGTTTTGTTCCTTGCTTGTCTTTTGATCCTAGGTATGTTAGCTTC
TTTTGAATCCTGAGTTCTCCTTAATGGGTTTATGCCATAGACATTGCTGA
GGTTAAATATACCAGGATAATCACAACGACGGATGAAAGATGTAATAGGC
TAGTGAAAGTACGAAATTTGATTGGTTGAAACTCACTAGTCTGTTAAATT
TTCGTTCACTTCACTATTATCTGACAGTGGATATGGGAATCGAGAAATGT
CAAACTCGTGCAGAATTTAGGATGATTAAATTTCTCGCAAATACAAGGAG
GCTAGCTATCTATTTATAGGATGTGGTATTTTAAGCTGTTTATCCAAAGG
ACTTATCGTGTATTTGCAAAAAAAAGGTTGCTTTGAAAAAAATTGAAATT
ACTTTCATTTGAAATGTTAGTATGACGGTCGAAAATCGTTCTACTAACTT
TTTGTAAGGAGCATTACGAGGGCTGCTTGTCTGATTCATTGGGCTTTATG
TAATTGCAAGAGCTTGATTTCAAGTTTGCTTGACCTACCCGTTAGATCGT
ATTGTATATAATTGACATGACATTATTCAAATGTCGATGCTATGAAATAC
ATAGCTTTCTTTTCTGTTCAGCAAGGAAAAATTTCTAATTTTGCAATCAA
CATTTTTTTGACAAGTTCAAAGATTCTTTGATAACAATTTTCTAGAGCAT
GTGTGAAATTATTTTTCTTGCTTATTAAATTGTCGGATGAATATATTGCT
TTTGAAATGAATGCAAGAACATTTTGCAGAACTTTCCTTGAAAACTGAAT
TACTCTTTCAACTGAACAAAAACATTGTCAGATAATATGTATGGTTGACT
TTAAAAAAAGTTGTTGATTTGTTGATTGAGACAGCCTAAGACTCAAACTC
ACGAACTCACTTAACAGGTCTTGAGCCATGTATACAAATGTTCCTCGTCA
CTTACATTTGCTGAATTCTTCAAACGAATTTCAGAAGTATTTGAGGAACC
TCATCGCATATTTTCTTTTTGTATTTTATGATGTAATCGTTCGTTTTTTT
TGTGCTCAACCGCTTATAGGCCGTTATAGCCCCCTCTCATAAGTTATCAT
GACCACAGATTGATCTTTACGGTGAAAAGTTAAATAAACTGATATTTAAG
TTATCGACTGAAAGTAGTTTTATCTTAGTACTACGGCTCGCATTGATAAC
CAAACGTCAGAAGCTGACATTGGATTTTTGGACCTACCGGGAGGTCCTTT
AATTTGACCGTTGTCCGTTCGTCTGTTACAAACTTTTCTCGGGATTGGCT
CATTAGTTTTTTTTAATTTTTTGCACAATGATACAAAATGGCAATGCCTG
AAAAGTGACGGAGCCCGATTTTTGAAAAAAAATNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGGAAAAT
TTTTTTTCGTCGTAAAATACGAATTTTCTTTTTTGGGGGAAATTCTGTTT
TACCATTTTCCTGTTAGCAGCTTTTCTCGGGATCGGCTTATTTTTTGTTT
TCATTTTTTGCACAACGATACAAAATAGTAATGCGTAAAAAGTGACGGAG
CCCGATTTTGAAAAAAAAATTTGGGGTAAATTTGGGCCAAAAACTACCTA
AAAATAAGGTTTTTTGGACTTGGTGCAAAATAGCTTCATTAGTTTTTCCT
GATTTTTGTCAGAAAGATAGAGTGCAAGGTACCTTAAAATATGGTTGAAG
TAATTTTTCTCTGAAAATTTTTTTTTCGCCATAAAATTTTCTAAAAAAGA
CGACCAAGTTACACAATGATAAAAGAAAATAAATCAGACTTTTTTGCATT
GTTCTAAAACTTATCGTGTTTGCTCAATACCAATAGTAAAATGTAGAATA
CCTACTTTTATCTGATTTTGATCAACAGGTAGGTCCATTCAGCATGTTGC
TTGTTTTTACTTAAAATGAGCGAACTACCTCAAGTTTAAAAGAGACTTTT
AAGTAGGCAGTTCCTACTCAGAACCTAAAAAATCAATGAAGTGTATTTTT
TCTTTTTTCAGAGCCAAAGAAATTTGATGTATTGCGACCACCAACAAGAT
GGGCAAGATGTTGAGATCACTCATCTTCAAAAACAAAACATCCAATCTTT
CCATCGAAGGAGTCAACAACAAAAACGAAATTATAAAAAACACAAAAATA
ACCGATTTAACGGTATATTTCAAATCCCTACAAACAAATCCAGTGAAATG
ACAGAATCGATTGGGATTTATGAACTGACATCCACTGAAGCAAAGGAGAC
TTTTGGTGAAGAGGGAACTTGTTTTTTCGTCGTGGCAAATATTCCTCAAG
ATCGCTCGCGAGTTGTCTCAAACTTTATCGAAGAAAATATTCCGGTATCT
ACACATAATACGGTTATCCCGCATTCTTTCACCCGGAAGAACCCGCATTT
GAGTGTTGAAACGAACGACCATTCGGTGTCGTCGGGNGCGGACGAACCCG
CATTTGAGTGTTGAAACGAACGACCATTCGGTGTCTTCGGGTGTTGGTTC
AGGTGAATCCAGTGAACTTGATTCACCTAATCCCACATCCAGTGAAATGA
AAAGTTTACATCATCGATCATGTAGTATTGATAGAAATCGATCAACGTTC
GAAGATAATTGTTCTTGTCCTTCACAATCATCGAAACCTTTTCACAATCA
GACTTCTATTTCAAATGATTCCGGATGTTACTCCATGAATTCGTCTATAG
CTCAGTCACCTTTGCTTTCTCCGACACAATTCTCAATGCAAACTTCACAA
CAAGAAAAACAGACAGACCAAACGAAAGAGATTTTATTATGTCGAATTAA
AAATCAACTTTATGATCCGAAAAAAGAAGAATTACTCGAACATTTAAAAC
GGATTTTATCTGATTCAGAATTTGAGAGTTTCACAGAACAAACATCGGAC
AAATCGGAATGGAAACCTTTAGAAACGGACGAAAATCGGATTATGCTTCC
CATGCGAAGTGCTTTAAAGAAAACGAAATTAACTTTACTGGAAGAAATCC
AGGCTAAACATGCGTTGAAACGAATGGAGGCTAGACAGGAAACTCGTACG
GTGTGCCCATTAACGCGGAGTGAAATTGTGAAAATTATTCATCAGGTACG
CTCGTGTTTACGATTCACACAAAAACCTTTTCAATACAAATTTCAAGTAC
ATCGGAAAATCAAACTGAAAGCTTTTCCACCTTTTGATAAAGAAACGACT
GAAAAGGACTGGGAACGAGAGAAAGTTCACTTAACGTTATGTTGTAAGAA
AATGAAAGACGCTTCTGGAAAAGGAGATATCAAAAGGATATTAAACCTTC
TAAATACAAACTCCTGTCAACATGTCAACGGTAGTGAATGCCTTAAAATG
CCAGCTTTTCATGACGCTTTCCAGAAGCAACATTACAGGACAGCTATTCT
TCTCTTGGAAGCCGGTACTGACTTACAAAAGTATACGGAACAAAGAATTT
CCGAATTTCATCGGATGCAAGAGATTGTTCAAAAGAATAAAAAAGATTTT
GATTTATGATGAAAATGAAAGAAGAGAAATATATTTATTTATTTATGACC
GAAATCTTTCTTTATCTTTGCAATTTCAATTAATAAGGGAATCACCCACC
TT

Coding sequence (CDS) from alignment at sc0000119:433282..441133-

>TCONS_00011047 ID=TCONS_00011047|Name=TCONS_00011047|organism=Clytia hemisphaerica|type=CDS|length=963bp|location=Sequence derived from alignment at sc0000119:433282..441133- (Clytia hemisphaerica)
ATGAAAAGTTTACATCATCGATCATGTAGTATTGATAGAAATCGATCAAC
GTTCGAAGATAATTGTTCTTGTCCTTCACAATCATCGAAACCTTTTCACA
ATCAGACTTCTATTTCAAATGATTCCGGATGTTACTCCATGAATTCGTCT
ATAGCTCAGTCACCTTTGCTTTCTCCGACACAATTCTCAATGCAAACTTC
ACAACAAGAAAAACAGACAGACCAAACGAAAGAGATTTTATTATGTCGAA
TTAAAAATCAACTTTATGATCCGAAAAAAGAAGAATTACTCGAACATTTA
AAACGGATTTTATCTGATTCAGAATTTGAGAGTTTCACAGAACAAACATC
GGACAAATCGGAATGGAAACCTTTAGAAACGGACGAAAATCGGATTATGC
TTCCCATGCGAAGTGCTTTAAAGAAAACGAAATTAACTTTACTGGAAGAA
ATCCAGGCTAAACATGCGTTGAAACGAATGGAGGCTAGACAGGAAACTCG
TACGGTGTGCCCATTAACGCGGAGTGAAATTGTGAAAATTATTCATCAGG
TACGCTCGTGTTTACGATTCACACAAAAACCTTTTCAATACAAATTTCAA
GTACATCGGAAAATCAAACTGAAAGCTTTTCCACCTTTTGATAAAGAAAC
GACTGAAAAGGACTGGGAACGAGAGAAAGTTCACTTAACGTTATGTTGTA
AGAAAATGAAAGACGCTTCTGGAAAAGGAGATATCAAAAGGATATTAAAC
CTTCTAAATACAAACTCCTGTCAACATGTCAACGGTAGTGAATGCCTTAA
AATGCCAGCTTTTCATGACGCTTTCCAGAAGCAACATTACAGGACAGCTA
TTCTTCTCTTGGAAGCCGGTACTGACTTACAAAAGTATACGGAACAAAGA
ATTTCCGAATTTCATCGGATGCAAGAGATTGTTCAAAAGAATAAAAAAGA
TTTTGATTTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006191XLOC_006191Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011047-proteinTCONS_00011047-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011047-exon-sc0000119-1575043694:440776..441133TCONS_00011047-exon-sc0000119-1575043694:440776..441133Clytia hemisphaericaexon
TCONS_00011047-exon-sc0000119-1575043694:433282..434872TCONS_00011047-exon-sc0000119-1575043694:433282..434872Clytia hemisphaericaexon
TCONS_00011047-exon-sc0000119-1510915933:440776..441133TCONS_00011047-exon-sc0000119-1510915933:440776..441133Clytia hemisphaericaexon
TCONS_00011047-exon-sc0000119-1510915933:433282..434872TCONS_00011047-exon-sc0000119-1510915933:433282..434872Clytia hemisphaericaexon
TCONS_00011047-exon-sc0000119-1491911889:440776..441133TCONS_00011047-exon-sc0000119-1491911889:440776..441133Clytia hemisphaericaexon
TCONS_00011047-exon-sc0000119-1491911889:433282..434872TCONS_00011047-exon-sc0000119-1491911889:433282..434872Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:433282..441133 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.114212	0.190997	0	0	1.2339	0	2.44396	0.337316	0.93556	1.15612	4.72901	6.93548	0.24585	0	20.4788	22.6509	6.32136	3.6676	7.39265	5.62517	2.31391	4.65467	3.7872	1.21803	0.698952	0.62659	0	0.737643
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011047 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top