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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010889 ID=TCONS_00010889|Name=TCONS_00010889|organism=Clytia hemisphaerica|type=transcript|length=1970bp
ggaaaaatcaataaaaatattaaaattaagattttcaatGTTATCAACCT
TACAGAGAAGGTCAATTAACACCTTCCACAGTACAAGATGTTGTTGCTCT
CTCCTGCAATCACAAAACTATGGATATCCTAAACAACCAATCAGATCTCA
CATATCTACTTCTCAGCCAATCAAAAGCCGCCACTCaaattttcaaccaa
taagaaaTCAGCTTTCAGTTTATCAACCAATTAGCTTCCAGCTTAGAACC
AGTTCATTGAGTGTTTCTACAACATGGTCGTCAATCAGGTGTTACAGTCA
AAGCCTGAATGATGGAAAAGATGATCAGAACGTTCAGAAACAAAGGCCAA
AGAGAATTACCACGTTTCAAAAGGTCCGATACATGGTGGATATCTTTTGG
GCAGGATGCAAAGCCTTATTTAGAGATGTACGTTTGGCATTGAAAACGAG
GCGGAAACTTGGCTTGTATCACGTTCGTGATTATTCAAGATTGACCAGAG
AAGAATTGAGGCATCTCAGACAGACAAGGCAAGATGTAGTGAAGACATTC
CCAGTTGCGTTATTGTTCATGGTACCTTTCATTGGCTACACTGCTCCTAT
ACTCGCCTATTTCTACCCTCGGCAGCTTTTGTCGCAACAATTCTGGCATC
CTGACCAAAAGAAAGAGTTTGTTTTGGAAGAATACGAGAAGAGAAGTCAA
TACTATTTACCGTTGATCAAAGAGTGTGGCATCACTGCTAAAGAAATTGT
CAATAAAGACTTGTTGAATTTCTGTCTCAAGACAATAGACGGTTCATACC
CTGAGAACGAAGAATTATTGCACTTCGAAAATGTATTCTCGCAGCACGAA
GATTTTTCCTTACAAAAAATGCCACGATATCATCTTGTGAAGATTTGCAA
GTGTTGGTTGATTCCGACCGGCTGGTACCTACCACGCTGGTATCTGATCA
ATGTTTTGAATAAGCGGATCCTCAAATTACACGAGGATGATGTCCTCATT
TTGAGGGATGGGATTGATACTCTCACACCTGAGTGTATTGAACAGGCAGT
TCATGTTCGAGGCTTAGACGAAGCTTCGTTGAATGATGAATCGAAGAAGT
TTTGGTTGAAAGATTGGATCGAACTTTCCTCTAACGTTAAAGGCAAAGAT
ATCTCTTTCTTGGCACACAGTGCGGTCTTCAAAGCGGCCAACTTTGAAAT
GTTGCAACAAAATGGTAGCAAAGTAGTGGATCAAGTGGAATCACGTTGAA
GTCAAAGAGTTGTGTGTTTTGATGTCGTGCAGGTATCAAATTGGATGTGT
CTGTCCATGAATAGAAGTTGTAGTCGACTGATTCTATTGACATATCAAGA
AAATACAGAACAGGGCAATAAAGCAGGAACAAACCTTTAGTCTGtatgaa
aaatttcatcaagcTATACTTGCTCTTAGACGATGTTGGTAAAGGGAATG
ACAGAGCTTATGGTGTTGTGTTTGTGAACTAGATGGTAAAGAAGATGTTC
CTAAAAAACGATGCTTCGACTTTAACCCTAGTTGGCTCTGTACCGAGAAA
CGCTGATTCTTGATATCATTGCATTCATATTGATATTCATGCACTTCATA
CCTGGATATactaatgtttaaaaatgttgATACCTATAATGCTCGTCCAA
AAGAAGGTAAAGAAGGAACTACTTTTCTTTGTTTCATGGTTGAGAATGTT
GTTTTTACTTAGAGGAAAGGTACTAAGAGCTCCCATGCTATGAAGTGAAG
ATTTGTTTCAGGTTGGCAATGAAGGAACTAAGCCGAACACTTTCAGTTTA
TGCTACCATTTTATCTATAATGAGACCCCCAGctgttttcgtgatggcgt
gatttgGCGTTTTTCAAGTTtgtgatttcgtgatttaagattttaaagtg
cgtGATTGCTGCGTGATCGGAGGAACCAACGTGATTAACGTGATCGTTTA
ACTCGGAAATTTAACTCGTg Run BLAST on NCBI transcript from alignment at sc0000118:220464..235497+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010889 ID=TCONS_00010889|Name=TCONS_00010889|organism=Clytia hemisphaerica|type=transcript|length=15034bp|location=Sequence derived from alignment at sc0000118:220464..235497+ (Clytia hemisphaerica)
ggaaaaatcaataaaaatattaaaattaagattttcaatGTTATCAACCT
TACAGAGAAGGTCAATTAACACCTTCCACAGTACAAGATGTTGTTGCTCT
CTCCTGCAATCACAAAACTATGGATATCCTAAACAACCAATCAGATCTCA
CATATCTACTTCTCAGCCAATCAAAAGCCGCCACTCaaattttcaaccaa
taagaaaTCAGCTTTCAGTTTATCAACCAATTAGCTTCCAGCTTAGAACC
AGTTCATTGAGTGTTTCTACAACATGGTCGTCAATCAGGTGTTACAGTCA
AAGCCTGAATGATGGAAAAGATGATCAGAACGTTCAGAAACAAAGGCCAA
AGAGAATTACCACGTTTCAAAAGGTTTTTTAATTtccttttaattttact
ttaaaaggtCTCTTTGTAATCAATTTTGGGAATAGTGGTTTATAATACGC
CGGGTAATTCACATAAAATTGCACTCGAGAGACATAAAGAAGATTGTAAT
CGAATCACTTACAATTATTATTCCATACGGGAAAATTGACGCTAAATATA
TGTGGACAATGAAAGAATTGATGTAACTCAgagaaaatttatcttttttt
aaagatgTTTTGGGAAAATCTCAGTATTGTATAGAAATGTGTCTAATaag
tgcttttttaaacacACCCAATATAATACCTCGATATGGCTAAGGGATAC
CTTAGCCTTTTTTGACGAAGATAATTCACTATTAGTTGCAGTTGCAATTG
TGTCTTTCAGTGACTATTTATTTCATATCTGTAGATTTATCGACCCAGTT
ATAGACATTAGTCGTTGTAGTTATTGGGAGGAATATACAGCCTATCTAAT
CAATGGTAaactttcaatatatttttgatttgtaGGTCCGATACATGGTG
GATATCTTTTGGGCAGGATGCAAAGCCTTATTTAGAGATGTACGTTTGGC
ATTGAAAACGAGGCGGAAACTTGGCTTGTATCACGTTCGTGATTATTCAA
GATTGACCAGAGAAGAATTGAGGCATCTCAGACAGGTTTAAATGAATTTC
TTTAATTGACACATTGggttattccagaaatagtctgtaccccctatgtt
gaagaggtgtgacgtccagggtggtatgggaataaaaaatccagggtggt
ccagtttttcagagggaaaaaatccaggggggtcCGGTTTTTTGAGTGCA
AAAATCCAGGGTGCTTACCATATGTTGAGGaggaaaatccagggtggtcc
agatttttcagaggaaaaaaatttcatggatTTTTTAATCTATTGACACT
ATAGAGTTTGAATGCTTTACCCAATGTTGCGAAACTTTTCCTGTTTGTAT
CAAGAATTTATTCCGGTCTCAATAACAACGGTCTTGAAAGTAGCAGCTCG
TAGAAATTCGAATCAAGATTTGGACCTTCCCCTCTCTCCAGATTCTTCAA
ATGTTCTACTGCAGTAGCTTCTCTCTAATTTTGATCTTCAAGGGATCATG
AATTCCCTGCGTtgtagaaagattcaaattacaAAGAGTCATTTATATAT
ATCCCCCAGATAATTGCCCCGGGACAATAACCCCCAGACAATCGCTCCCA
GGACAATTACCCCCAGACAATTACCCCCAGACTATTGTCCTAGGCAATTT
GATTATTCTTGTATCTTGAATTTTATGGTTAatacttttataagaaaatt
catTACATATTTTTAGGTTAACTCTTTATTCATGCAAATGTCACGGGGCA
ATTGTAACGGGGCAATTGTaacgggggcaattttcctgtcACCTGGGATA
CGCAGTGATGAGGTTTGGAATTTTGATTACACATTCTTACACTTTTCTTC
CAATAGACAAGGCAAGATGTAGTGAAGACATTCCCAGTTGCGTTATTGTT
CATGGTACCTTTCATTGGCTACACTGCTCCTATACTCGCGTAAGTATTGT
CATTGGCTTTGTCGATTACACGTTggttataagaacaaactatatgagtA
CGTAaagcttcgatagccaaaatagtAAGAACAAAGaacatacagttgac
gctctctaagtccccgtcaacaagaaactctcataaacgactcTACCTTA
TTCGATAAGTTCCCTTATTCGacgaaaatccaattccccttgaagatcga
attagagagcgtcaactggaTGAACATAGACCCTAAATAATCGAATTTCT
CAGGAAGTTGTACAAAAGtacccacaaaatggtgaaattaagaacatttt
aagatcatgcttaggcttaaagctcaatacgttaagaacatccgaaggct
ttttTTGACTTGGGTATAGTTTTGTTTTCGAAATGAATCTTGTCAACAAA
CAACAtccttttataagaaaaattcacttcGAGTAAACAactttgaagat
gaaaaatgacaGGAATCAAGATTCTAGGTTTACTCACTTCTCTGGTTTAA
TCAAAGTACTTTTATGGCAAAGATTTCATTAATGTTCCTTGGTTGTATGG
ATTTATTTGATCTTGCCGCTAACTCAGCCAATGAGATTCAGACGATAAGA
TACCGGGAGCTGGTGCTGTGAGTAAGGTATGGCGCTTCACATCAGCATTC
GCCCTGCCAGGTCTAgcctagactatgttatagtctaagacgaatcacta
tctaagaaaaaagcccaaagccgaagaaaattcggaaacgggtttttttt
gccgaaaagagtttacagtcggtagagttgccagtcttagactatacgat
tttggcacaaaatacaaaaacagcccAAATCGTACAAATTCGAGTTTTCG
TATGCGAGGCCAACTGTGTTCggtattcgaaaaaatcaaaacaaaaaaaa
agaggcgGGAGAGAAACTGAGATAAAAAAGAGAGTGTGGTTCCAAGAAAT
ATCATAGTTTTCTTTGGAGACCCTCTCCCTTTTATTCCCTTTATATATTC
TTGGAACTACACTCTCTTTTCttagaaaacaaatttttatgaacagtcat
tttttaaataagtttgtaatttctttgcaacaaggatatctatctaaact
ttcacgttataaatttcttaaaaaacatcaaatcatgtaagtttgttttt
tctttttgcctgaggattatatccttatatttaccccttttatatataaa
attccATGTAAATAAAAAGCTATAGTATCTTCTCCCCACCACCATTGCTC
AAAGACAAAGGAAACGTATAAAAATTATTGACAGTTCAAATACTTGCAAT
TTGTGACTttcctttttgataaaaaaatatacagtAGTGGATGAAAAATC
TTATGATAACTCCAGAAGTCTGGTGTAAATTTTTCCaggtcataatctca
aattatatcaGAGCGTCAAGTGAAAAAATGCAAGTCATGATAACATATTT
CAGTAAAACAGTCTCAATTTATGATTAACCAGGGCATCATGgtaaaatat
tccaagtcataatctcaaattgtaccaggacgtcaagtgaaaaatTGCAA
GTCATGATAACATATTTCAGTAAAACAGTCTCAATTTATACCAGAGCATT
Ggtaaaatattccaagttataatctcaaattgtaccaggacgtcaagtaa
aatattccaagtcataatctcaaattgtaccagaacgtcaagtgaaataa
gttataatctcaaattaaaccaggacgtgaagtgaaatattgcaagtcat
aatctcaaattgtaccagaacgtcaagtgaaatattccaagttataatcc
caaattaaaccaggacgtgaagtgaaatattgcaagtcataatctcaaat
tgtaccagaacgtcaagtgaaatattccaagttataatcccaaattaaac
cacgatgtgaagtgaaatattccaagttataatctcagattgtaccagga
cgtaaagtgaaatattgcaagtcaTAATCTCTGTTGTACCaaaacgtcaa
gtgaaatattgcaagttaTAATCTCAGATTATACCAGGACGTcgtgaaat
attgcaagtctTAATCTCAATAATAAACCAGGATgatgtgccaaatattt
catttcggtattgtgctctctgcaaattactgccatattttcccatgcat
ccaatttctgaatttctgattcttacctagaaaatttagaataataatcT
GATAATATTTACAGGTACGACTAGGTAACTGAACTTCTCGACAAATGTGA
AAGTTTTCGAACAAGAAGTATATTAAAAGCAGTCTTTTAAAGCCCACAAT
TGACAATAAGTACTTTGTTTAAGTAAGTActatttttcaaagcttttcaa
agttgtcaaagaactgctaacaccagatgaaaataactttttaagagTGG
AGATATGAGGGTATTCACATATCTAATGAAACACTGCCTGTGATTCATAG
GATTCGTAAGAAATATACAAACTGACTTACCTACTTAGTTTCTCTGACTC
TGTGTCTTTTTGCTGTTGTATGTAGACttgttgaaaaatcattttaaaac
agtATTCTACAGAAGCATACTTGAGGAATAAGTACTCCCTTAAACTAAGT
CATCTTGTAgtctcaataaaacaaaaatgaaccaagaagaaaaattccat
aatgagctggattttcacagaaaaaccACAGATCCATCTTGTCCTTGTGT
CTTCTTTCCAATGACCAGCGTGTTTTTGATCGTTTGAACCAAGCTCGGCC
TTTAAACTTAGGCGGTTTTCACCACGGAGCGACTAACCAGTCTCACTGGT
TAGTCCAAGCANGAATCTTTTTTATGCCAAAGAgttatcgtccgtttctt
cgaaactctcccgccgatttttttccgtataccgccataacgccataccg
ccatttttccccgcctttactatcactgtaacggacgataacatcgtcta
ggtCTAGCCCAACTCTTGAAAAACATTGACTCTCACTCCCGGccccgccg
acagccaccagattaatgtacttacttactttgttttgattcttcAGCTA
TTTCTACCCTCGGCAGCTTTTGTCGCAACAATTCTGGCATCCTGACCAAA
AGAAAGAGTTTGTTTTGGAAGAATACGAGAAGAGAAGTCAATACTATTTA
CCGTTGATCAAAGAGTGTGGCATCACTGCTAAAGAAATTGTCAATAAAGA
CTTGTTGAATTTCTGTCTCAAGGTTTGTGATGACGGGAGGGGGTTAAGAC
TATTTACCGTTGATCAAAGAGTGTGGCATCACTGCTAAAGAGATTNAAAG
AGATTGTCAACAAAGACTTGTTGAATTTCTGTCTCAAGGTTTGTGATGAC
GGGAGGGGGTTAAGACTATTTACCGTTGATCAAAGAGTGTGGCATCACTG
CTAAAGAGATTGTCAATAAAGACTTGTTGAATTTCTGTCTTGGTTTGTGA
CGATTGACGATCCAAGAATTGACCCTGATTGACAAATAATGAATAACTTC
ATGGGTCATGATTACTCTGGAACAACtttttatcggtgacccaaaaaata
tctgcaatctgattggctaaaaagagtacaatatatcttgtattttacat
gtaaaaatataaattgacgaaaagatgtttttgcattgtagcggtagcag
caatctaacgtcactttagtacaaaagtgccctgcgcttttttccaacac
aaaaagtgcattttttgggtcaccgataaaccagttatcagacctttgct
cgtacaatatggaaatatttcactcgttccagattttttccgtatatttt
ccttgGAACCTCTTCTTACAACCATTTTTCTAATTGTTGGACTAACCTGA
CATGTTTTGCCAAATAACCGCTCTACTAGAGATTTTCATATGTTTCTATC
TTTCAGACAATAGACGGTTCATACCCTGAGAACGAAGAATTATTGCACTT
CGAAAATGTATTCTCGCAGCACGAAGATTTTTCCTTACAAAAAATGCCAC
GATATCATCTTGTAAGAAACTGATCGGTctccattgtttttttctttttt
tggacaaaatttatatttaagaCTGTCAGACGGCCGGTTTTATGTTTTGG
CTGTCCCTGCAAGGCCCACGCCATGAAATGgagtctaaggaggcgcaacc
aaagagttttactttgtaaaaagtGACCTGTCCCAATACTGGATGAAAGC
TCGACAAACAAAGTTTTGTCATTACGACTTAAAGGTTACAGGGTCgttta
ttttagtttatttcCGCTAATTGAAAGGAATAATGATAATGCACGGATTT
CTAAGTAGTTCATTTTAATTCCATGTAATTAGCACGAAATAATATCAGTT
AAACAAATCATCATCATTGAATCATATGAAACCCgtgtatacaccttttc
gaccatagccgccaattgccgcgcggacatttttttgtccgctttatccc
actaataccgtcccaatccttttttcgcacctttAGACAATAGAAgaagg
tgtcaaaaaaggattggatctagtttagggggataattgaatatttcccc
gctataaggggaaatattagttaaaaaggcatttctccgatccttggcta
cttacgccctttttgcgcccttaaaggggcaatccgccaccacattgcga
agttattttttgttttcatttgccttAGTTATTCAGACAAAATCGAACGG
ATTTACCTTGATGTTACGCGCATGTCTTTGAGTAATCAAGACACGAATAA
TTCAGATCAAAATACAAGATGTACGAAATGGACGAAAATTCACTCTTGgc
tttttaaaagttataactcttttctgacgaacaaaaaacatacaattttC
ATCTAATTGGCGACCAATAATTACATGAAATGTGAGGCCAACACTTCAAC
TGTAATCGTCAGTAATTTCTAgagtttttcatcattgattacaaagatat
gCATGGATTACCTCTTCCGAATATCAAAccaaccaacttaaagatttcaG
AGACATTTGCTTGACATGAAGAAAACGCTACATCCCCATAACTTTGGACA
TTAAATGGTTGGGAAAATGGTATTAACATTCTATTGAGATGTGAAACTGG
Ttcaagttgaagaattgatgagaaaaatgggcagtacgagaaatattttt
gctttgaaatacaAACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTGTTTTCCTGACTAAAGACACTTTTGA
ATGTGTGATTGTTTTCCCTGACTAGAGATACTGTGAGCGTGTATTTAATA
AACATATTGCATCTTGGCTTAGagatatttttgaatgttttaacgGCGAC
GTCATTTCTTGTTTGGATTGTTGTAGTGTTATCTTTTAgaggggtcactc
acaaatcgattcttcccacgactaacgtcaaattgacgctaatttgaaaa
ccccccacccccacctcttaacgtcaaagttaaaaattatcaaaaatcga
tgaaaattttctccttcactttcattgtaggctgctggcatccactaacg
gattcgtgctccttatagaggatgcttaataagctacatttcctttgtcc
agagatttgccgcctttagccgatatacggctaaagacatttttagctgg
cgagtgtctacaaatataacattacgtaatgtttaaatNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcataaaacta
cattttgatgctttaatttggacttgcatgagtgtataattttttaccac
actggattcgttgatcactttggctccagataattgttttttcAGTTCTA
ACTTCTACAGATATGtggcagattatttcaaggtattctagtcatgtata
tacagtacatttttggggtcatattgaatatttctgacattacttcttta
tgattctacaaaagggagtgttgttgttccttcaacaagggcctttNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNtcgccaagatttcctttgcgaaccggaaagcggttg
gtagatcattaagcagacctatactacctgtggttttgtagaggtctgcg
attcagactactttCATTGTTGTTTcgtcgtcagccatctttaatttcgc
tacggcttgctcaggcagataatttctaaactgttttcagaaagttgCCG
GAATTAATTATCTTCATAATcataaccagacggtgtcaatcgaacaactt
cgaacggaaatcgcaatcgaaccaatcgaacgcgatcaaatgattgcgat
tcgattgccgaacatttatacattttttaatatacattatataataatat
acattttgtgcttaatctgaggtttacattaagtgtaatttttaaaacac
atgaCTACAATATGCAACGTTCCtcactttgacattttcttgttaTGAAC
TCTCATTacgctctttttttataaaagaaccatgaaatttgagttaagcc
taggcttgttcttattttttctattgtctagaaTAATAGACCTATTGTTT
CAGTAAGCCtgattgttctcataaaaaaagagtgtatgctgttaaccctt
tcagtaccgagcccttttttctatttttttagcctacacttttttttata
agcgtatCGTAATGCCCGAagtttttatcatcttatcCTGGGTCAAGctg
aagtttttacaagttctttgatgactctgttggtcgttaaatgtcatccc
tattgtttgaaaataaccaatcagttaagcatgttgtaaaaactccaagg
catctcctTATCCTGGAGATCagcttacttttttaaatacagtagagtct
caataactcgaacccctattactcgaacgtctccttaactcgaacaaatt
cgttggcagcatgaaaatctcctaataaactcttataaaaaacctccATA
TATCGAATGTTCCCCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGCGCAAGCCTGGACGGCCTCAagttgaaacgtttttt
ttttcgatcaggCAGTCCattagtctgattcgcagacctatactttctat
aggtctgcttaatagtGTATGGATTGGTTTCCCGGTACGGTGGCTCTTAT
GGTGGCCGACTCGTGCTATTTGGCGAGTTGCTAAATTTTATGGGAACTCG
AATGCGAgttaaaagataaacaaaagaaatcaaagtgaagacattCCAGT
GTCAGACGGATTCCATTTTGCCACTGGCACgccttttcgaatgtttcttt
tattttcgaatgtttttttattttcgaatgttttgatattagGAGCTTTA
AGTCAAcgaatttgaatttctcaaaaactttgaaagaaaatttcactATA
ACTATTTGTTTCTAAAGAACCCTCTTCAGGCTAGTTAAATGAGACATATT
GGGTTtcatcaataaaactgattccaGCATTCTTCCCGTCCCTGTCAAAG
TTtaacaaaacaaagaataaCAGAATCTGCTGctgcactttttcaaacaa
cTTTAAGTAGACACAAAGTAAAAGGGAAGAAGGTTCTCTGGAAAGAGATA
AAGCCACAAAATGATATTACTTACAACAACAATCTTTCCCTATCATAAGC
TTCTAAAATAACCACATACCTGTCAAGACCTGTTACTGTATCTTTTCTAC
ATTCGTTCAAAACGAACAAAATGTccaccaaaacaaatcaaaattccaCA
TTATAAGCTTGATAACAAATGTTCTAGACGGTAATTTATTTTATTGGTAC
ACATATTATATACTCTAAATCTTGTAATTGTATTAACAAAACTTCTTTCG
CCTTAAACAAACTACCCCAAATTAAAAACAAGTACTCGAGCTTGACGAAA
ACCACTTCCCGCTTCGAcggccatcttgaatttgaacAGCGAAAGCTATG
CTACTTCGTAACAGGTAGAGTACCTTTGCAAATNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAAATTAATCATCATAAGCACTCGCCA
GCAAAAATAGCCCTCTCGCCGAATTTCGGCGAGAAGCGGCATTTTGTTGG
AAAGAAGATTTACCGAGTATTAAGTAGCCTATAtctatcccaacacgcga
tttttttatcactctgtTGTTGATacggtgtcgaggaaaaagccgtggtc
gtctggtacaggctaagtattaagcagcctctataagaaacttttttcgc
tagaggatgaacAGAAGCAAGCCTAGCAGTCCATCTGCAAGTGTAagggg
aaatatttagtcgcatttgtgcgaatcttgttaaataattaaaaatggCA
CGCGCGCTGACCGcgtgactacggtcgaaaaggtgtatttctaTGAGCAA
ATTTATGCAAATCAATGCACAATTTTTCATCATCTTTTCACTCATCTTTT
TTAAGGTGAAGATTTGCAAGTGTTGGTTGATTCCGACCGGCTGGTACCTA
CCACGCTGGTATCTGATCAATGTTTTGAATAAGCGGATCCTCAAATTACA
CGAGGATGATGTCCTCATTTTGAGGGATGGGATTGATACTCTCACACCTG
AGTGTATTGAACAGGTAATATAAAGtctaaagaaattgaaaatacatTAT
ATAGTTTACGCTCTTTAATTCgccgttctactattcgatagctCCATATT
TCGATATTAAAagccaccgtcaacaagaaactttaaaaacgacgctctac
tattcgtgACGCTcccttttttaatgaaaatctgattccccttgaaaatc
gaattagagagcgtaaaCTATATAATGTTACCTCTTTAAAGGCATCATGT
TTTTGAGAATACTctgcaaaaaaagtttgtttgcaAATTTCAagagaatt
ttttatcaaagattCAGGAGTAAAAAGATTTCCATTAATCCCTTTCTTGC
CCTCTGATAGGAGAATAATCTCTCGCAAAAGGATCGAATATAGGGATTGT
GTACGTTTTCTTCAGCAATACTCCATTGCAGTGCTAAAAGTACATCTGAA
CACATATTTATGTCTGAACGAAgtaaaactttcattttcattttccgtCT
CGGACGAACAACTTGGTTTTGACCCTGCATCGAATAAAAAACTCTTTTCT
TACAAATTCTTGGTTGGGCTCGATGACCCAAGTTCCTCCTCTCCAACTTG
TTGACTCGATTGTTCAGGTTGTTCACTtgcaatttcattttattttgcag
GCAGTTCATGTTCGAGGCTTAGACGAAGCTTCGTTGAATGATGAATCGAA
GAAGTTTTGGTTGAAAGATTGGATCGAACTTTCCTCTAACGTTAAAGGTG
ATTATACCTGCAGCGAACTGggtttttacaaaattcttttttcgtttttt
ttttttttttttttttttttttttttttttttttttttggtttgacgtaa
gaacaatttttgaatttgctTCAGTAAGGgttgagaaatttaaaatttac
ttttaagaaattccaaagccttaaaaactttttaagtatGTCTTCACCTA
TCTACTCAGTCCAAGGACAAAGGGATGTTCTAATGGAGGGTAACATCAGC
GCCATGAGCTTCAAAACATTATTCATAGTGttcccccctttataaagggg
gattctgattttgcCCCATTTTTTAAGTTATGGGgggaaatgaaaaattt
atgggGGAAATAAAAAGGGGGGGAAACcataaattttgattgggggaact
tcactgatcCCAAGGTAATCTCATAGAAGACCagtttaagcaataaaatc
agcaaaccTTACTTGAACCaaaccaatttttcaataaaacttcattttca
agcagtttccaGGCTATAAtttcaagctttccaaaactttaaacttgatt
taaggcatttttatgttaaccatatggggGAACTGCATAATAGTCAAATA
Actggggaaagcaaaaaagaggggggaaccgaaaaatttttaaatatggt
gagggataaaaaagaggggggttggggggtacttaggcaaatggagggta
cggtatgtgccgcccttaagggtaccttttttggacttccaaagtcccgc
taagggtcggaaaaatcagaaaatcNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTCATTTTCAAGCA
GTTTCAAGGCTATAAtttcaagctttccaaaactttaaacttgatttaag
gcatttttatgttaaccatatggggGAACTGCATAATAGTCAAATAActg
gggaaagcaaaaaagaggggggatccaacccaggaggacactatgttaTT
CCGAAAGTAATTATAGTAGATGTTTTCATCTAAGTTTCTCACATCAGATA
TTCTAGTCTAGAAACTTAATTGGTCTTccgttatttttgttttttctttt
gttcagGCAAAGATATCTCTTTCTTGGCACACAGTGCGGTCTTCAAAGCG
GCCAACTTTGAAATGTTGCAACAAAATGGTAGCAAAGTAGTGGATCAAGT
GGAATCACGTTGAAGTCAAAGAGTTGTGTGTTTTGATGTCGTGCAGGTAT
CAAATTGGATGTGTCTGTCCATGAATAGAAGTTGTAGTCGACTGATTCTA
TTGACATATCAAGAAAATACAGAACAGGGCAATAAAGCAGGAACAAACCT
TTAGTCTGtatgaaaaatttcatcaagcTATACTTGCTCTTAGACGATGT
TGGTAAAGGGAATGACAGAGCTTATGGTGTTGTGTTTGTGAACTAGATGG
TAAAGAAGATGTTCCTAAAAAACGATGCTTCGACTTTAACCCTAGTTGGC
TCTGTACCGAGAAACGCTGATTCTTGATATCATTGCATTCATATTGATAT
TCATGCACTTCATACCTGGATATactaatgtttaaaaatgttgATACCTA
TAATGCTCGTCCAAAAGAAGGTAAAGAAGGAACTACTTTTCTTTGTTTCA
TGGTTGAGAATGTTGTTTTTACTTAGAGGAAAGGTACTAAGAGCTCCCAT
GCTATGAAGTGAAGATTTGTTTCAGGTTGGCAATGAAGGAACTAAGCCGA
ACACTTTCAGTTTATGCTACCATTTTATCTATAATGAGACCCCCAGctgt
tttcgtgatggcgtgatttgGCGTTTTTCAAGTTtgtgatttcgtgattt
aagattttaaagtgcgtGATTGCTGCGTGATCGGAGGAACCAACGTGATT
AACGTGATCGTTTAACTCGGAAATTTAACTCGTg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010889-exon-sc0000118-1491911889:220464..220836 | TCONS_00010889-exon-sc0000118-1491911889:220464..220836 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1510915933:220464..220836 | TCONS_00010889-exon-sc0000118-1510915933:220464..220836 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1575043694:220464..220836 | TCONS_00010889-exon-sc0000118-1575043694:220464..220836 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1491911889:221349..221498 | TCONS_00010889-exon-sc0000118-1491911889:221349..221498 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1510915933:221349..221498 | TCONS_00010889-exon-sc0000118-1510915933:221349..221498 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1575043694:221349..221498 | TCONS_00010889-exon-sc0000118-1575043694:221349..221498 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1491911889:222320..222402 | TCONS_00010889-exon-sc0000118-1491911889:222320..222402 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1510915933:222320..222402 | TCONS_00010889-exon-sc0000118-1510915933:222320..222402 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1575043694:222320..222402 | TCONS_00010889-exon-sc0000118-1575043694:222320..222402 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1491911889:225461..225635 | TCONS_00010889-exon-sc0000118-1491911889:225461..225635 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1510915933:225461..225635 | TCONS_00010889-exon-sc0000118-1510915933:225461..225635 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1575043694:225461..225635 | TCONS_00010889-exon-sc0000118-1575043694:225461..225635 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1491911889:226320..226424 | TCONS_00010889-exon-sc0000118-1491911889:226320..226424 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1510915933:226320..226424 | TCONS_00010889-exon-sc0000118-1510915933:226320..226424 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1575043694:226320..226424 | TCONS_00010889-exon-sc0000118-1575043694:226320..226424 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1491911889:232369..232527 | TCONS_00010889-exon-sc0000118-1491911889:232369..232527 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1510915933:232369..232527 | TCONS_00010889-exon-sc0000118-1510915933:232369..232527 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1575043694:232369..232527 | TCONS_00010889-exon-sc0000118-1575043694:232369..232527 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1491911889:233164..233260 | TCONS_00010889-exon-sc0000118-1491911889:233164..233260 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1510915933:233164..233260 | TCONS_00010889-exon-sc0000118-1510915933:233164..233260 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1575043694:233164..233260 | TCONS_00010889-exon-sc0000118-1575043694:233164..233260 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1491911889:234670..235497 | TCONS_00010889-exon-sc0000118-1491911889:234670..235497 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1510915933:234670..235497 | TCONS_00010889-exon-sc0000118-1510915933:234670..235497 | Clytia hemisphaerica | exon |
| TCONS_00010889-exon-sc0000118-1575043694:234670..235497 | TCONS_00010889-exon-sc0000118-1575043694:234670..235497 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000118 | supercontig | sc0000118:220464..235497 + |
Blast
BLAST of TCONS_00010889 vs. Swiss-Prot (Human)
Match: LTMD1 (LETM1 domain-containing protein 1 OS=Homo sapiens GN=LETMD1 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 8.603e-31 Identity = 75/287 (26.13%), Postives = 146/287 (50.87%), Query Frame = 2
Query: 365 FQKVRYMVDIFWAGCKALFRDVRLALKTRRKLGLYHVRDYSRLTREELRHLRQTRQDVVKTFPVALLFMVPFIGYTAPILAYFYPRQLLSQQFWHPDQKKEF--VLEEYEKRS--------QYYLPLIKECGITAKEIVNKDLLNFCLKTIDGSYPENEELLHFENVFSQHEDFSLQKMPRYHLVKICKCWLIPTGWYLPRWYLINVLNKRILKLHEDDVLILRDGIDTLTPECIEQAVHVRGLDEASLNDESKKFWLKDWIELSSNVKGKDISFLAHSAVFKAANF 1195
F + + IF G + L+ D + A + + + ++++ + +L E+ HLRQ RQDV K + ++ + PF Y +L Y +PRQLL + FW P Q+ +F + + K+S + +PLI + G+ + L + C K G++P ++L FS H + ++ H+ + + L+ + YLP L + L +H+ D + + GI LT + ++ A ++RGL+ + ++ + WL +W+++S ++K ++S L H+ V + N+
Sbjct: 79 FPRFYVLYTIFMKGLQMLWADAKKARRIKTNMWKHNIK-FHQLPYREMEHLRQFRQDVTKCLFLGIISIPPFANYLVFLLMYLFPRQLLIRHFWTPKQQTDFLDIYHAFRKQSHPEIISYLEKVIPLISDAGLRWR------LTDLCTKIQRGTHPAIHDILALRECFSNHP-LGMNQLQALHVKALSRAMLLTS--YLPPPLLRHRLKTHTTVIHQLDKALAKLGIGQLTAQEVKSACYLRGLNSTHIGEDRCRTWLGEWLQISCSLKEAELSLLLHNVVLLSTNY 355
The following BLAST results are available for this feature:
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