TCONS_00011004 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011004
Unique NameTCONS_00011004
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2987

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011004 ID=TCONS_00011004|Name=TCONS_00011004|organism=Clytia hemisphaerica|type=transcript|length=2987bp
taaaagtaaaaaaagacaaaatctcATAATGGCCACTTTATCAGATGAAG
AGTTGAATTCCGCATCCAGTGAAAGTGAGGATGATCTTCCAACACTATCA
ACAATAATGACGAAATCCCCTTCACGAAAACAACCTGCTATCAAAACTGC
TGATGAAGTTCTCACTCCAAGACGTACAAAGAAACATACTGACAATGATG
AGCTGGTGTTGGGATCTCCTTTGCGTTCACCAACAACTAGTAGGGTAAGA
AACACGAAATCGAAAGCTAGATCTCTCAATGATTTGCTGAAAGACAAAGC
CAAGGATGATGACATTCAAAGTAAAGTTGATGatataatgaaaatgaaag
AAATGGAGTTGGATGACTATGGTGAGAACAGTGAAGAAAAATGTGATAGA
AATGCAATAGGCGAGCTATACGGTGATTATTCACAAGAATTCTCACAAGA
TGTTGATGTGCTAGATGATTCTAATGACTCCATTGAAGTGAAATTCAGTT
ATGCATTATCAAGAGATTTCCCAGACACCTTCCCTGGAATAGAATTGTTT
GTGCGTCCTGCAGACGATGTTGATCCAGTGATGCTCTTGGAAGGACTGTT
GGAATATTTCGAAGATGAATCAATTGGGATATCCAAAGCTGATCTCGTCG
ACGAAGATTTATCAAGGGAAAATGTTCATGAAATCATTGGGCAAATAACT
TATCTTGTCAAACAGAAATGAAGGAGCGTGATTTATGGTGCAAGATATGG
AAAATTTTGTGCTTTGTTGAAGATTGTGAAGTTTGTTATGCTGCTTATGA
ATGTCTTTCTTCTCATTTCAAGATGTGTTCCaaaaacagCATAAGTCCAC
CATGGATCCCATCAGTCATCGAGTTACTGGAGAGTATCATTGGAATCGGT
GCTTCACCCTCGATTGTCTCCACCATCGAGTATGTTTACCCTGAGCTCGA
CACCAGTATATTCGAATCACTCGATTGTTCGGGTGAAGAGCAGTTCGTCA
ACGCTCGAGCTATACGTAAAGATATTCATCGCAGGCTCTACACTGTACAA
TTTATCACGAAACTTTTCACAGTCGCCGTACAGACGTTCCCAGGACAATA
CAATGTTGATGAACTTAGAGCTATTTTCATGTTGGTTTCTCATTTATCTG
TTGATAAGCTTTTTCAATCGGTTTTGATTGATTTCAAAGTGTTATTGGCG
TCTATCTTGGATACCTACAATGATGAGGCTATGTGGGAGACGGAGGTTGA
AAACTTGGTCAGAGATTTCCTCTCGCTAGATTGGCATCATCGTAATTTAT
TACAAGGTGTCGAATCTGTCTTAACATCAACAAAAAGAGGATTTCATTCA
GTTTCATTTTCAACAAGTTCTCGCTATCAATGTTGCcatcaaaataatca
aagatcGCGAAAaaaagaaccaatcagaaggcGGCGAGAGTGAGACGGAT
GACATGGATGAAGAGAAAGGTCGAAAAATCTTCTCAAATTACCCTGTCAA
ATTGAAGTTGGTGCATCAAGTTTTGAATCACATCAAAAGTAACCTCAAGG
ATATTGACGAAGACAACGATGACACAGATTACCACGAAATCTCCACCGTT
TTGTTCCTCATTGGGTTGTGTTCTAAAGTTGAACTACAATGCAATCCTGA
AAGGGCTAAGATGTGCAAATCGATCATCAACACTCTCACATTCGTGAACG
ATGCTATCAAAGAGTGTATGGGCAGACATATGGATCGCACCAAGCTGAAG
AATCAAGTGATTCGGTTGAGCAACAAATTCGAATTGATGAAGTCACGTTC
AGAATCACAAACCCAGagTTATTTGAGTTCATATTTCGATTGTGAAGTTG
ACAAAATGGATGAAGAAGAGGCAGAAGAATAAACAGGACATGCGCATTGT
GTCCTTCGTGGTTGGCGATTTCAAATGGGTTCGAACTGAAATTTACCTCC
TGGACATTTTACCCCTTAGGTTACgacattgaaattgaaattcaccccat
ggacattTCAGAATTTTCTCGATACCTGTTGACAATGCATATTCCATCTG
ATATGATAAGTTATGAAGGTTGTTTCCGGATTTTATATTCCCTCACCTTC
GAAAAGGATTCACTGATAATAATTGAGGAATCAATGCAATTTTCCAACAT
ATTGCCTTAAACGGCCTATTGCGAAGTGAAACGAAACTGTCTACCAAACC
CCGACATATCTTCAAGGGAAGTCATCAAAGCGATGTAATTCATATCCTCG
TATCTTCGGAACATTGAAGTCGTCTGAGAATCTACATAATGAGCTGACTC
GGCTTCCACATTATCACGTGTTGTTGTGATCAAacctttgaatagattta
tctACAAACTAAATTCTCCACCTGAGTATTGTCTTTTGAACTATAACATG
tccccatttttcttttgataacatttgtgcttctcGCTTCtcatttcact
tttattgatagaaagaaaaatggggtggagacacgagaaagcgtttcagg
ttagtgggatggagcatgttgcattgcaccaacgcgaaaaaaacttctcg
tgtccccgaGCCTTAAGCTGCGAATTCTAGATATTTGCTCCGCCTTGATA
CAATTGTTCCATGTTTAGCGGACACAACGCTGTATTGTTGTAACAGTTTA
TAAACAATGGAAAAATtctcaacattttcattttattttataaatatatt
tttaaaaagattttataaaaaGAGAACTATTTATTTACAGTAATTATAAA
AAGATATCACAAAGAatacataaaaaaatattttgatacattACAAAACT
ACAGGTTGGGCAAAAAGAATATGGTCAGAAATTGTGCTACTTGCAGAGGA
ATTAGTGCCATAGAAACATTTCTCTTTTGTTAGTTGCGCTGGAAACTTCG
TCCTAAATTTTTACTTATNATAGAAACATTTCTCTTTTGTTAGTTGCGCT
GGAAACCTCGTCCTAAATTTTTACTCATGTCAGATAC
Run BLAST on NCBI

transcript from alignment at sc0000119:369225..384021+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011004 ID=TCONS_00011004|Name=TCONS_00011004|organism=Clytia hemisphaerica|type=transcript|length=14797bp|location=Sequence derived from alignment at sc0000119:369225..384021+ (Clytia hemisphaerica)
taaaagtaaaaaaagacaaaatctcATAATGGCCACTTTATCAGATGAAG
AGTTGAATTCCGCATCCAGTGAAAGTGAGGATGATCTTCCAACACTATCA
ACAATAATGACGAAATCCCCTTCACGAAAACAACCTGCTATCAAAACTGC
TGATGAAGTTCTCACTCCAAGACGTACAAAGAAACATACTGACAATGATG
AGCTGGTGTTGGGATCTCCTTTGCGTTCACCAACAACTAGTAGGGTAAGA
AACACGAAATCGAAAGCTAGATCTCTCAATGATTTGCTGAAAGACAAAGC
CAAGGATGATGACATTCAAAGTAAAGTTGATGatataatgaaaatgaaag
gtaaatggatttttaatttttgataaaatcattttaTTTACATTGTTTGG
GGGGTTTGTCTTGAGGTTCCCTTCGACTTAGACTACgccatatcttcctt
cgtttcgagcgtgaAAGTCCTACTCTtcggatatgagcactgcttttgtt
ttgaatattgaaattctccggataaatcgcatgcacactgaggttttaat
gaaacaattgAGAGTTTCGAAatttaagccaatcagctgtgttttaaaca
ttcttttatttgaaatatctATTGATAAGCATCTTTTGGGAAAGTTGtct
tatgtttaaacctattaataagaaattcccggtgggggctaCTAGTGGCT
GCCTATaacagtgcctatagaccaagagtaaggcctgtGTAGACTACCTT
GGACAGTGTAAAGAGGTTTAAAATTAGAGTCAAAATAACAGGCATAAGGC
GGgtaattacaaaatttctttactcaTTTTTCTTTGCTCTGATATTGATA
TCACACAAAATGTTCCGATAGGTTGTTATTTCAGTCTGTCAAAGTTTAAG
GTTCGTAAGAATTGCGCCATTTATCAAAGTTTTGGTGCATTACACCTATC
ATctttgtaagattttttttaaagaagcaaTTTAATTGGGTACAACGAGt
acctttaaaggttttgttttaaataagaaagatatcgtttgcttactcat
caattttgatttacaagccttttgatattgaattgacacgaatgtggagc
aagattgttaagaaagaggaaaagaaaaacattttttgcttagatcagca
caatataacaatgggcagacactgtcctgatataaaaaacatgtgtctga
tatgaaaagggatatttatgtaaaaataaaacctttaaatggaATTCCTT
ATTGGTTGAATTTGACATAAATAAGATTTTACAATTTCTTCTATCTTCGC
TTTATTTACAACTTTCTCTGTGTTTATTGTCTTTGCTTTAGAAATGGAGT
TGGATGACTATGGTGAGAACAGTGAAGAAAAATGTGATAGAAATGCAATA
GGCGAGCTATACGGTGATTATTCACAAGAATTCTCACAAGATGTTGATGT
GCTAGATGATTCTAATGACTCCATTGTATGTAAAATGCTTATACTCGTCT
TGTCATTCTGAATCTTTTAAATCCTTCCATGTATAGGGTTCTATGTATAG
GGTGTTTCATATTTACCTTTCAAATTACTTCTTTGTGgggttttctttat
tttaaaattgtatgCTACCAATATTTACTACACAGGAAAAGTGAGTATAT
CCAAGTGTGAAAAGTGCATTCCACACCTTGGAACATGAATAATCTTCCCG
TCTGGGTGGATTTTTCAACCTTCAAAGGTGTGAAATtcacttttatttac
tttttcctGTGTTATTTACTAGGAAGTGAAATTCAGTTATGCATTATCAA
GAGATTTCCCAGACACCTTCCCTGGAATAGAATTGTTTGTGCGTCCTGCA
GACGATGTTGATCCAGTGATGCTCTTGGAAGGACTGTTGGAATATTTCGA
AGATGAATCAATTGGGATATCCAAAGCTGATCTCGTCGACGAAGATTTAT
CAAGGGAAAATGTTCATGAAATCATTGGGCAAATAGTAGGGGGTAAATAT
GTAATCGCTCTTATCTTTAAATATTCATCATTTAGAGTCACACATATATC
TATCAAATACAAGAGATGTTAAATTCTGAAAACACTATATTTGCTTTTCG
TGGCTCATTTTTTATCAGTTGACATGAAGGTACTTTCTCCACAAAATCAA
AAGTGATGTCTCAAAAAAGTAGTAAATTGTAGAGTTGCATTAagttgcaa
taaaaaaataaaaaaatatcaaaatataataacTGCTCcttttttcaccg
ttcaacacattaaagggacataacagtacttgtatgcagcggatacaaaa
tcaaaacaaatgtcacatgtcaaaaatcgaactaattatggctaattttg
attgttcaattgttttacaagtttgttttggactagccagtaccttccca
caaaccaaattttttctttgttttatggtttgttttattcaagctccaaa
taaaaagaatcgatgaggtgaggttgcgtgtcttttctgaatttcaacga
ctagaagcttcttccctcaaaaaacgttgtttaattttacaacctttttt
aggtttttgagaatccatccaacttttttgactaaatgatatttcatagt
aacattaaacatgAGAACATATAAATTAatgagcatttccaaaaatgcaa
taaacagaaagaaaaataaatacaatcccgcacgggtcagacatacagaa
atctgtatgtctctccttgcgattttaggtgaagaaaaaagggcgttgga
agaagcttctagtcggttattttccttttctctcacgcgcgctgaatact
taattagtgtttacattatttgattgacagttttattataagtaataagc
gactagtttactagtctactttaatgtccctttaagttgCAATAGATTGC
ATTCCTTAAAGGTTCAGCAAAAGGttgactttgttttttttatgaagcAG
AAGAATACCCTAAGACTTTTATAACAAAATGTTGTTATCTTCTTAGACTT
ATCTTGTCAAACAGAAATGAAGGAGCGTGATTTATGGTGCAAGATATGGA
AAATTTTGTGCTTTGTTGAAGATTGTGAAGTTTGTTATGCTGCTTATGAA
TGTCTTTCTTCTCATTTCAAGATGTGTTCCGTAAGTTACCATAATAGTGA
TAAAAGTTCTGTAGGTTATTTTGTCTCGAACTCAAATTCACCAAAACATC
AAGAATATGTGCATAATTTgctttttaaattcaattctCCATATCAGACG
AAAAACCTGCTTTGACAACTGGCATAATAAAGGACTTTTTACAATGTGTT
TTGAACCCAAGCATTACATATCAGGGTCTTAAAATTTCCTAAGCTTCTTC
CATCGAAGGTGCTCGAAATCAACCAAACCCCTACCAGTTGTATCTTGAAG
ATTACATGCTTTTCTTAATCAAGTGATAAGGCTAACACGTGCTTAAGATT
TTATTGTTCTTAAAAAGTGGAGCTTTTGTATTCGGATTCAATTTTTTATC
CTAGGTGTGTTTGTATTCGTCAGTTATTCTTCAAAAAAGCTTTGtacatt
tttcagaaaaacagCATAAGTCCACCATGGATCCCATCAGTCATCGAGTT
ACTGGAGAGTATCATTGGAATCGGTGCTTCACCCTCGATTGTCTCCACCA
TCGAGTATGTTTACCCTGAGCTCGACACCAGTATATTCGAATCACTCGAT
TGTTCGGGTGAAGAGCAGTTCGTCAACGCTCGAGCTATACGTAAAGATAT
TCATCGCAGGCTCTACACTGTACAATTTATCACGAAACTTTTCACAGTCG
CCGTACAGACGTTCCCAGGACAATACAATGTTGATGAACTTAGAGCTATT
TTCATGTTGGTTTCTCATTTATCTGTTGATAAGCTTTTTCAATCGGTTTT
GATTGATTTCAAAGTGTTATTGGCGTCTATCTTGGATACCTACAATGATG
AGGCTATGTGGGAGACGGAGGTAGGTTCCTTGAGGCTTAAGCTCCCTATA
TTTATCTCAGTTTCACTTCTCGTAGACATTAATATATCAACACTGTTACT
GAGAGGAAATTAGGTCCTGGTCTATGCTGGTCAGCTGTATTGTCGAGAAG
GGAATTAATTAAATAAGTTGACTGGTACAAAAGCTAAAGTAAAACTTGTT
TAACTTGAATGCCTGAACAAGAATACTGGAATGTTTAATCAGTATAAATT
TATAGATCTAAGAAAGGGGACGCGGGGGTTGCGAGCACCGAACAATCAAA
GCATTTTTCTTTCATCGCTGAAGCCGACagcaaaaattgttaaaatcaaA
TCTAATCCGATCCGTCATTTTATTCTTCAAATATCGAAAAAAATACCGAC
AGAAAATAGGGCTAATTTCTCAGCGTCCTTGTGCGTCCGTCTTACGTTTT
AATAATCTTTATTCTATGTAGGTTGAAAACTTGGTCAGAGATTTCCTCTC
GCTAGATTGGCATCATCGTAATTTATTACAAGGTGTCGAATCTGTCTTGA
CATCAACAAAAAGAGGATTTCATTTTCAACAAGTTCTCGCTATCAATGTT
GCcatcaaaataatcaaagatcGCGAAAaaaagaaccaatcagaaggcGG
CGAGAGTGAGACGGATGACATGGATGAAGAGAAAGGTCGAAAAATCTTCT
CAAACTACCCTGTCAAAGTAAGttgaaagagaaattttttgTCAGTGCAC
ATCGGTGTTAACTCCTAGTCCTTCTCAAAAACTGATGAAAGTCTGAGATT
CTTTTTCGTAAATTATTGCTGGTCTAATTANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCAATTGTCTCC
ACCATCGAGTATGTTTACCCTGAGCTCGACACCAGTATATTCGAATCACT
CGATTGTTCGGGTGAAGAGCAGTTCGTCAACGCTCGAGCTATACGTAAAG
ATATTCATCGCAGGCTCTACACTGTACAATTTATCACGAAACTTTTCACA
GTCGCCGTACAGACGTTCCCAGGACAATACAATGTTGATGAACTTAGAGC
TATTTTCATGTTGGTTTCTCATTTATCTGTTGATAAGCTTTTTCAATCGG
TTTTGTTCGATTTCAAAGTGTTATTGGCGTCTATCTTGGATACCTACAAT
GATGAGGCTATGTGGGAGACGGAGGTAGGTTCCTTGAGGCTTAAGCTCCC
TATATTTATCTCAGTTTCACTTCTCGTAGACATTAATATATCAACACTGT
TACTGAGAGGAAATTAGGTCCTGGTCTATGCTGGTAAGCTGTATTGTCGA
GAAGGGAATTAATTAAATAAGTTGACTGGTACAAAAGCTAAAGCAAAAAA
CTTGTTTAACTTGAATGCCTGAACAAGAATACTGGAATGTTTAATCAGTA
TAAATTTATAGATCTAAGAAAGGGGATGCGGGGGTTGCGAGCACCGAACA
ATCAAAGCATTTTTCTTTCATCGCTGAAGCCGACagcaaaaattgttaaa
atcaaATCTAATCCAATCCGTCATTTTATTCTTCAAATATCGAAAAAAAT
ACCGACAGAAAATAGGGCTAATTTCTCAGCGTCACTTGTACGTCCGTCTT
ACGTTTTAATAATCTTTATTCTATGTAGGTTGAAAACTTGGTCAGAGATT
TCCTCTCGCTAGATTGGCATCATCGTAATTTATTACAAGGTGTCGAATCT
GTCTTAACATCAACAAAAAGAGGATTTCATTCAGTTTCATTTTCAACAAG
TTCTCGCTATCAATGTTGCcatcaaaataatcaaagatcGCGAAAaaaag
aaccaatcagaaggcGGCGAGAGTGAGACGGATGACATGGATGAAGAGAA
AGGTCGAAAAATCTTCTCAAATTACCCTGTCAAAGTAAGttgaaagagaa
attttttgTCAGTGCACATCGGTGTTAACTCCTAGTCCTTCTCAAAAACT
GATGAAAGTCTGAGATTCTTTTTCGTAAATTATTGCTGGTCTACTAATTT
ATAAAGTCtgaaaattttcgtttttcgaAAGGAATTATCTATTCCCTATC
TTGATAAAAATCAGATAAATATTAAATAGCGCTCCAAAGTCCGAAGTGCT
GCTATGCATAAAATGTACCCGAGCTTTTGAGGAGGATGGCTAAATCAATT
TTTGAGAGCAAAATGTATCAAAGGCAAActctttatttattttaaattta
ttcaaTATTTGATGTTTTCAGTTGAAGTTGGTGCATCAAGTTTTGAATCA
CATCAAAAGTAACCTCAAGGATATTGACGAAGACAACGATGACACAGATT
ACCACGAAATCTCCACCGTTTTGTTCCTCATTGGGTTGTGTTCTAAAGTT
GAACTACAATGCAATCCTGAAAGGGTTAGTATCaacaaatcttttgaaat
ctCCACAGTATTGTTCCTCATTGGGTTGCGTTCTAAAATCGAACAACAAT
GTATTCCTGAAAGGGTTAGTATTTAAGAGACAACTATTAGATACACACTT
TTGTACACAAGGTTACGTTTCAAGAgactgaaatgattttttttcattgt
ctttttttcaatttgaggTTAGGCTAGGTCTTccttaaatttttacattt
ttttaatggAAGGAGCCCATATTTAACATGGCTAATGAAAATCAATCcac
aaattaaaatcaaaaatcaattatATATTTCCAAatgtatacacgctttt
tcttttttaagaaacataCTTTTAagagaatgcctaaaaactaacatttt
ttaattcgtttttttcaaagaaccttccaatcaaggcaaagttccagaaa
aatacttacatgacagttagaaacacttcagaaagtcagaaaatcaatat
agaagataggaaagtactgTAGATTAGTCtattagactattgtattatcg
acatgcgttctttaagcttgacaaagtttagaaacatgtaagaaacattt
aaggctcaaaaggccaatttcttaagaaacattgaggctgctttggtaaa
actagtttcttaaaaaaaacaaacgtgtatgACAAAAGTTTATGATGATA
TACAAGTTATATAAAACGTCTCgtgaattttacaaaaaagatcTAAATTA
GGGAGGGTTGTCCAAAAATGTACATTGCTACAGCCATCGCAATCGGTGTC
GGAAAGTGTGAAAAATAATTACGTTTATACTTAGTAGTTACAATCATTCA
TAATTTCAGGGCTTGGATTACATAAATCATTATAAAATTTCTTATCTAAA
AAGGGCGAAGGCTCACTGATGTATTGTCATTTGAATTGAATCTACACACA
TAGAAGGCTTGCAAAATTATTAGCGCAAACGATCTAAACCATACATTTCC
CAATAAACTTGTTCCACGAGACACGTATAAGTCCTTCTACCAACGCCCTC
TATGTTTGAGCTGTGAAGTCTTTTTAAAGATACTTAAAGAGTTTGTTCTT
ACATGAACTGCTTTACTCTATGCGTCTTCTGTCTTCGATCTCACTAACGG
GATGGTTTCATATTTGTCTCGCTTCTTGAAGTAGATGACCAATCCAATTA
TCACACCTAGAATCAATATAATCACCACTACAATCAAAATGATATATCCA
ACTGCAAGCCCTGATGATTCTTCTCCATCAGAAAGCTGGCAATGTGCACC
AGAATAGCCAGCTTTGCACTGGCATGTGTAGTCGTTTGACTGATTCCTAT
TTCTCTGGCAAATCCCGTCATGTTGGCAAGAGTTGATGTAGCATGGAACT
TCGTTCTGACATAACTCTCCGAAATACCCCACTGAGCATTCACATTTGAA
GGTATCTAAGGTTTTCAGGCAGGTTGAGTTGTGTTGACATGGTCGATGAA
AGCATGCGTTTTCCAATTGGCAGAATTGTCCGTAATATTTGTCGCTACAC
GAGCAATTGTAATTGATTTTATCAACGGGAATGCAAGTTGCGTTGTTTTG
ACAGCTATTTATATCGCAAGATGAACAACTGAGTTTGTCGTCGGCGTAAA
ATTCATTGATGGGAATACTGACGTTACAGTTCCCTTTGACATGTCCAGCA
ATGACCAAGGTATTCAAAGGGTTTATAGCATCATACAACCCACAATCACA
TACAAGCTTATTGTCCTGGAGATACAAATATTTTAAACTGGACAGTGGTT
GAAATACGTTCGGCTCAATACTTGCTAGACCATTACTACTTAAAATAATA
AATGTTATCTTATCCAAACCTTCGAATACACCATTCTCCAGACGTTCTAT
TTTATTATCCATCACATTTAGAGTATCCAAGTatggaatattttgaaaag
cGCCCGATCCAATTTCCTTAATGTTGTTACCACTGATATCTAGATCTGTA
ATTGAATAGTACCCTTCAAAGTCCGGTCGGCTGATTGTttccatcttgtt
ttgtttgagTCGCAACTCTTTTAGAGTGGGTATGAAACGTGAGATATTTG
CAGGAACCCTTgacaacgaattttcactgaggTCAATTTTTCGGAGTTTC
TTGAAACGAACGAACTGTTCCGGTTTGAAAAGGCTTatatcatttttttc
taaatgcaAAAATTGAATTCCGGGGTCAAGCTTGCTNTGACCAATCCAAT
TATCACACCTAGAATCAATATAATCACCACTACAATCAAAATGATATATC
CAACTGCAAGCCCTGATGATTCTTCTCCATCAGAAAGCTGGCAATGTGCA
CCAGAATAGCCAGCTTTGCACTGGCATGTGTAGTCGTTTGACTGATTCCT
ATTTCTCTGGCAAATCCCGTCATGTTGGCAAAAGTTGATGTAGCATGGAA
CTTCGTTCTGACATAACTCTCCGAAATACCCCACTGAGCATTCACATTTG
AAGGTATCTAAGGTTTTCAGGCAGGTTGAGTTGTGTTGACATGGTCGATG
AAAGCATGCGTTCTCCAATTGGCAGAATTGTCCGTAATATTTGTCGCTAC
ACGAGCAATTGTAATTGATTTTATCAACGGGAATGCAAGTTGCGTTGTTT
TGGCAGCTATTTATATCGCAAGATGAACAACTGAGTTTGTCGTCGGCGTA
AAATTCATTGATGGGAATACTGACGTTACAGTTCCCTTTGACATGTCCAG
CAATGACCAAGGTATTTAAAGGGTTTATAGCATCATACAACCCACAATCA
CATACAAGCTTATTGTCCTGGAGATACAAATATTTTAAACTGGACAGTGG
TTGAAATACGTTCGGCTCAATACTTGCTAGACCATTACTACTTAAAATAA
TAAATGTTATCTTATCCAAACCTTCGAATACACCATTCTCCAGACGTTCT
ATTTTATTATCCATCACATTTAGAGTATCCAAGTatggaatattttgaaa
agcGCCCGATCCAATTTCCTTAATGTTGTTACCACTGATATCTAGATCTG
TAATTGAATAGTACCCTTCAAAGTCCGGTCGGCTGATTGTttccatcttg
ttttgtttgagTCGCAACTCTTTTAGAGTGGGTATGAAACGTGAGATATT
TGCAGGAACCCTTaacaacgaattttcactgaggTCAATTTTTCGGAGTT
TCTTGAAACGAACGAACTGTTCCGGTTTGAAAAGGGTTatatcatttttt
tctaaatgcaAAAATTGAATTCCGGGGTCAAGCTTGCTAGCAATTTCTGC
AAGTTTTTGATCAGTTAAACCTTGGTTGACACAGTATGCGGTGGACGAAT
CGTCGCAGTTGCATTGCTTCGGACATCCACTTGATATTGTGATCATTGTT
AGGAAGACCAGGAAAGTTATGTTTACCAACCTGCCCTGCATCGTGTGTAG
TTAGTTACTTACTATCTAAAAAGGAAAGGAAATGAAAGTCAGACTATATT
TCCCTGTTTTCCACGAACTACATACTACTACTAGTCTATACATAATGCaa
aaaaggcaatttttatattgggctcttctagaaaaaaattgaatatgggg
gtggatgatataacattttttggaagttAATTCACGGGCAACGGAACTCA
CCCCGGACGTTCAAAATCACCCCTTATCAGAGCAAGTTTGCCCCTAAAAC
AAGACAAATTTTGCAGacttttcactacccccggacaaaatatccaatat
atcatCCACCCCCATGAACAAAAATTTCTGGAAGGGCACATTGCTGCTAT
CAGATTCACGTGACCTTTCTGACAATCGTCACAAGAGCTAAAAAGTTTCG
GATAACTGCTCCCCCGAAAATCTCGAAAATCTCAATATATAAGTTAAGAA
TATATTTAAGTTCAATCGTGATCCGCATCAAACATTATCAAGGTTCGAGT
CGATCTAAAAGTCTGTCGTTTTGTTTTACCTCGCTCATATGTTGGACCAA
GTTGATTCAAATTCATCCAGGAATGATGATCAACACAGTTGTCGTGGCCA
GAGTGACAACATTGTGGTTACatccttttttttataagaaccagaacGTT
TTGCCAATGTTTAGCAGTGCTTGTTTTGTGGCACTTCAAACTTTTTATCA
TTCTTCTTTATATTCTACTCTTATGACCTTATGAGGTGTTTTAAGCTTTA
TATTCAATCTTTAAtactttgaatttcaaattgCTTAAAATAGAGCAATT
TCAGACTCAACACTTTTCTTCAATTGTTCTTATCTTTCGGCAATCTTGAG
cctaattgttcttataaaaaaaactttacccCAAAATGATAACATTGTGA
TAATCATCTCCACAAATCTAAACAATCACTGTTTTGTTTACCTAGCCCTT
AAATATGTTTATCTAAGACCAAGAAATCCTTCAACAAGAAGATAAACAGA
CGGCTGAAAAGCATGTCTCGACTATTCAAAATGTTTGGAATGTTAAGTTA
GACCTAAAACTTCATTCTAATCCAGCCCTTTTTATGTGTTCCATGTACCT
TTCTCATATACCATGACCACCCCTAACATTGCACCATAGTTTATGCTCAT
TGGGCCAAGGGCTTTCGTTTAACTTTTAGACATGTTtcttttagctgttt
ttaggGTTCGAGCTATATCAGCCTGGTTTCCTCTAAGATAAAAATTTACG
TAAAattactaccttaagggaactaatttttgcgggaactaaattttgcg
gtttttgcaGATTTAGGCCCAAACCGTAAAATTCAGTTCCcgcaaaatct
ttcaaatgcgaaaaacaaaggccgaataattcacagtacggctctaattt
tctttcaagtgagaaatccgcaaaattaagttcccgcaaatattaaatat
taaatcttgaactgcgaaccgcaaaaattagttcccgcaaaaaatagttc
ccttaaggtagtttgAATATAAAAGACAAATACAGGATGGCAATCTGCGG
TGAAATATGTACGTagaattaatgaaatttaaagtgaCTTTCTTCCATCT
TCCAGGCTAAGATGTGCAAATCGATCATCAACACTCTCACATTCGTGAAC
GATGCTATCAAAGAGTGTATGGGCAGACATATGGATCGCACCAAGGTTTG
TACATCTTAATATTTTCATACATTCTACTCTTTGACTCTGGGGGACTCGT
TATCCTAAGTCTGAAACATGTCTCATACAGTGTCCGGAAAAAACCTTAAC
AGAATTAATGTCTTGATAAAATCCCCATtgtatcaatttttatgacttaa
ttactaaatttctttttgatagCCCGTTTTAATTACCTTGGGAATTGAAC
ATCTATcaatttaacaaagaatttcaaCATTATTTCAAGGAATACAAAAA
TCGTTAACAAGCAAGAGagttccaaaattacgaaaataatATTCAACTCC
CTcgaagggtcataaattcttgaaatttggactaaatttgaaaattctgg
ctgaaattttgtggAAATTGTCTCCTtaagggtggcaaaaacgtcaaaaa
atggacaaaatttttAATCCTTTAACGACTGCGTCTTTTTATTTGTCCGT
GCCTAAAATACCGTGTAAAATACCGGGGCTTTTTTTACGTGCCGTGCCAA
AAATACTGATGACGAGATCCTTTTAATTTTGATGTTGGGCCATTTgatgt
cagcattgtattggcTAAACTTGGTGACATTTTGGTGATTGAATACTCCA
GGATTACTATAAAACTCAGTGCATTTGGTATAGATGTGTAggatttaaag
tctattcacgataagtgtgcactcttttttcttttacctataacttttga
aggaattcttcaatctttataaatttggtgtcattggaaagatattagtg
agtggaacaatttgaaataaaaaaatcttcaaaataattctgaaaatgaa
gaagaaaaaaatgaagatcttgtagaaaagtgctataactatcattttca
ctgttcttcattttcatcttcatttttagaatttttttgaagattttttt
atttcaaattgttccactcacaaatatctctccttACTTTAGTTACAATG
AGAAATTAAATAGTTTTCCTCATATCTATTTTATTTTCCACAGCTGAAGA
ATCAAGTGATTCGGTTGAGCAACAAATTCGAATTGATGAAGTCACGTTCA
GAATCACAAACCCAGGTAGgtagaaaataataattttttttattttacca
gGGTTCACATTTCTATACTATACTAGGAATAGAAATTTTAGgtttaaatt
tttgtcaaagaaaaataagaacacatGTCGCACTTTTCGGCGGactaaaa
aaatcttgaaaacatATTATGTTGTAGagcaattacacgcttttttttgt
aagaatagtgtactttggataaGGGTCAAGCATTCTTAAGAAAtggccaa
aattgagggtgaaatattcttaacgtattcttactttttagacttgactt
ttttacaaacatgagaaattatcaatttgagagttttagccttttgagtg
aacatttgggttaaaattacatttcttcctcaaagcttcaatttttctct
aacaaaggaagcagttttttctgttaaccaaatacaaaatgactgtattc
ttatcaaattctgtgaaattgaCCCTAGAGGGCTAGAGGGTATTCTAACG
ATTTGGCCTATTTTCACCctcctgatattcttataaaaaaagcgtgtaat
cgtaaaatcttttttgtttttttcagagTTATTTGAGTTCATATTTCGAT
TGTGAAGTTGACAAAATGGATGAAGAAGAGGCAGAAGAATAAACAGGACA
TGCGCATTGTGTCCTTCGTGGTTGGCGATTTCAAATGGGTTCGAACTGAA
ATTTACCTCCTGGACATTTTACCCCTTAGGTTACgacattgaaattgaaa
ttcaccccatggacattTCAGAATTTTCTCGATACCTGTTGACAATGCAT
ATTCCATCTGATATGATAAGTTATGAAGGTTGTTTCCGGATTTTATATTC
CCTCACCTTCGAAAAGGATTCACTGATAATAATTGAGGAATCAATGCAAT
TTTCCAACATATTGCCTTAAACGGCCTATTGCGAAGTGAAACGAAACTGT
CTACCAAACCCCGACATATCTTCAAGGGAAGTCATCAAAGCGATGTAATT
CATATCCTCGTATCTTCGGAACATTGAAGTCGTCTGAGAATCTACATAAT
GAGCTGACTCGGCTTCCACATTATCACGTGTTGTTGTGATCAAacctttg
aatagatttatctACAAACTAAATTCTCCACCTGAGTATTGTCTTTTGAA
CTATAACATGtccccatttttcttttgataacatttgtgcttctcGCTTC
tcatttcacttttattgatagaaagaaaaatggggtggagacacgagaaa
gcgtttcaggttagtgggatggagcatgttgcattgcaccaacgcgaaaa
aaacttctcgtgtccccgaGCCTTAAGCTGCGAATTCTAGATATTTGCTC
CGCCTTGATACAATTGTTCCATGTTTAGCGGACACAACGCTGTATTGTTG
TAACAGTTTATAAACAATGGAAAAATtctcaacattttcattttatttta
taaatatatttttaaaaagattttataaaaaGAGAACTATTTATTTACAG
TAATTATAAAAAGATATCACAAAGAatacataaaaaaatattttgataca
ttACAAAACTACAGGTTGGGCAAAAAGAATATGGTCAGAAATTGTGCTAC
TTGCAGAGGAATTAGTGCCATAGAAACATTTCTCTTTTGTTAGTTGCGCT
GGAAACTTCGTCCTAAATTTTTACTTATNATAGAAACATTTCTCTTTTGT
TAGTTGCGCTGGAAACCTCGTCCTAAATTTTTACTCATGTCAGATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006168XLOC_006168Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011004-exon-sc0000119-1491911889:369225..369574TCONS_00011004-exon-sc0000119-1491911889:369225..369574Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1510915933:369225..369574TCONS_00011004-exon-sc0000119-1510915933:369225..369574Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1575043694:369225..369574TCONS_00011004-exon-sc0000119-1575043694:369225..369574Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1491911889:370566..370699TCONS_00011004-exon-sc0000119-1491911889:370566..370699Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1510915933:370566..370699TCONS_00011004-exon-sc0000119-1510915933:370566..370699Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1575043694:370566..370699TCONS_00011004-exon-sc0000119-1575043694:370566..370699Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1491911889:370997..371209TCONS_00011004-exon-sc0000119-1491911889:370997..371209Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1510915933:370997..371209TCONS_00011004-exon-sc0000119-1510915933:370997..371209Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1575043694:370997..371209TCONS_00011004-exon-sc0000119-1575043694:370997..371209Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1491911889:372221..372354TCONS_00011004-exon-sc0000119-1491911889:372221..372354Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1510915933:372221..372354TCONS_00011004-exon-sc0000119-1510915933:372221..372354Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1575043694:372221..372354TCONS_00011004-exon-sc0000119-1575043694:372221..372354Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1491911889:372781..373194TCONS_00011004-exon-sc0000119-1491911889:372781..373194Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1510915933:372781..373194TCONS_00011004-exon-sc0000119-1510915933:372781..373194Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1575043694:372781..373194TCONS_00011004-exon-sc0000119-1575043694:372781..373194Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1491911889:375353..375608TCONS_00011004-exon-sc0000119-1491911889:375353..375608Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1510915933:375353..375608TCONS_00011004-exon-sc0000119-1510915933:375353..375608Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1575043694:375353..375608TCONS_00011004-exon-sc0000119-1575043694:375353..375608Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1491911889:375946..376098TCONS_00011004-exon-sc0000119-1491911889:375946..376098Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1510915933:375946..376098TCONS_00011004-exon-sc0000119-1510915933:375946..376098Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1575043694:375946..376098TCONS_00011004-exon-sc0000119-1575043694:375946..376098Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1491911889:381130..381219TCONS_00011004-exon-sc0000119-1491911889:381130..381219Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1510915933:381130..381219TCONS_00011004-exon-sc0000119-1510915933:381130..381219Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1575043694:381130..381219TCONS_00011004-exon-sc0000119-1575043694:381130..381219Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1491911889:382218..382289TCONS_00011004-exon-sc0000119-1491911889:382218..382289Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1510915933:382218..382289TCONS_00011004-exon-sc0000119-1510915933:382218..382289Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1575043694:382218..382289TCONS_00011004-exon-sc0000119-1575043694:382218..382289Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1491911889:382851..384021TCONS_00011004-exon-sc0000119-1491911889:382851..384021Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1510915933:382851..384021TCONS_00011004-exon-sc0000119-1510915933:382851..384021Clytia hemisphaericaexon
TCONS_00011004-exon-sc0000119-1575043694:382851..384021TCONS_00011004-exon-sc0000119-1575043694:382851..384021Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:369225..384021 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.805943	9.55532e-08	0.0187549	0.000432078	2.26934e-10	0	0	0	0	0	0.0127661	0	5.83917e-10	0	0	0	0	1.62993e-06	0.2034	0.183745	7.66685e-08	0	3.90245e-10	0.108097	0	0	0.01474	0	9.51814e-06	0.47794
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011004 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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