TCONS_00010997 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010997
Unique NameTCONS_00010997
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1880

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010997 ID=TCONS_00010997|Name=TCONS_00010997|organism=Clytia hemisphaerica|type=transcript|length=1880bp
TCCTCAGTACATCGAACTTATCGGTACTATGCTACTATCGATAATTCGTT
TGCGGTTGAATTAGAACTCGACTCGCTCTTGATGTAGCGCGTGATGACCA
TCATTAGGCAAGCTCGACCAAGACTCGGCAAGGCGCCAAGATTAGGCAAA
GACCCAAGATTAGGCGGAACAGAAAAAACCAAATGAAGACATTCGCTTTG
TGGCTCAAGTTCGTATTCATCTGATTGAAGGCAATGTTCACGTCAACGGT
CATAGATTGGTTCACAACCAAATCCATCAAATTAAAATGATGGTCATAGT
CATTGACATCCTCAAAGGCGTCCGTCAACCACCCAAACGTAAAGCTGTCT
CTCTCAGAATCATGGTTGAAGAAACTAACGTCAATGGTGTCCCAAGATTG
TACGTTGAAGAAGAGTTTATTCGTATCGGTGAAATGGAGGTCGAACAAAT
TGATGTTCACCAAATCATTTGGGAATCCAGCCTCCGAAAACCCATCACCA
CCGTCAAGTTggttgaaagtaaaatccataAAAAACCAAGAGTGAATGAT
CACCCAATGTTTATCAGCGacGAACAATCAAAGCCTCATTTACCAAAACA
TGGATTCGGATACGACGAAGAAGAAATGTATGAGCGACGTCACCATGGAG
ATCACAAACACCACAAGAAACATTGTCACCATCATGGAAAACATGGCCGA
CATCATGACCATCACCATGACCATCACCATGGAAACGGAACTTTCTTCGA
AGAGAAAATGCACTCCGCTAAATGTTGGTACCGCACTCTATCGTGGAGAT
CGAAAGTCTTGCTCTTCTCCGTTGGTTTCTTTGGACTTTTGTCAGTTGTC
ATTTGCTGTGGGTTATGCTCCAAACGAAGAAGAGCCAGACGTGCTTTGTC
TATCCAAGCACCAATGGATGATAGCGTTACTGTTGATACCACAACCGAAA
AACCCAAAGCCAAGACTGGCGACAAACACGAATTCCATTTCGAATTTGAT
AACGCTGTTGTCGTCAGCGACAAGAAAGCCCTCATCTAAGAGGCTTAAAT
TTCTCTCTTCGCGAAAGACGTTAATGGACCGTTGACTATGTAGGCCGCTA
TTTCTTATAATCTATACCGCCTGTCCCCTCGCCTGTCCCAATCTGTTCAG
AGTCTTTTTTCTGTGTGTTTTTGCTTGCTTATCGATCAAGCATTGGTTTT
ATCATCTTTTGCAAACTTTCTAGCGACGCGTCCTTTTATGTCAACGGTTT
ATCTAATGTCTTATCGCAAGAGAAATGAAACGTAGAAAAATCTGTAcgtt
tcaaattcaaaatttgtttactttttatcttaaaattttttggttatttt
tattgggtaattttattgtaatatttttttggtcctttccAATTTATTAT
GATCCGAAGTGGACAATATAACAACaaacttttttaatgtttagTACTCA
AAATAACACAAGAATGAGACTCCGTATCTGTCAATAACCATTACGTCATT
ATTGTTGATACtcattttttatataaactCTTTTCAAGCCttgaaatgat
atttcatatatAATAAAGGTTCCTTTTAGTCAGTTGTATATAGCttattt
gtatttattttaagttttattcTATTTGATGTGTTGTTTatgataatttt
atttttttgtactttttttccACTGTGTTTGTATCACTGACTATATTTCA
CTATGTTTTATGATAATTGGATGAAATTTTTGCTAACAACATTTATGAGG
ACCTTACTGGTTACTTTTAGCACTGTATTCTAAACTGATTGAAAATATAA
TCATGGCATTAATAGTAAAACCTGTACGTACTACGTTTCCCTTTTTCACT
CTcatgacacccctgtgtcacagacccgct
Run BLAST on NCBI

protein sequence of TCONS_00010997-protein

>TCONS_00010997-protein ID=TCONS_00010997-protein|Name=TCONS_00010997-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
MMVIVIDILKGVRQPPKRKAVSLRIMVEETNVNGVPRLYVEEEFIRIGEM
EVEQIDVHQIIWESSLRKPITTVKLVESKIHKKPRVNDHPMFISDEQSKP
HLPKHGFGYDEEEMYERRHHGDHKHHKKHCHHHGKHGRHHDHHHDHHHGN
GTFFEEKMHSAKCWYRTLSWRSKVLLFSVGFFGLLSVVICCGLCSKRRRA
RRALSIQAPMDDSVTVDTTTEKPKAKTGDKHEFHFEFDNAVVVSDKKALI
Run BLAST on NCBI

transcript from alignment at sc0000119:328000..336803+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010997 ID=TCONS_00010997|Name=TCONS_00010997|organism=Clytia hemisphaerica|type=transcript|length=8804bp|location=Sequence derived from alignment at sc0000119:328000..336803+ (Clytia hemisphaerica)
TCCTCAGTACATCGAACTTATCGGTACTATGCTACTATCGATAATTCGTT TGCGGTTGAATTAGAACTCGACTCGCTCTTGATGTAGCGCGTGATGACCA TCATTAGGCAAGCTCGACCAAGACTCGGCAAGGCGCCAAGATTAGGCAAA GACCCAAGATTAGGCGGAACAGAAAAAACCAAATGAAGACATTCGCTTTG TGGTAAGATTTTTCTCCACATCTTCCTTCTTAACATAGAAGTGTTTGTTT GCTAAATTTCCTAGATTATTAAGGGTCGACCAATTCATTAAGTGAAAATT ATTATATGTCCATGCCATGACCATGGCCAAAGGGAGGGGGGCTGCTGGGG CTGAAGGgtaccgtgagatcaggtaacttgcatcagtggaggctaacatg ggGTTGGGGTTGGGTTTAGCATTAAGCTTGAAAGTCACTTAGAGGGACAT TTGTACCCTGAGACTTAACCGTACGGATCCTTGTATTAGTGGCACCGGTA GGGCTGGGAGCTTTGCTAATTAAGGTCTGCAAATTACATGCTAAAAGTAT TTATGAAAGACAACTTTCTACCGTGCCTCATTGGCGCAATCAGTTAGGCA TAGGGTTTGTAAACgtaggttgcttgcatttggtagttcgagccggggtc aGAGACCTATTTCACTGGTacaggcaaatttcagaaaaatacttagaaaa cagttagaaacgcttgagaaagtcagaaagtcaggatagaagataggaaa gtacaaAATAGGGGGAAGATAAGAGACAATGCATCCTGGAGCATGATATT GTTTACCAACCCTAGTAATCGACCCCTTCGTGTCTGTTTATCATTTAGTT TTGGAGGATTGGATAGAAGCccaaaaatatgcaaaatacGACATAtctct tgatttttcaagcttggtaacctACTGGGTATCTAAATTCCAATTATATA CCTtccaaattgaccaaaattaaTACTGAAAAAAGCTTGGTTTCaaacaa tttgaaaacaaaTGTACAGTAGAGCATATTCGGACCGCTGGCTTATATCA TGAGTTTTAAGACTCAGAATATGGttatattctcaacttcagttgagtta gaatctgagaatgtgtgtgtgtctgtctgtctaggtctgtgtgtatgtcc caaaactttggggcagcctggagactttaaaaattgtttgatttggctga aattttgcacacttgttccttgggtgaatatctggggtgattttttcatt ttttgaaaattttgatttttggggcctgggcNTTGGATATGTATATAACA GCCAAAAACCATATATACCAAAAGTATTTtctattaaaatttttctttat gtGCTTTGGAAATAGAATGCAAATGTGCAGCCTGAATCTTGGCTAAAATT AAAGGGATTTTAAGAAGATTAATGTTAACATTTTATAAGCAGTTATAAGG GGTATATAATTGACAAACAGACCATTTTCCATCCCTTTTTGGGTTCCTTT ATCGGATGCTGCCCTTCAAGAATTGTGAAAAATAATGGTTAAAAAAGTCT TTTNCTCTTTTCAGTCTCTTTTGCATATAATGCAAGATTTTTTTGCAAGT CATTCCCCTTTTCAACTGATAGATATTCTGCCACAATTTAAACTGTTTAT TTTAAGTCTACTAAGCAGATTTCTACTAAATTGCTACTTACCACTAATGA CACACATTTTCCCTTTGTTTGtcattttaaaaagaaactgGCTTCATAAA CAGTTACTGTATTCAGGAAGTTTCTCTTTCTCTCTCGTTTCTCTGATTAC TGTAGTAGTTAATGGAATTTTCAATAACTAAATGAAGACTCACTATCCCT AACTTCTGATCTATATCAATGTTATTTCCATTAAACatttacagtatgtg gccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNTTTTAtttataatgttaattttttgttata aactattatttcaagctgataggaatggaattccaatattttttgctgtt tctcatatttagaattttcggtttgaaaatcaatgctgattctaaggtcc caaaatactggttgacctttaagatgctgtatcttttacccatcctctaa agtcacagatgtaacTGTATTTCTGAACGGctttaggtgtagaaagtttc ctatactcCATTTTCAtaacctttttttcaatatccaaggagctagagtg agttatatgcaatttttatctaattttggtgttaaaatatttccttcaga caTAAATATGTTATtctgaatctgtctcaaactatcaaaaacatgctcat ttttaagtgtAACCATCGATCATTCTTtcagaataaacaaaaatcgttta attctgataaatctacaagtcagaatcctcattataatgacgacctccgt tttgggggccgtctccgttttgggggccatatactgtaactGAAATGTAA AATTCAGTACTTCCTATCACCCTAAATATTACTACCATTCCTTTTTTAAA GCTAAATTTCTTGTCGTTCAAAGTCataagaaatttttagaatactTCAa ttaaattaagaacaatttatttaTGTGAGAGATTGGGAACTTGCCTTCTC TTGATAGTAGGCCCGATTGGTGTAACTATCCAGCAAATTTGAAACTAAAC ACCAAATTTGGACCAGACATTCCTAATATTTCTAATACCACATGTATCAT ATTAGAAGGGCTGCCCAGAAAACTTTAAAGGATAGCTTTTCGGATCCATT CATTGAAAACCTAGGCTGGGcccaatttttatgaaaatttcaaactcatt atATATAAGCTAAAGCCAATAGTAGAATCTGAAAGCTGTCGAAAAACATA TAAAGACTTTTAAGTGAGCATGGCCGATCTGTGTACTATAAGTGGGTTGA TGAAGGTTTatagattttgtttttgaaatttatattttatatttatatcT CGCATTTTCATCGCCGAGGGGACTAGAAAATCGTATTCGATTCGGCTGAC GGTGTATATTGCTGGAAGAGATACATGGGTTTGATTCAtcggttttcttt ttttctatcttccAGGCTCAAGTTCGTATTCATCTGATTGAAGGCAATGT TCACGTCAACGGTCATAGATTGGTTCACAACCAAATCCATCAAATTAAAA TGATGGTCATAGTCAGTAAGTTATTTACTTCACCAAAGCTTTCAGACTGA CATGGGGTAATGTTTGAAAGANGCAATTTTAgccatttattatttattat ttattatatgaatacaaaattttgaccatagtttggaaatgtgatttaga gggttttgggcataaatttgtttgataaaatttttacagtatacccctgg ttgtcaaaatgcaggtttgtggcccccaaaacgtagatgtagttaaaatc aaattattaagcccagtggtaatatgGGAAAAACTATGAGCATATTTGTG Tttacccttaaatttacgacccgatggatgtaaaatttatgatttttatg aaatatttcaagattttcgatattgcaaagtccaaactgaaattttagaa attttcaaaatgacaattctgatttaacaacgtcttaatcaagtttctga aaaccaatctcttttgaaaatagttccattcatgtatcgAATAAGctttg gaaattttagaaaaaaagcttaactgaaactgaaaatattaagcttttaa ggtatttttctcctatattttgcaaaaaaaatacagAATTTGCCNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa gctagagtgagttatatgcaatttttatctaattttggtgttaaaatatt tccttcagacacAAATATGTTATtctgaatctgtctcaaaccatcaaaaa catgctcatttttaagtgtaaccatcattctttcagaataaacaaaaatc gtttaattctgataaatctacaagtcagaatcctcattataatgacgacc tccgttttgggggccgtctccgttttgggggccatatactgtaactGAAA TGTAAAATTCAGTACTTCCTATCACCCTAAATATTACTACCATTCCTTTT TTAAAGCTAAATTTCTTGTCGTTCAAAGTCataagaaatttttagaatac tTCAattaaattaagaacaatttatttaTGTGAGAGATTGGGAACTTGCC TTCTCTTGATAGTAGGCCCGATTGGTGTAACTATCCAGCAAATTTGAAAC TAAACACCAAATTTGGACCAGACATTCCTAATATTTCTAATACCACATGT ATCATATTAGAAGGGCTGCCCAGAAAACTTTAAAGGATAGCTTTTCGGAT CCATTCATTGAAAACCTAGGCTGGGcccaatttttatgaaaatttcaaac tcattatATATAAGCTAAAGCCAATAGTAGAATCTGAAAGCTGTCGAAAA ACATATAAAGACTTTTAAGTGAGCATGGCCGATCTGTGTACTATAAGTGG GTTGATGAAGGTTTatagattttgtttttgaaatttatattttatattta tatcTCGCATTTTCATCGCCGAGGGGACTAGAAAATCGTATTCGATTCGG CTGACGGTGTATATTGCTGGAAGAGATACATGGGTTTGATTCAtcggttt tctttttttctatcttccAGGCTCAAGTTCGTATTCATCTGATTGAAGGC AATGTTCACGTCAACGGTCATAGATTGGTTCACAACCAAATCCATCAAAT TAAAATGATGGTCATAGTCAGTAAGTTATTTACTTCACCAAAGCTTTCAG ACTGACATGGGGTAatgtttgaaagaaaatacttaaaatcacATGACATC AAGAGGTTTGCACTGTCCCATTTTCAAAGCAATAATAGGAAAGTAAAATC CATTAGCATTAATTTACTCTTAAACGGGTATGACTTTCCGATAGCTCGTC GTAAATtctaattaaattaaatttaattacAACTAGTTcagtgaaatttt tcatgatTCAATGAAAATGTATCCTTGACATTTCCAGAAAAACTGTCTCT AATCATTAAATtgtaggaaaaatatttttccattcgTCCAGCCTTAGCGG TGTCAAGTGAAACTAGACCTTACATGTAAATTTGGAGTATGGTTACCAGC CAACACTTAAACTCTAAACTAAATGCATATTGTTCTCTTTTTACGATTAA CAGTTGACATCCTCAAAGGCGTCCGTCAACCACCCAAACGTAAAGCTGTC TCTCTCAGAATCATGGTTGAAGAAACTAACGTCAATGGTGTCCCAAGATT GTACGTTGAAGAAGAGTTTATTCGTATCGGTGAAATGGAGGTCGAACAAA TTGATGTTCACCAAATCATTTGGGAATCCAGCCTCCGAAAACCCATCACC ACCGTCAAGTTggttgaaagtaaaatccataAAAAACCAAGAGTGAATGA TCACCCAATGTTTATCAGCGGTAATAAACCTTTCGTAACAAAAAGTGATG TAGTGATCGAACTATTTCCATATTGATGCTCTTTTGAAATTTAGTCCTGC TACAGTTGCAATTCATGGCCTGTTAAAGATGCCAGAATCCCGTACAATAA TGACTGGTTAGTGAGAGctttactgagaaatattgccctaGGTCAAGTAA CGACTGAGCTTGCGAGGTtattgcgttgaccgagggcaatattttcagta cagcccgaaaaaaccggtcattattgtatttgttaaccgtttccctcagt ttcgattgatttttagcgctttattcAGGAAAAATCTGCGAAATAAAGCG GAAAAACAAgtgaaaagagataaaaagctgttataatttctgacgtcaga aattaaaaattattgttcattttcttttgaaaaagtgacgtcacaatgaa ttttcctaacgacgggcaactctgtacagtgtaagcccgtcgtcatgcga aaagaaccaattgcattgcgccaaaagccgtgtagcccgcttcgaaaaag taaccgctTAACAATACAAGATAAAATACGGCTATGGCGGATTTCTTTAG ACTTTTCACCCAATAGGACACGAAGGAGAATTCGCCGCCACCTAGTTGTT GTTTAGTTGTTGTTTTGAGAGTTTAAAAcgttgaaaattaatttttagac GAACAATCAAAGCCTCATTTACCAAAACATGGATTCGGATACGACGAAGA AGAAATGTATGAGCGACGTCACCATGGAGATCACAAACACCACAAGAAAC ATTGTCACCATCATGGAAAACATGGCCGACATCATGACCATCACCATGAC CATCACCATGGAAACGGAACTTTCTTCGAAGAGAAAATGCACTCCGCTAA ATGTTGGTACCGCACTCTATCGTGGAGATCGAAAGTCTTGCTCTTCTCCG TTGGTTTCTTTGGACTTTTGTCAGTTGTCATTTGCTGTGGGTTATGCTCC AAACGAAGAAGAGCCAGACGTGTAAGttattgttttatttcttttttcaa agtaTTCAGTTATGGTTATTGCATAAATGTGATTGCTTTTGGGTTTAATA ACAGATCGTCCATTCTGCGCACAACACGTTCTAATCTAAAGGGATGTGTT CTGCGTGAAGTTATCAATGCCTACTTGGAGATAACGTATTCGTAGAAAAA CATCTAGAAGTTACATAATTTCATGAAGTTATTGTAATGGTTCGTTTTTG CTAAATTACAGTGCCCTTGCTTAGATCCTCACTGACGTGAATAtttactt tcttctttttgtacaGGCTTTGTCTATCCAAGCACCAATGGATGATAGCG TTACTGTTGATACCACAACCGAAAAACCCAAAGCCAAGACTGGCGACAAA CACGAATTCCATTTCGAATTTGATAACGCTGTTGTCGTCAGCGACAAGAA AGCCCTCATCTAAGAGGCTTAAATTTCTCTCTTCGCGAAAGACGTTAATG GACCGTTGACTATGTAGGCCGCTATTTCTTATAATCTATACCGCCTGTCC CCTCGCCTGTCCCAATCTGTTCAGAGTCTTTTTTCTGTGTGTTTTTGCTT GCTTATCGATCAAGCATTGGTTTTATCATCTTTTGCAAACTTTCTAGCGA CGCGTCCTTTTATGTCAACGGTTTATCTAATGTCTTATCGCAAGAGAAAT GAAACGTAGAAAAATCTGTAcgtttcaaattcaaaatttgtttacttttt atcttaaaattttttggttatttttattgggtaattttattgtaatattt ttttggtcctttccAATTTATTATGATCCGAAGTGGACAATATAACAACa aacttttttaatgtttagTACTCAAAATAACACAAGAATGAGACTCCGTA TCTGTCAATAACCATTACGTCATTATTGTTGATACtcattttttatataa actCTTTTCAAGCCttgaaatgatatttcatatatAATAAAGGTTCCTTT TAGTCAGTTGTATATAGCttatttgtatttattttaagttttattcTATT TGATGTGTTGTTTatgataattttatttttttgtactttttttccACTGT GTTTGTATCACTGACTATATTTCACTATGTTTTATGATAATTGGATGAAA TTTTTGCTAACAACATTTATGAGGACCTTACTGGTTACTTTTAGCACTGT ATTCTAAACTGATTGAAAATATAATCATGGCATTAATAGTAAAACCTGTA CGTACTACGTTTCCCTTTTTCACTCTcatgacacccctgtgtcacagacc cgct

Coding sequence (CDS) from alignment at sc0000119:328000..336803+

>TCONS_00010997 ID=TCONS_00010997|Name=TCONS_00010997|organism=Clytia hemisphaerica|type=CDS|length=3012bp|location=Sequence derived from alignment at sc0000119:328000..336803+ (Clytia hemisphaerica)
ATGATGGTCATAGTCATTGACATCCTCAAAGGCGTCCGTCAACCACCCAA
ACGTAAAGCTGTCTCTCTCAGAATCATGGTTGAAGAAACTAACGTCAATG
GTGTCCCAAGATTGTACGTTGAAGAAGAGTTTATTCGTATCGGTGAAATG
GAGGTCGAACAAATTGATGTTCACCAAATCATTTGGGAATCCAGCCTCCG
AAAACCCATCACCACCGTCAAGTTggttgaaagtaaaatccataAAAAAC
CAAGAGTGAATGATCACCCAATGTTTATCAGCGacGAACAATCAAAGCCT
CATTTACCAAAACATGGATTCGGATACGACGAAGAAGAAATGTATGAGCG
ACGTCACCATGGAGATCACAAACACCACAAGAAACATTGTCACCATCATG
GAAAACATGGCCGACATCATGACCATCACCATGACCATCACCATGGAAAC
GGAACTTTCTTCGAAGAGAAAATGCACTCCGCTAAATGTTGGTACCGCAC
TCTATCGTGGAGATCGAAAGTCTTGCTCTTCTCCGTTGGTTTCTTTGGAC
TTTTGTCAGTTGTCATTTGCTGTGGGTTATGCTCCAAACGAAGAAGAGCC
AGACGTGCTTTGTCTATCCAAGCACCAATGGATGATAGCGTTACTGTTGA
TACCACAACCGAAAAACCCAAAGCCAAGACTGGCGACAAACACGAATTCC
ATTTCGAATTTGATAACGCTGTTGTCGTCAGCGACAAGAAAGCCCTCATC
TAAATGATGGTCATAGTCATTGACATCCTCAAAGGCGTCCGTCAACCACC
CAAACGTAAAGCTGTCTCTCTCAGAATCATGGTTGAAGAAACTAACGTCA
ATGGTGTCCCAAGATTGTACGTTGAAGAAGAGTTTATTCGTATCGGTGAA
ATGGAGGTCGAACAAATTGATGTTCACCAAATCATTTGGGAATCCAGCCT
CCGAAAACCCATCACCACCGTCAAGTTggttgaaagtaaaatccataAAA
AACCAAGAGTGAATGATCACCCAATGTTTATCAGCGacGAACAATCAAAG
CCTCATTTACCAAAACATGGATTCGGATACGACGAAGAAGAAATGTATGA
GCGACGTCACCATGGAGATCACAAACACCACAAGAAACATTGTCACCATC
ATGGAAAACATGGCCGACATCATGACCATCACCATGACCATCACCATGGA
AACGGAACTTTCTTCGAAGAGAAAATGCACTCCGCTAAATGTTGGTACCG
CACTCTATCGTGGAGATCGAAAGTCTTGCTCTTCTCCGTTGGTTTCTTTG
GACTTTTGTCAGTTGTCATTTGCTGTGGGTTATGCTCCAAACGAAGAAGA
GCCAGACGTGCTTTGTCTATCCAAGCACCAATGGATGATAGCGTTACTGT
TGATACCACAACCGAAAAACCCAAAGCCAAGACTGGCGACAAACACGAAT
TCCATTTCGAATTTGATAACGCTGTTGTCGTCAGCGACAAGAAAGCCCTC
ATCTAAATGATGGTCATAGTCATTGACATCCTCAAAGGCGTCCGTCAACC
ACCCAAACGTAAAGCTGTCTCTCTCAGAATCATGGTTGAAGAAACTAACG
TCAATGGTGTCCCAAGATTGTACGTTGAAGAAGAGTTTATTCGTATCGGT
GAAATGGAGGTCGAACAAATTGATGTTCACCAAATCATTTGGGAATCCAG
CCTCCGAAAACCCATCACCACCGTCAAGTTggttgaaagtaaaatccata
AAAAACCAAGAGTGAATGATCACCCAATGTTTATCAGCGacGAACAATCA
AAGCCTCATTTACCAAAACATGGATTCGGATACGACGAAGAAGAAATGTA
TGAGCGACGTCACCATGGAGATCACAAACACCACAAGAAACATTGTCACC
ATCATGGAAAACATGGCCGACATCATGACCATCACCATGACCATCACCAT
GGAAACGGAACTTTCTTCGAAGAGAAAATGCACTCCGCTAAATGTTGGTA
CCGCACTCTATCGTGGAGATCGAAAGTCTTGCTCTTCTCCGTTGGTTTCT
TTGGACTTTTGTCAGTTGTCATTTGCTGTGGGTTATGCTCCAAACGAAGA
AGAGCCAGACGTGCTTTGTCTATCCAAGCACCAATGGATGATAGCGTTAC
TGTTGATACCACAACCGAAAAACCCAAAGCCAAGACTGGCGACAAACACG
AATTCCATTTCGAATTTGATAACGCTGTTGTCGTCAGCGACAAGAAAGCC
CTCATCTAAATGATGGTCATAGTCATTGACATCCTCAAAGGCGTCCGTCA
ACCACCCAAACGTAAAGCTGTCTCTCTCAGAATCATGGTTGAAGAAACTA
ACGTCAATGGTGTCCCAAGATTGTACGTTGAAGAAGAGTTTATTCGTATC
GGTGAAATGGAGGTCGAACAAATTGATGTTCACCAAATCATTTGGGAATC
CAGCCTCCGAAAACCCATCACCACCGTCAAGTTggttgaaagtaaaatcc
ataAAAAACCAAGAGTGAATGATCACCCAATGTTTATCAGCGacGAACAA
TCAAAGCCTCATTTACCAAAACATGGATTCGGATACGACGAAGAAGAAAT
GTATGAGCGACGTCACCATGGAGATCACAAACACCACAAGAAACATTGTC
ACCATCATGGAAAACATGGCCGACATCATGACCATCACCATGACCATCAC
CATGGAAACGGAACTTTCTTCGAAGAGAAAATGCACTCCGCTAAATGTTG
GTACCGCACTCTATCGTGGAGATCGAAAGTCTTGCTCTTCTCCGTTGGTT
TCTTTGGACTTTTGTCAGTTGTCATTTGCTGTGGGTTATGCTCCAAACGA
AGAAGAGCCAGACGTGCTTTGTCTATCCAAGCACCAATGGATGATAGCGT
TACTGTTGATACCACAACCGAAAAACCCAAAGCCAAGACTGGCGACAAAC
ACGAATTCCATTTCGAATTTGATAACGCTGTTGTCGTCAGCGACAAGAAA
GCCCTCATCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006166XLOC_006166Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010997-exon-sc0000119-1491911889:328000..328201TCONS_00010997-exon-sc0000119-1491911889:328000..328201Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1510915933:328000..328201TCONS_00010997-exon-sc0000119-1510915933:328000..328201Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1575043694:328000..328201TCONS_00010997-exon-sc0000119-1575043694:328000..328201Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1491911889:331965..331992TCONS_00010997-exon-sc0000119-1491911889:331965..331992Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1510915933:331965..331992TCONS_00010997-exon-sc0000119-1510915933:331965..331992Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1575043694:331965..331992TCONS_00010997-exon-sc0000119-1575043694:331965..331992Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1491911889:333748..333819TCONS_00010997-exon-sc0000119-1491911889:333748..333819Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1510915933:333748..333819TCONS_00010997-exon-sc0000119-1510915933:333748..333819Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1575043694:333748..333819TCONS_00010997-exon-sc0000119-1575043694:333748..333819Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1491911889:334253..334519TCONS_00010997-exon-sc0000119-1491911889:334253..334519Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1510915933:334253..334519TCONS_00010997-exon-sc0000119-1510915933:334253..334519Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1575043694:334253..334519TCONS_00010997-exon-sc0000119-1575043694:334253..334519Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1491911889:335198..335520TCONS_00010997-exon-sc0000119-1491911889:335198..335520Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1510915933:335198..335520TCONS_00010997-exon-sc0000119-1510915933:335198..335520Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1575043694:335198..335520TCONS_00010997-exon-sc0000119-1575043694:335198..335520Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1491911889:335816..336803TCONS_00010997-exon-sc0000119-1491911889:335816..336803Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1510915933:335816..336803TCONS_00010997-exon-sc0000119-1510915933:335816..336803Clytia hemisphaericaexon
TCONS_00010997-exon-sc0000119-1575043694:335816..336803TCONS_00010997-exon-sc0000119-1575043694:335816..336803Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010997-proteinTCONS_00010997-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:328000..336803 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
56.2279 55.7835 72.9674 76.0047 146.652 107.198 103.899 115.132 244.956 155.506 290.303 118.267 198.843 147.834 48.1553 63.1065 52.5488 62.5463 254.629 385.317 146.787 146.296 89.0812 124.314 199.246 132.502 257.665 317.832 36.5654 32.3485
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010997 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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