TCONS_00011001 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011001
Unique NameTCONS_00011001
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3007

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011001 ID=TCONS_00011001|Name=TCONS_00011001|organism=Clytia hemisphaerica|type=transcript|length=3007bp
tttttctttatttcgtcttttaataaaagtaaaaaaagacaaaatctcAT
AATGGCCACTTTATCAGATGAAGAGTTGAATTCCGCATCCAGTGAAAGTG
AGGATGATCTTCCAACACTATCAACAATAATGACGAAATCCCCTTCACGA
AAACAACCTGCTATCAAAACTGCTGATGAAGTTCTCACTCCAAGACGTAC
AAAGAAACATACTGACAATGATGAGCTGGTGTTGGGATCTCCTTTGCGTT
CACCAACAACTAGTAGGGTAAGAAACACGAAATCGAAAGCTAGATCTCTC
AATGATTTGCTGAAAGACAAAGCCAAGGATGATGACATTCAAAGTAAAGT
TGATGatataatgaaaatgaaagAAATGGAGTTGGATGACTATGGTGAGA
ACAGTGAAGAAAAATGTGATAGAAATGCAATAGGCGAGCTATACGGTGAT
TATTCACAAGAATTCTCACAAGATGTTGATGTGCTAGATGATTCTAATGA
CTCCATTGAAGTGAAATTCAGTTATGCATTATCAAGAGATTTCCCAGACA
CCTTCCCTGGAATAGAATTGTTTGTGCGTCCTGCAGACGATGTTGATCCA
GTGATGCTCTTGGAAGGACTGTTGGAATATTTCGAAGATGAATCAATTGG
GATATCCAAAGCTGATCTCGTCGACGAAGATTTATCAAGGGAAAATGTTC
ATGAAATCATTGGGCAAATAGTAGGGGACTTATCTTGTCAAACAGAAATG
AAGGAGCGTGATTTATGGTGCAAGATATGGAAAATTTTGTGCTTTGTTGA
AGATTGTGAAGTTTGTTATGCTGCTTATGAATGTCTTTCTTCTCATTTCA
AGATGTGTTCCaaaaacagCATAAGTCCACCATGGATCCCATCAGTCATC
GAGTTACTGGAGAGTATCATTGGAATCGGTGCTTCACCCTCGATTGTCTC
CACCATCGAGTATGTTTACCCTGAGCTCGACACCAGTATATTCGAATCAC
TCGATTGTTCGGGTGAAGAGCAGTTCGTCAACGCTCGAGCTATACGTAAA
GATATTCATCGCAGGCTCTACACTGTACAATTTATCACGAAACTTTTCAC
AGTCGCCGTACAGACGTTCCCAGGACAATACAATGTTGATGAACTTAGAG
CTATTTTCATGTTGGTTTCTCATTTATCTGTTGATAAGCTTTTTCAATCG
GTTTTGATTGATTTCAAAGTGTTATTGGCGTCTATCTTGGATACCTACAA
TGATGAGGCTATGTGGGAGACGGAGGTTGAAAACTTGGTCAGAGATTTCC
TCTCGCTAGATTGGCATCATCGTAATTTATTACAAGGTGTCGAATCTGTC
TTGACATCAACAAAAAGAGGATTTCATTTTCAACAAGTTCTCGCTATCAA
TGTTGCcatcaaaataatcaaagatcGCGAAAaaaagaaccaatcagaag
gcGGCGAGAGTGAGACGGATGACATGGATGAAGAGAAAGGTCGAAAAATC
TTCTCAAACTACCCTGTCAAATTGAAGTTGGTGCATCAAGTTTTGAATCA
CATCAAAAGTAACCTCAAGGATATTGACGAAGACAACGATGACACAGATT
ACCACGAAATCTCCACCGTTTTGTTCCTCATTGGGTTGTGTTCTAAAGTT
GAACTACAATGCAATCCTGAAAGGGCTAAGATGTGCAAATCGATCATCAA
CACTCTCACATTCGTGAACGATGCTATCAAAGAGTGTATGGGCAGACATA
TGGATCGCACCAAGCTGAAGAATCAAGTGATTCGGTTGAGCAACAAATTC
GAATTGATGAAGTCACGTTCAGAATCACAAACCCAGagTTATTTGAGTTC
ATATTTCGATTGTGAAGTTGACAAAATGGATGAAGAAGAGGCAGAAGAAT
AAACAGGACATGCGCATTGTGTCCTTCGTGGTTGGCGATTTCAAATGGGT
TCGAACTGAAATTTACCTCCTGGACATTTTACCCCTTAGGTTACgacatt
gaaattgaaattcaccccatggacattTCAGAATTTTCTCGATACCTGTT
GACAATGCATATTCCATCTGATATGATAAGTTATGAAGGTTGTTTCCGGA
TTTTATATTCCCTCACCTTCGAAAAGGATTCACTGATAATAATTGAGGAA
TCAATGCAATTTTCCAACATATTGCCTTAAACGGCCTATTGCGAAGTGAA
ACGAAACTGTCTACCAAACCCCGACATATCTTCAAGGGAAGTCATCAAAG
CGATGTAATTCATATCCTCGTATCTTCGGAACATTGAAGTCGTCTGAGAA
TCTACATAATGAGCTGACTCGGCTTCCACATTATCACGTGTTGTTGTGAT
CAAacctttgaatagatttatctACAAACTAAATTCTCCACCTGAGTATT
GTCTTTTGAACTATAACATGtccccatttttcttttgataacatttgtgc
ttctcGCTTCtcatttcacttttattgatagaaagaaaaatggggtggag
acacgagaaagcgtttcaggttagtgggatggagcatgttgcattgcacc
aacgcgaaaaaaacttctcgtgtccccgaGCCTTAAGCTGCGAATTCTAG
ATATTTGCTCCGCCTTGATACAATTGTTCCATGTTTAGCGGACACAACGC
TGTATTGTTGTAACAGTTTATAAACAATGGAAAAATtctcaacattttca
ttttattttataaatatatttttaaaaagattttataaaaaGAGAACTAT
TTATTTACAGTAATTATAAAAAGATATCACAAAGAatacataaaaaaata
ttttgatacattACAAAACTACAGGTTGGGCAAAAAGAATATGGTCAGAA
ATTGTGCTACTTGCAGAGGAATTAGTGCCATAGAAACATTTCTCTTTTGT
TAGTTGCGCTGGAAACTTCGTCCTAAATTTTTACTTATNATAGAAACATT
TCTCTTTTGTTAGTTGCGCTGGAAACCTCGTCCTAAATTTTTACTCATGT
CAGATAC
Run BLAST on NCBI

transcript from alignment at sc0000119:369202..384021+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011001 ID=TCONS_00011001|Name=TCONS_00011001|organism=Clytia hemisphaerica|type=transcript|length=14820bp|location=Sequence derived from alignment at sc0000119:369202..384021+ (Clytia hemisphaerica)
tttttctttatttcgtcttttaataaaagtaaaaaaagacaaaatctcAT
AATGGCCACTTTATCAGATGAAGAGTTGAATTCCGCATCCAGTGAAAGTG
AGGATGATCTTCCAACACTATCAACAATAATGACGAAATCCCCTTCACGA
AAACAACCTGCTATCAAAACTGCTGATGAAGTTCTCACTCCAAGACGTAC
AAAGAAACATACTGACAATGATGAGCTGGTGTTGGGATCTCCTTTGCGTT
CACCAACAACTAGTAGGGTAAGAAACACGAAATCGAAAGCTAGATCTCTC
AATGATTTGCTGAAAGACAAAGCCAAGGATGATGACATTCAAAGTAAAGT
TGATGatataatgaaaatgaaaggtaaatggatttttaatttttgataaa
atcattttaTTTACATTGTTTGGGGGGTTTGTCTTGAGGTTCCCTTCGAC
TTAGACTACgccatatcttccttcgtttcgagcgtgaAAGTCCTACTCTt
cggatatgagcactgcttttgttttgaatattgaaattctccggataaat
cgcatgcacactgaggttttaatgaaacaattgAGAGTTTCGAAatttaa
gccaatcagctgtgttttaaacattcttttatttgaaatatctATTGATA
AGCATCTTTTGGGAAAGTTGtcttatgtttaaacctattaataagaaatt
cccggtgggggctaCTAGTGGCTGCCTATaacagtgcctatagaccaaga
gtaaggcctgtGTAGACTACCTTGGACAGTGTAAAGAGGTTTAAAATTAG
AGTCAAAATAACAGGCATAAGGCGGgtaattacaaaatttctttactcaT
TTTTCTTTGCTCTGATATTGATATCACACAAAATGTTCCGATAGGTTGTT
ATTTCAGTCTGTCAAAGTTTAAGGTTCGTAAGAATTGCGCCATTTATCAA
AGTTTTGGTGCATTACACCTATCATctttgtaagattttttttaaagaag
caaTTTAATTGGGTACAACGAGtacctttaaaggttttgttttaaataag
aaagatatcgtttgcttactcatcaattttgatttacaagccttttgata
ttgaattgacacgaatgtggagcaagattgttaagaaagaggaaaagaaa
aacattttttgcttagatcagcacaatataacaatgggcagacactgtcc
tgatataaaaaacatgtgtctgatatgaaaagggatatttatgtaaaaat
aaaacctttaaatggaATTCCTTATTGGTTGAATTTGACATAAATAAGAT
TTTACAATTTCTTCTATCTTCGCTTTATTTACAACTTTCTCTGTGTTTAT
TGTCTTTGCTTTAGAAATGGAGTTGGATGACTATGGTGAGAACAGTGAAG
AAAAATGTGATAGAAATGCAATAGGCGAGCTATACGGTGATTATTCACAA
GAATTCTCACAAGATGTTGATGTGCTAGATGATTCTAATGACTCCATTGT
ATGTAAAATGCTTATACTCGTCTTGTCATTCTGAATCTTTTAAATCCTTC
CATGTATAGGGTTCTATGTATAGGGTGTTTCATATTTACCTTTCAAATTA
CTTCTTTGTGgggttttctttattttaaaattgtatgCTACCAATATTTA
CTACACAGGAAAAGTGAGTATATCCAAGTGTGAAAAGTGCATTCCACACC
TTGGAACATGAATAATCTTCCCGTCTGGGTGGATTTTTCAACCTTCAAAG
GTGTGAAATtcacttttatttactttttcctGTGTTATTTACTAGGAAGT
GAAATTCAGTTATGCATTATCAAGAGATTTCCCAGACACCTTCCCTGGAA
TAGAATTGTTTGTGCGTCCTGCAGACGATGTTGATCCAGTGATGCTCTTG
GAAGGACTGTTGGAATATTTCGAAGATGAATCAATTGGGATATCCAAAGC
TGATCTCGTCGACGAAGATTTATCAAGGGAAAATGTTCATGAAATCATTG
GGCAAATAGTAGGGGGTAAATATGTAATCGCTCTTATCTTTAAATATTCA
TCATTTAGAGTCACACATATATCTATCAAATACAAGAGATGTTAAATTCT
GAAAACACTATATTTGCTTTTCGTGGCTCATTTTTTATCAGTTGACATGA
AGGTACTTTCTCCACAAAATCAAAAGTGATGTCTCAAAAAAGTAGTAAAT
TGTAGAGTTGCATTAagttgcaataaaaaaataaaaaaatatcaaaatat
aataacTGCTCcttttttcaccgttcaacacattaaagggacataacagt
acttgtatgcagcggatacaaaatcaaaacaaatgtcacatgtcaaaaat
cgaactaattatggctaattttgattgttcaattgttttacaagtttgtt
ttggactagccagtaccttcccacaaaccaaattttttctttgttttatg
gtttgttttattcaagctccaaataaaaagaatcgatgaggtgaggttgc
gtgtcttttctgaatttcaacgactagaagcttcttccctcaaaaaacgt
tgtttaattttacaaccttttttaggtttttgagaatccatccaactttt
ttgactaaatgatatttcatagtaacattaaacatgAGAACATATAAATT
Aatgagcatttccaaaaatgcaataaacagaaagaaaaataaatacaatc
ccgcacgggtcagacatacagaaatctgtatgtctctccttgcgatttta
ggtgaagaaaaaagggcgttggaagaagcttctagtcggttattttcctt
ttctctcacgcgcgctgaatacttaattagtgtttacattatttgattga
cagttttattataagtaataagcgactagtttactagtctactttaatgt
ccctttaagttgCAATAGATTGCATTCCTTAAAGGTTCAGCAAAAGGttg
actttgttttttttatgaagcAGAAGAATACCCTAAGACTTTTATAACAA
AATGTTGTTATCTTCTTAGACTTATCTTGTCAAACAGAAATGAAGGAGCG
TGATTTATGGTGCAAGATATGGAAAATTTTGTGCTTTGTTGAAGATTGTG
AAGTTTGTTATGCTGCTTATGAATGTCTTTCTTCTCATTTCAAGATGTGT
TCCGTAAGTTACCATAATAGTGATAAAAGTTCTGTAGGTTATTTTGTCTC
GAACTCAAATTCACCAAAACATCAAGAATATGTGCATAATTTgcttttta
aattcaattctCCATATCAGACGAAAAACCTGCTTTGACAACTGGCATAA
TAAAGGACTTTTTACAATGTGTTTTGAACCCAAGCATTACATATCAGGGT
CTTAAAATTTCCTAAGCTTCTTCCATCGAAGGTGCTCGAAATCAACCAAA
CCCCTACCAGTTGTATCTTGAAGATTACATGCTTTTCTTAATCAAGTGAT
AAGGCTAACACGTGCTTAAGATTTTATTGTTCTTAAAAAGTGGAGCTTTT
GTATTCGGATTCAATTTTTTATCCTAGGTGTGTTTGTATTCGTCAGTTAT
TCTTCAAAAAAGCTTTGtacatttttcagaaaaacagCATAAGTCCACCA
TGGATCCCATCAGTCATCGAGTTACTGGAGAGTATCATTGGAATCGGTGC
TTCACCCTCGATTGTCTCCACCATCGAGTATGTTTACCCTGAGCTCGACA
CCAGTATATTCGAATCACTCGATTGTTCGGGTGAAGAGCAGTTCGTCAAC
GCTCGAGCTATACGTAAAGATATTCATCGCAGGCTCTACACTGTACAATT
TATCACGAAACTTTTCACAGTCGCCGTACAGACGTTCCCAGGACAATACA
ATGTTGATGAACTTAGAGCTATTTTCATGTTGGTTTCTCATTTATCTGTT
GATAAGCTTTTTCAATCGGTTTTGATTGATTTCAAAGTGTTATTGGCGTC
TATCTTGGATACCTACAATGATGAGGCTATGTGGGAGACGGAGGTAGGTT
CCTTGAGGCTTAAGCTCCCTATATTTATCTCAGTTTCACTTCTCGTAGAC
ATTAATATATCAACACTGTTACTGAGAGGAAATTAGGTCCTGGTCTATGC
TGGTCAGCTGTATTGTCGAGAAGGGAATTAATTAAATAAGTTGACTGGTA
CAAAAGCTAAAGTAAAACTTGTTTAACTTGAATGCCTGAACAAGAATACT
GGAATGTTTAATCAGTATAAATTTATAGATCTAAGAAAGGGGACGCGGGG
GTTGCGAGCACCGAACAATCAAAGCATTTTTCTTTCATCGCTGAAGCCGA
CagcaaaaattgttaaaatcaaATCTAATCCGATCCGTCATTTTATTCTT
CAAATATCGAAAAAAATACCGACAGAAAATAGGGCTAATTTCTCAGCGTC
CTTGTGCGTCCGTCTTACGTTTTAATAATCTTTATTCTATGTAGGTTGAA
AACTTGGTCAGAGATTTCCTCTCGCTAGATTGGCATCATCGTAATTTATT
ACAAGGTGTCGAATCTGTCTTGACATCAACAAAAAGAGGATTTCATTTTC
AACAAGTTCTCGCTATCAATGTTGCcatcaaaataatcaaagatcGCGAA
AaaaagaaccaatcagaaggcGGCGAGAGTGAGACGGATGACATGGATGA
AGAGAAAGGTCGAAAAATCTTCTCAAACTACCCTGTCAAAGTAAGttgaa
agagaaattttttgTCAGTGCACATCGGTGTTAACTCCTAGTCCTTCTCA
AAAACTGATGAAAGTCTGAGATTCTTTTTCGTAAATTATTGCTGGTCTAA
TTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCCCTCAATTGTCTCCACCATCGAGTATGTTTACCCTGAGCTC
GACACCAGTATATTCGAATCACTCGATTGTTCGGGTGAAGAGCAGTTCGT
CAACGCTCGAGCTATACGTAAAGATATTCATCGCAGGCTCTACACTGTAC
AATTTATCACGAAACTTTTCACAGTCGCCGTACAGACGTTCCCAGGACAA
TACAATGTTGATGAACTTAGAGCTATTTTCATGTTGGTTTCTCATTTATC
TGTTGATAAGCTTTTTCAATCGGTTTTGTTCGATTTCAAAGTGTTATTGG
CGTCTATCTTGGATACCTACAATGATGAGGCTATGTGGGAGACGGAGGTA
GGTTCCTTGAGGCTTAAGCTCCCTATATTTATCTCAGTTTCACTTCTCGT
AGACATTAATATATCAACACTGTTACTGAGAGGAAATTAGGTCCTGGTCT
ATGCTGGTAAGCTGTATTGTCGAGAAGGGAATTAATTAAATAAGTTGACT
GGTACAAAAGCTAAAGCAAAAAACTTGTTTAACTTGAATGCCTGAACAAG
AATACTGGAATGTTTAATCAGTATAAATTTATAGATCTAAGAAAGGGGAT
GCGGGGGTTGCGAGCACCGAACAATCAAAGCATTTTTCTTTCATCGCTGA
AGCCGACagcaaaaattgttaaaatcaaATCTAATCCAATCCGTCATTTT
ATTCTTCAAATATCGAAAAAAATACCGACAGAAAATAGGGCTAATTTCTC
AGCGTCACTTGTACGTCCGTCTTACGTTTTAATAATCTTTATTCTATGTA
GGTTGAAAACTTGGTCAGAGATTTCCTCTCGCTAGATTGGCATCATCGTA
ATTTATTACAAGGTGTCGAATCTGTCTTAACATCAACAAAAAGAGGATTT
CATTCAGTTTCATTTTCAACAAGTTCTCGCTATCAATGTTGCcatcaaaa
taatcaaagatcGCGAAAaaaagaaccaatcagaaggcGGCGAGAGTGAG
ACGGATGACATGGATGAAGAGAAAGGTCGAAAAATCTTCTCAAATTACCC
TGTCAAAGTAAGttgaaagagaaattttttgTCAGTGCACATCGGTGTTA
ACTCCTAGTCCTTCTCAAAAACTGATGAAAGTCTGAGATTCTTTTTCGTA
AATTATTGCTGGTCTACTAATTTATAAAGTCtgaaaattttcgtttttcg
aAAGGAATTATCTATTCCCTATCTTGATAAAAATCAGATAAATATTAAAT
AGCGCTCCAAAGTCCGAAGTGCTGCTATGCATAAAATGTACCCGAGCTTT
TGAGGAGGATGGCTAAATCAATTTTTGAGAGCAAAATGTATCAAAGGCAA
ActctttatttattttaaatttattcaaTATTTGATGTTTTCAGTTGAAG
TTGGTGCATCAAGTTTTGAATCACATCAAAAGTAACCTCAAGGATATTGA
CGAAGACAACGATGACACAGATTACCACGAAATCTCCACCGTTTTGTTCC
TCATTGGGTTGTGTTCTAAAGTTGAACTACAATGCAATCCTGAAAGGGTT
AGTATCaacaaatcttttgaaatctCCACAGTATTGTTCCTCATTGGGTT
GCGTTCTAAAATCGAACAACAATGTATTCCTGAAAGGGTTAGTATTTAAG
AGACAACTATTAGATACACACTTTTGTACACAAGGTTACGTTTCAAGAga
ctgaaatgattttttttcattgtctttttttcaatttgaggTTAGGCTAG
GTCTTccttaaatttttacatttttttaatggAAGGAGCCCATATTTAAC
ATGGCTAATGAAAATCAATCcacaaattaaaatcaaaaatcaattatATA
TTTCCAAatgtatacacgctttttcttttttaagaaacataCTTTTAaga
gaatgcctaaaaactaacattttttaattcgtttttttcaaagaaccttc
caatcaaggcaaagttccagaaaaatacttacatgacagttagaaacact
tcagaaagtcagaaaatcaatatagaagataggaaagtactgTAGATTAG
TCtattagactattgtattatcgacatgcgttctttaagcttgacaaagt
ttagaaacatgtaagaaacatttaaggctcaaaaggccaatttcttaaga
aacattgaggctgctttggtaaaactagtttcttaaaaaaaacaaacgtg
tatgACAAAAGTTTATGATGATATACAAGTTATATAAAACGTCTCgtgaa
ttttacaaaaaagatcTAAATTAGGGAGGGTTGTCCAAAAATGTACATTG
CTACAGCCATCGCAATCGGTGTCGGAAAGTGTGAAAAATAATTACGTTTA
TACTTAGTAGTTACAATCATTCATAATTTCAGGGCTTGGATTACATAAAT
CATTATAAAATTTCTTATCTAAAAAGGGCGAAGGCTCACTGATGTATTGT
CATTTGAATTGAATCTACACACATAGAAGGCTTGCAAAATTATTAGCGCA
AACGATCTAAACCATACATTTCCCAATAAACTTGTTCCACGAGACACGTA
TAAGTCCTTCTACCAACGCCCTCTATGTTTGAGCTGTGAAGTCTTTTTAA
AGATACTTAAAGAGTTTGTTCTTACATGAACTGCTTTACTCTATGCGTCT
TCTGTCTTCGATCTCACTAACGGGATGGTTTCATATTTGTCTCGCTTCTT
GAAGTAGATGACCAATCCAATTATCACACCTAGAATCAATATAATCACCA
CTACAATCAAAATGATATATCCAACTGCAAGCCCTGATGATTCTTCTCCA
TCAGAAAGCTGGCAATGTGCACCAGAATAGCCAGCTTTGCACTGGCATGT
GTAGTCGTTTGACTGATTCCTATTTCTCTGGCAAATCCCGTCATGTTGGC
AAGAGTTGATGTAGCATGGAACTTCGTTCTGACATAACTCTCCGAAATAC
CCCACTGAGCATTCACATTTGAAGGTATCTAAGGTTTTCAGGCAGGTTGA
GTTGTGTTGACATGGTCGATGAAAGCATGCGTTTTCCAATTGGCAGAATT
GTCCGTAATATTTGTCGCTACACGAGCAATTGTAATTGATTTTATCAACG
GGAATGCAAGTTGCGTTGTTTTGACAGCTATTTATATCGCAAGATGAACA
ACTGAGTTTGTCGTCGGCGTAAAATTCATTGATGGGAATACTGACGTTAC
AGTTCCCTTTGACATGTCCAGCAATGACCAAGGTATTCAAAGGGTTTATA
GCATCATACAACCCACAATCACATACAAGCTTATTGTCCTGGAGATACAA
ATATTTTAAACTGGACAGTGGTTGAAATACGTTCGGCTCAATACTTGCTA
GACCATTACTACTTAAAATAATAAATGTTATCTTATCCAAACCTTCGAAT
ACACCATTCTCCAGACGTTCTATTTTATTATCCATCACATTTAGAGTATC
CAAGTatggaatattttgaaaagcGCCCGATCCAATTTCCTTAATGTTGT
TACCACTGATATCTAGATCTGTAATTGAATAGTACCCTTCAAAGTCCGGT
CGGCTGATTGTttccatcttgttttgtttgagTCGCAACTCTTTTAGAGT
GGGTATGAAACGTGAGATATTTGCAGGAACCCTTgacaacgaattttcac
tgaggTCAATTTTTCGGAGTTTCTTGAAACGAACGAACTGTTCCGGTTTG
AAAAGGCTTatatcatttttttctaaatgcaAAAATTGAATTCCGGGGTC
AAGCTTGCTNTGACCAATCCAATTATCACACCTAGAATCAATATAATCAC
CACTACAATCAAAATGATATATCCAACTGCAAGCCCTGATGATTCTTCTC
CATCAGAAAGCTGGCAATGTGCACCAGAATAGCCAGCTTTGCACTGGCAT
GTGTAGTCGTTTGACTGATTCCTATTTCTCTGGCAAATCCCGTCATGTTG
GCAAAAGTTGATGTAGCATGGAACTTCGTTCTGACATAACTCTCCGAAAT
ACCCCACTGAGCATTCACATTTGAAGGTATCTAAGGTTTTCAGGCAGGTT
GAGTTGTGTTGACATGGTCGATGAAAGCATGCGTTCTCCAATTGGCAGAA
TTGTCCGTAATATTTGTCGCTACACGAGCAATTGTAATTGATTTTATCAA
CGGGAATGCAAGTTGCGTTGTTTTGGCAGCTATTTATATCGCAAGATGAA
CAACTGAGTTTGTCGTCGGCGTAAAATTCATTGATGGGAATACTGACGTT
ACAGTTCCCTTTGACATGTCCAGCAATGACCAAGGTATTTAAAGGGTTTA
TAGCATCATACAACCCACAATCACATACAAGCTTATTGTCCTGGAGATAC
AAATATTTTAAACTGGACAGTGGTTGAAATACGTTCGGCTCAATACTTGC
TAGACCATTACTACTTAAAATAATAAATGTTATCTTATCCAAACCTTCGA
ATACACCATTCTCCAGACGTTCTATTTTATTATCCATCACATTTAGAGTA
TCCAAGTatggaatattttgaaaagcGCCCGATCCAATTTCCTTAATGTT
GTTACCACTGATATCTAGATCTGTAATTGAATAGTACCCTTCAAAGTCCG
GTCGGCTGATTGTttccatcttgttttgtttgagTCGCAACTCTTTTAGA
GTGGGTATGAAACGTGAGATATTTGCAGGAACCCTTaacaacgaattttc
actgaggTCAATTTTTCGGAGTTTCTTGAAACGAACGAACTGTTCCGGTT
TGAAAAGGGTTatatcatttttttctaaatgcaAAAATTGAATTCCGGGG
TCAAGCTTGCTAGCAATTTCTGCAAGTTTTTGATCAGTTAAACCTTGGTT
GACACAGTATGCGGTGGACGAATCGTCGCAGTTGCATTGCTTCGGACATC
CACTTGATATTGTGATCATTGTTAGGAAGACCAGGAAAGTTATGTTTACC
AACCTGCCCTGCATCGTGTGTAGTTAGTTACTTACTATCTAAAAAGGAAA
GGAAATGAAAGTCAGACTATATTTCCCTGTTTTCCACGAACTACATACTA
CTACTAGTCTATACATAATGCaaaaaaggcaatttttatattgggctctt
ctagaaaaaaattgaatatgggggtggatgatataacattttttggaagt
tAATTCACGGGCAACGGAACTCACCCCGGACGTTCAAAATCACCCCTTAT
CAGAGCAAGTTTGCCCCTAAAACAAGACAAATTTTGCAGacttttcacta
cccccggacaaaatatccaatatatcatCCACCCCCATGAACAAAAATTT
CTGGAAGGGCACATTGCTGCTATCAGATTCACGTGACCTTTCTGACAATC
GTCACAAGAGCTAAAAAGTTTCGGATAACTGCTCCCCCGAAAATCTCGAA
AATCTCAATATATAAGTTAAGAATATATTTAAGTTCAATCGTGATCCGCA
TCAAACATTATCAAGGTTCGAGTCGATCTAAAAGTCTGTCGTTTTGTTTT
ACCTCGCTCATATGTTGGACCAAGTTGATTCAAATTCATCCAGGAATGAT
GATCAACACAGTTGTCGTGGCCAGAGTGACAACATTGTGGTTACatcctt
ttttttataagaaccagaacGTTTTGCCAATGTTTAGCAGTGCTTGTTTT
GTGGCACTTCAAACTTTTTATCATTCTTCTTTATATTCTACTCTTATGAC
CTTATGAGGTGTTTTAAGCTTTATATTCAATCTTTAAtactttgaatttc
aaattgCTTAAAATAGAGCAATTTCAGACTCAACACTTTTCTTCAATTGT
TCTTATCTTTCGGCAATCTTGAGcctaattgttcttataaaaaaaacttt
acccCAAAATGATAACATTGTGATAATCATCTCCACAAATCTAAACAATC
ACTGTTTTGTTTACCTAGCCCTTAAATATGTTTATCTAAGACCAAGAAAT
CCTTCAACAAGAAGATAAACAGACGGCTGAAAAGCATGTCTCGACTATTC
AAAATGTTTGGAATGTTAAGTTAGACCTAAAACTTCATTCTAATCCAGCC
CTTTTTATGTGTTCCATGTACCTTTCTCATATACCATGACCACCCCTAAC
ATTGCACCATAGTTTATGCTCATTGGGCCAAGGGCTTTCGTTTAACTTTT
AGACATGTTtcttttagctgtttttaggGTTCGAGCTATATCAGCCTGGT
TTCCTCTAAGATAAAAATTTACGTAAAattactaccttaagggaactaat
ttttgcgggaactaaattttgcggtttttgcaGATTTAGGCCCAAACCGT
AAAATTCAGTTCCcgcaaaatctttcaaatgcgaaaaacaaaggccgaat
aattcacagtacggctctaattttctttcaagtgagaaatccgcaaaatt
aagttcccgcaaatattaaatattaaatcttgaactgcgaaccgcaaaaa
ttagttcccgcaaaaaatagttcccttaaggtagtttgAATATAAAAGAC
AAATACAGGATGGCAATCTGCGGTGAAATATGTACGTagaattaatgaaa
tttaaagtgaCTTTCTTCCATCTTCCAGGCTAAGATGTGCAAATCGATCA
TCAACACTCTCACATTCGTGAACGATGCTATCAAAGAGTGTATGGGCAGA
CATATGGATCGCACCAAGGTTTGTACATCTTAATATTTTCATACATTCTA
CTCTTTGACTCTGGGGGACTCGTTATCCTAAGTCTGAAACATGTCTCATA
CAGTGTCCGGAAAAAACCTTAACAGAATTAATGTCTTGATAAAATCCCCA
TtgtatcaatttttatgacttaattactaaatttctttttgatagCCCGT
TTTAATTACCTTGGGAATTGAACATCTATcaatttaacaaagaatttcaa
CATTATTTCAAGGAATACAAAAATCGTTAACAAGCAAGAGagttccaaaa
ttacgaaaataatATTCAACTCCCTcgaagggtcataaattcttgaaatt
tggactaaatttgaaaattctggctgaaattttgtggAAATTGTCTCCTt
aagggtggcaaaaacgtcaaaaaatggacaaaatttttAATCCTTTAACG
ACTGCGTCTTTTTATTTGTCCGTGCCTAAAATACCGTGTAAAATACCGGG
GCTTTTTTTACGTGCCGTGCCAAAAATACTGATGACGAGATCCTTTTAAT
TTTGATGTTGGGCCATTTgatgtcagcattgtattggcTAAACTTGGTGA
CATTTTGGTGATTGAATACTCCAGGATTACTATAAAACTCAGTGCATTTG
GTATAGATGTGTAggatttaaagtctattcacgataagtgtgcactcttt
tttcttttacctataacttttgaaggaattcttcaatctttataaatttg
gtgtcattggaaagatattagtgagtggaacaatttgaaataaaaaaatc
ttcaaaataattctgaaaatgaagaagaaaaaaatgaagatcttgtagaa
aagtgctataactatcattttcactgttcttcattttcatcttcattttt
agaatttttttgaagatttttttatttcaaattgttccactcacaaatat
ctctccttACTTTAGTTACAATGAGAAATTAAATAGTTTTCCTCATATCT
ATTTTATTTTCCACAGCTGAAGAATCAAGTGATTCGGTTGAGCAACAAAT
TCGAATTGATGAAGTCACGTTCAGAATCACAAACCCAGGTAGgtagaaaa
taataattttttttattttaccagGGTTCACATTTCTATACTATACTAGG
AATAGAAATTTTAGgtttaaatttttgtcaaagaaaaataagaacacatG
TCGCACTTTTCGGCGGactaaaaaaatcttgaaaacatATTATGTTGTAG
agcaattacacgcttttttttgtaagaatagtgtactttggataaGGGTC
AAGCATTCTTAAGAAAtggccaaaattgagggtgaaatattcttaacgta
ttcttactttttagacttgacttttttacaaacatgagaaattatcaatt
tgagagttttagccttttgagtgaacatttgggttaaaattacatttctt
cctcaaagcttcaatttttctctaacaaaggaagcagttttttctgttaa
ccaaatacaaaatgactgtattcttatcaaattctgtgaaattgaCCCTA
GAGGGCTAGAGGGTATTCTAACGATTTGGCCTATTTTCACCctcctgata
ttcttataaaaaaagcgtgtaatcgtaaaatcttttttgtttttttcaga
gTTATTTGAGTTCATATTTCGATTGTGAAGTTGACAAAATGGATGAAGAA
GAGGCAGAAGAATAAACAGGACATGCGCATTGTGTCCTTCGTGGTTGGCG
ATTTCAAATGGGTTCGAACTGAAATTTACCTCCTGGACATTTTACCCCTT
AGGTTACgacattgaaattgaaattcaccccatggacattTCAGAATTTT
CTCGATACCTGTTGACAATGCATATTCCATCTGATATGATAAGTTATGAA
GGTTGTTTCCGGATTTTATATTCCCTCACCTTCGAAAAGGATTCACTGAT
AATAATTGAGGAATCAATGCAATTTTCCAACATATTGCCTTAAACGGCCT
ATTGCGAAGTGAAACGAAACTGTCTACCAAACCCCGACATATCTTCAAGG
GAAGTCATCAAAGCGATGTAATTCATATCCTCGTATCTTCGGAACATTGA
AGTCGTCTGAGAATCTACATAATGAGCTGACTCGGCTTCCACATTATCAC
GTGTTGTTGTGATCAAacctttgaatagatttatctACAAACTAAATTCT
CCACCTGAGTATTGTCTTTTGAACTATAACATGtccccatttttcttttg
ataacatttgtgcttctcGCTTCtcatttcacttttattgatagaaagaa
aaatggggtggagacacgagaaagcgtttcaggttagtgggatggagcat
gttgcattgcaccaacgcgaaaaaaacttctcgtgtccccgaGCCTTAAG
CTGCGAATTCTAGATATTTGCTCCGCCTTGATACAATTGTTCCATGTTTA
GCGGACACAACGCTGTATTGTTGTAACAGTTTATAAACAATGGAAAAATt
ctcaacattttcattttattttataaatatatttttaaaaagattttata
aaaaGAGAACTATTTATTTACAGTAATTATAAAAAGATATCACAAAGAat
acataaaaaaatattttgatacattACAAAACTACAGGTTGGGCAAAAAG
AATATGGTCAGAAATTGTGCTACTTGCAGAGGAATTAGTGCCATAGAAAC
ATTTCTCTTTTGTTAGTTGCGCTGGAAACTTCGTCCTAAATTTTTACTTA
TNATAGAAACATTTCTCTTTTGTTAGTTGCGCTGGAAACCTCGTCCTAAA
TTTTTACTCATGTCAGATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006168XLOC_006168Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011001-exon-sc0000119-1491911889:369202..369574TCONS_00011001-exon-sc0000119-1491911889:369202..369574Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1510915933:369202..369574TCONS_00011001-exon-sc0000119-1510915933:369202..369574Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1575043694:369202..369574TCONS_00011001-exon-sc0000119-1575043694:369202..369574Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1491911889:370566..370699TCONS_00011001-exon-sc0000119-1491911889:370566..370699Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1510915933:370566..370699TCONS_00011001-exon-sc0000119-1510915933:370566..370699Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1575043694:370566..370699TCONS_00011001-exon-sc0000119-1575043694:370566..370699Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1491911889:370997..371216TCONS_00011001-exon-sc0000119-1491911889:370997..371216Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1510915933:370997..371216TCONS_00011001-exon-sc0000119-1510915933:370997..371216Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1575043694:370997..371216TCONS_00011001-exon-sc0000119-1575043694:370997..371216Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1491911889:372221..372354TCONS_00011001-exon-sc0000119-1491911889:372221..372354Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1510915933:372221..372354TCONS_00011001-exon-sc0000119-1510915933:372221..372354Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1575043694:372221..372354TCONS_00011001-exon-sc0000119-1575043694:372221..372354Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1491911889:372781..373194TCONS_00011001-exon-sc0000119-1491911889:372781..373194Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1510915933:372781..373194TCONS_00011001-exon-sc0000119-1510915933:372781..373194Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1575043694:372781..373194TCONS_00011001-exon-sc0000119-1575043694:372781..373194Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1491911889:373646..373891TCONS_00011001-exon-sc0000119-1491911889:373646..373891Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1510915933:373646..373891TCONS_00011001-exon-sc0000119-1510915933:373646..373891Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1575043694:373646..373891TCONS_00011001-exon-sc0000119-1575043694:373646..373891Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1491911889:375946..376098TCONS_00011001-exon-sc0000119-1491911889:375946..376098Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1510915933:375946..376098TCONS_00011001-exon-sc0000119-1510915933:375946..376098Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1575043694:375946..376098TCONS_00011001-exon-sc0000119-1575043694:375946..376098Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1491911889:381130..381219TCONS_00011001-exon-sc0000119-1491911889:381130..381219Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1510915933:381130..381219TCONS_00011001-exon-sc0000119-1510915933:381130..381219Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1575043694:381130..381219TCONS_00011001-exon-sc0000119-1575043694:381130..381219Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1491911889:382218..382289TCONS_00011001-exon-sc0000119-1491911889:382218..382289Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1510915933:382218..382289TCONS_00011001-exon-sc0000119-1510915933:382218..382289Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1575043694:382218..382289TCONS_00011001-exon-sc0000119-1575043694:382218..382289Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1491911889:382851..384021TCONS_00011001-exon-sc0000119-1491911889:382851..384021Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1510915933:382851..384021TCONS_00011001-exon-sc0000119-1510915933:382851..384021Clytia hemisphaericaexon
TCONS_00011001-exon-sc0000119-1575043694:382851..384021TCONS_00011001-exon-sc0000119-1575043694:382851..384021Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:369202..384021 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.40916	4.19904	1.04427	0.474039	3.10852	2.79503	3.16067	2.71483	1.78944	2.12369	2.03264	1.21314	1.62526	1.97073	2.50927	1.35651	4.69149	3.65049	0.560257	0.66063	1.68169	2.5879	8.73064	7.034	1.49305	1.19912	0.311676	1.85586	7.5419	6.80757
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011001 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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