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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011012 ID=TCONS_00011012|Name=TCONS_00011012|organism=Clytia hemisphaerica|type=transcript|length=335bp
agtttttaataaaaatacaagaaatgttttcaagaaaaacctGCACCTAA
AATCATAGATACaagaaaatagtaaaaatattaCACACCTCTATTATAAA
CAACTTTAAAAATATCACACAAAATATAtattatgaactttaaaaaatat
tacacaaaaatatatattatgaactttaaaaaatattaactaTGGAACAG
AAATCACTCCACGAGAATTAAAATTTAGGAGTATGCATATTTTAAGTTAT
AGACCTGGTTGGACCCCCTCCCTTTTGAAACATTTCCGTCGGGGAGGTAT
ACTTCCTGTAACTGAAAGTAATTACCTAGTAATGT Run BLAST on NCBI transcript from alignment at sc0000119:474784..476114+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011012 ID=TCONS_00011012|Name=TCONS_00011012|organism=Clytia hemisphaerica|type=transcript|length=1331bp|location=Sequence derived from alignment at sc0000119:474784..476114+ (Clytia hemisphaerica)
agtttttaataaaaatacaagaaatgttttcaagaaaaacctGCACCTAA
AATCATAGATACaagaaaatagtaaaaatattaCACACCTCTATTATAAA
CAACTTTAAAAATATCACACAAAATATAtattatgaactttaaaaaatat
tacacaaaaatatatattatgaactttaaaaaatattaactaTGGAACAG
AAATCACTCCACGAGAATTAAAATTTAGGAGTATGCATATTTTAAGTTAT
AGACCTGGTTGGACCCCCTCCCTTTTGAAACATTTCCGTCGGGGAGGTAT
ACTGCCTGTAACTGAAAGTAATTACCTAGTAATGTTTTTTTTGACGTagc
ataaattttatttttcaaagaccTTAGCTGTCTTTACTGAATAGTATTAT
GATTAATCCAAAAGGTTTTCAAATAGTGTTAAGAATAGATACGTATATTT
ATGTATCAAAGTATAAAAAGTAATTCTTGGGTAACACATAAGAATAACAC
ATAAGAATTTTAGGGCTGAAGCACTATCGCAactaaaaacaatcaaatac
gAAATCCCCACCTAAATAttaaaagggaaatatttttatcatcCCCATTG
GTTCATTCAATTAAACTAACAAGTGATCAGGTCATTGGCActaaggtaca
cgtttttttttataagaacgtcaaaaattttcgaagccttcggatgttct
tagttttttggatttgaagcctaaaaatgttcttaaaatgttcttatttt
cagcattgtttgagcattttgatgtaatttcttaagaaattgcatgtttt
taagtttccaaagccttagtatgttcttaaatttttgggcctcgaagctt
atgttcttatatagtttgttcttataaaaaaacgtgtattacggTTGGAA
GCAAGAGGTTAAACTTATATCAGAGCCCCTTGAAATAATTAACAAGTTTA
CGAGAACAAAATTAAAAGAGCAACTTGAAAATCATTCAGAAGTGTTCAGT
CTGTGTTAACGTTCAATGACTTTGGGTCAATATACACTCATTCTATTGCT
TTTTTACTTGTTGAACAGAATCAATTGGATTCACAGAATTGGCGGTGGAA
GGAGCGCTTATGATACTTGGCAAAACGTGTCTACGAACNAAAATATTaca
caaaaatatatattatgaactttaaaaaatattaactaTGGAACAGAAAT
CACTCCACGAGAATTAAAATTTAGGAGTATGTATATTTTAAGTTATAGAC
CTGGTTGGACCCCCTCTCTTTTGAAACATTTCCGTCGGGGAGGTATACTT
CCTGTAACTGAAAGTAATTACCTAGTAATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011012-exon-sc0000119-1491911889:474784..475064 | TCONS_00011012-exon-sc0000119-1491911889:474784..475064 | Clytia hemisphaerica | exon |
| TCONS_00011012-exon-sc0000119-1510915933:474784..475064 | TCONS_00011012-exon-sc0000119-1510915933:474784..475064 | Clytia hemisphaerica | exon |
| TCONS_00011012-exon-sc0000119-1575043694:474784..475064 | TCONS_00011012-exon-sc0000119-1575043694:474784..475064 | Clytia hemisphaerica | exon |
| TCONS_00011012-exon-sc0000119-1491911889:476061..476114 | TCONS_00011012-exon-sc0000119-1491911889:476061..476114 | Clytia hemisphaerica | exon |
| TCONS_00011012-exon-sc0000119-1510915933:476061..476114 | TCONS_00011012-exon-sc0000119-1510915933:476061..476114 | Clytia hemisphaerica | exon |
| TCONS_00011012-exon-sc0000119-1575043694:476061..476114 | TCONS_00011012-exon-sc0000119-1575043694:476061..476114 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000119 | supercontig | sc0000119:474784..476114 + |
Blast
The following BLAST results are available for this feature:
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