TCONS_00010934 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010934
Unique NameTCONS_00010934
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length379

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010934 ID=TCONS_00010934|Name=TCONS_00010934|organism=Clytia hemisphaerica|type=transcript|length=379bp
gttttccaatatgtttaaaatgcactgtaagggtcggaaaaactagagat
gcactgtaagggtagaaatttcagaaaattcttgaaaaatctagatattt
tgacccaaaatgctagaattttgaccattttttgcacgaaagggatcgaa
aataNAAAGATAAGATCACATTGAAATTCAGGACCATTGATGCATCTGGT
GTTCTTCTTTACAGCTGTGGCGAAGAAGGAGACTTCTTGTTGTTGGAAAT
GAAGAGAGGCAAACTTGTGTAAGTGTCATTTATTAATTTTCACCTTTTCC
CGGTTAATGCATGCACTGGCATGACCTGTTAGGGGGTTAGCACCCTTAAC
CTTATCATTAACGTAGTCGAATGTCCTTC
Run BLAST on NCBI

transcript from alignment at sc0000118:20421..20799

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010934 ID=TCONS_00010934|Name=TCONS_00010934|organism=Clytia hemisphaerica|type=transcript|length=379bp|location=Sequence derived from alignment at sc0000118:20421..20799 (Clytia hemisphaerica)
GAAGGACATTCGACTACGTTAATGATAAGGTTAAGGGTGCTAACCCCCTA
ACAGGTCATGCCAGTGCATGCATTAACCGGGAAAAGGTGAAAATTAATAA
ATGACACTTACACAAGTTTGCCTCTCTTCATTTCCAACAACAAGAAGTCT
CCTTCTTCGCCACAGCTGTAAAGAAGAACACCAGATGCATCAATGGTCCT
GAATTTCAATGTGATCTTATCTTTNtattttcgatccctttcgtgcaaaa
aatggtcaaaattctagcattttgggtcaaaatatctagatttttcaaga
attttctgaaatttctacccttacagtgcatctctagtttttccgaccct
tacagtgcattttaaacatattggaaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006139XLOC_006139Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010934-exon-sc0000118-1491911889:20421..20799TCONS_00010934-exon-sc0000118-1491911889:20421..20799Clytia hemisphaericaexon
TCONS_00010934-exon-sc0000118-1510915933:20421..20799TCONS_00010934-exon-sc0000118-1510915933:20421..20799Clytia hemisphaericaexon
TCONS_00010934-exon-sc0000118-1575043694:20421..20799TCONS_00010934-exon-sc0000118-1575043694:20421..20799Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000118supercontigsc0000118:20421..20799 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.322799	0	2.09574	4.1839	8.28719	10.2521	4.02402	2.60538	8.56444	5.073	2.63806	1.73951	0	0	2.63146	2.29412	4.07431	8.28144	5.02418	6.08414	0.53934	2.36751	3.12646	1.47635	3.50596	2.54251	0.473921	0.0807799
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010934 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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