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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011038 ID=TCONS_00011038|Name=TCONS_00011038|organism=Clytia hemisphaerica|type=transcript|length=463bp
GTTTTTAAGCTAgtgttttttgaagaaaattatgccatgatttgaaaaat
caaaatgaaaattacatCAAGTATTTTGTTGCTTCTGGTTTGCATGTATT
CCTTAAATGGAGAAAAATCAACATCCAGATGTTCGAAAGGATGCCCTTTC
ATATACGAGCCACGATGCGCTTCGAACGGTCAAACGTATGATAACGAATG
TTTGATGACCATTGCCCAATGTGAATTAGGACAATCTCTTGAACTTATCA
GAATGGGTCGTTGTGGAAATGAAGAGAATGAAAACGAAGAATCTTTACTG
ACAGCGAAGAATTGAATGAGCTCTTTGTATACAAAGAAAAGAagtaacaa
aaaaacaaaatcatcttgaaatttattttatctttttccaACCCGATTTC
GCACTAACACCCACGAAAACCATTTCATGTAGAGACAAACTGTAAGAAAT
TTATCGCGCATGT Run BLAST on NCBI transcript from alignment at sc0000119:248864..250908- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011038 ID=TCONS_00011038|Name=TCONS_00011038|organism=Clytia hemisphaerica|type=transcript|length=2045bp|location=Sequence derived from alignment at sc0000119:248864..250908- (Clytia hemisphaerica)
GTTTTTAAGCTAGTGTTTTTTGAAGAAAATTATGCCATGATTTGAAAAAT
CAAAATGAAAATTACATCAAGTATTTTGTTGCTTCTGGTTTGCATGTATT
CCTTAAATGGTAGGCAGTAATACGCTTTCATGGCCCCATCACTTGAGGTA
GGGGGCAAGAGACGACTAATCCTTTATTCTTTACCAAGCAAAGTTAATTT
GAACTTTTTTAACTTTTCAATTATTTTTCCACTAAATCTTCAATTTCTTT
ATTTGCCACTTTCCAAGTGAATCACAGCTCCGAGTTATAATTGAATTCCG
ACCTCGATACATTACTGGGTCACTCTTTCTCATGTCTATCTTGTTCGGCC
AATTCTTCTGATAAAAAATATGGTAGCCGAAAAACAGGTGAAGTATATAT
ATGATACATGTTTGCAAAACTGAAGGAGCGTTTCTTTTCATTCATTCCGT
TCATTCGATCTGTTTTAGGAGAAAAATCAACATCCAGATGTTCGAAAGGA
TGCCCTTTCATATACGAGCCACGATGCGCTTCGAACGGTCAAACGTATGA
TAACGAATGTTTGATGACCATTGCCCAATGTGAATTAGGACAATCTCTTG
AACTTATCAGAATGGGTCGTTGTGGAAATGAAGAGAATGGTAGGTCTGAG
CCTTTAAGTCAAAGAATTATCAGAAAGAGCATCGTTATTAAAATTATACC
ATACCAGTGTCGTCTGAAACGACTCTGCGAGGAGATATTTTTCTCGCTTC
GCTGAATAAGGTCTAAACCAGGCTCTATTTGATCTATCAATCAAAACAAA
CTTGCGAAAACGAAAGTGGTGACACACAGACATACAGAGCACTGCTTTTA
TATATAGATGTCCTCATACCATTCTCTTTGTGTTTTTTTTTAGGCTGGAA
ACGTATGATCTGTTGAGAATCATTCTTAATTTTGATAAGTTCACGGTGAT
AGATTTTAAGAATTTTCATTTTTTCGACAGAGAATGACAGTTTTGGACCC
CGACAAAATTTCTTCAAACTCTTGAAATAGAATTCCCAGTAAAACGGCTT
TGAAATTTCAGTTAAAACTTCACTAACGCAGTTTTACACCTCATGATGTA
TAGCTCTGATGAGTCTCGATAAGCAATGCAATTAACGCAGCTAATTTCTG
AGATAGAGTCTTTTCTTGAGGCCAAAATCAAAACTTTCTAAAAGAAAAAT
ATAAATATTTTGCACTCACTTACAAGTGGTGCAGCGTGCTTACTTCGAGA
TACTTCAGTTGTTCTGTCTTCGTGTGTTTTCCCATATTTCCCTCTGTTTG
TTTTTAACTTTGCTAGATTATATTCTACGTCCTCTAACCACCTTCCATTT
GTGCGTTATCAAACGTATGGTCTAAAATAGAAAATAAAGGTTGAACTTAT
AGTCTTTGGTTTTAATTTGTGTGCGATTTTGTTTGCTTGAAGGTTTTGAT
CTCTGCTGATTGTGGTAAGGTCTTTCATGTGGGGGCGTACGGTATTTCGG
TATTGCGGAATTTCGGAATTTCGGAAATCAGGCAAAATTCCTTCGGTATT
TCAGAATTCTGAAATTGTTTCGGTATCGGAAATCCATGGATTTTTCTTCG
AAATTTCGGTATTATAAAGTTTTTATCCCCCTTTTTCGGAATTCATACAT
GAAAAATCAAATTTGATGAAAGATTAGTTAAATCGAGGAAAAATACCCCA
AAAATTCGATATCGGAATTGCAAGTATTTTTTTACAGAATTTCGGAAATT
TTGGCAAAATTATGCGGTATTTCGGAAATCGCAAACCCCGTACGCCTCCC
CCTTTCATTGCAGTATGTTGCGTATGGAATGCTTCTGATTTGATCTTTAA
CTTCTATTTCAGAAAACGAAGAATCTTTACTGACAGCGAAGAATTGAATG
AGCTCTTTGTATACAAAGAAAAGAAGTAACAAAAAAACAAAATCATCTTG
AAATTTATTTTATCTTTTTCCAACCCGATTTCGCACTAACACCCACGAAA
ACCATTTCATGTAGAGACAAACTGTAAGAAATTTATCGCGCATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011038-exon-sc0000119-1575043694:250800..250908 | TCONS_00011038-exon-sc0000119-1575043694:250800..250908 | Clytia hemisphaerica | exon |
| TCONS_00011038-exon-sc0000119-1575043694:250270..250440 | TCONS_00011038-exon-sc0000119-1575043694:250270..250440 | Clytia hemisphaerica | exon |
| TCONS_00011038-exon-sc0000119-1575043694:248864..249046 | TCONS_00011038-exon-sc0000119-1575043694:248864..249046 | Clytia hemisphaerica | exon |
| TCONS_00011038-exon-sc0000119-1510915933:250800..250908 | TCONS_00011038-exon-sc0000119-1510915933:250800..250908 | Clytia hemisphaerica | exon |
| TCONS_00011038-exon-sc0000119-1510915933:250270..250440 | TCONS_00011038-exon-sc0000119-1510915933:250270..250440 | Clytia hemisphaerica | exon |
| TCONS_00011038-exon-sc0000119-1510915933:248864..249046 | TCONS_00011038-exon-sc0000119-1510915933:248864..249046 | Clytia hemisphaerica | exon |
| TCONS_00011038-exon-sc0000119-1491911889:250800..250908 | TCONS_00011038-exon-sc0000119-1491911889:250800..250908 | Clytia hemisphaerica | exon |
| TCONS_00011038-exon-sc0000119-1491911889:250270..250440 | TCONS_00011038-exon-sc0000119-1491911889:250270..250440 | Clytia hemisphaerica | exon |
| TCONS_00011038-exon-sc0000119-1491911889:248864..249046 | TCONS_00011038-exon-sc0000119-1491911889:248864..249046 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000119 | supercontig | sc0000119:248864..250908 - |
Blast
The following BLAST results are available for this feature:
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