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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010832 ID=TCONS_00010832|Name=TCONS_00010832|organism=Clytia hemisphaerica|type=transcript|length=2245bp
GCTTAAATAAAAATATGTAACAAAAACAGTTTGACTTTAATAACAACATT
TACACGGATCCCTTTTCTATGCATTCTTCATCGACCAATAGAAATGTTGA
TACCATCTGAACCAAAATATATTAAGGGTCAAAAGTATGAATCGAAGAGG
CGGTGAGACAGCTGCTTTCGATTTTAGAGATAATTCATCAGCGAGTGAAA
CATCTATTTTCTCGACAGTCTCTTGGTACCGATTGGAATATGCATTTGAA
AATGTAAGGGACTGTTTGAAACGATGTTGCTGTATGACACGAAAGCGTCA
CGAAAGCATGGAGTCCGACACAGAGGATGATAATGAGGACCGTGGCGGGA
ACGACCATGCAGACACGGAAGATACGAAACCGTTGTTCCCTAAAGCTACC
ATTTCTATTAACACGTTGAAAAGGAAGAACAAGAAATCGAAGAAGAAGGA
GTATAAAAGGAAGATTAGTTATTATGGGACTGTTCATCGTAATCTGGCAC
AGCAAACTGATCCCATCGTTGATGAATGAGTGAAAGATAAGCCAAGTCAA
CATCGTCCCCCAGTATATTCTAGGCTTTATTTAAGCTATTATTGGACGCC
GGAGAATATTATCTGGCACTAACAGGAAACATCGGAAAGCCCATAATACG
CATAGCAGTGATGCCCATGTGACTTGTAGACGAAGTTCTGCTATTTGACT
TtgttattcgataatattgaaagtcctCATCGTTGATGAACGAGTGAAAG
ATAACGAGGTCAATCTCGTCCCAGTATACTCTGGGCTTTATTTAAGGTGA
TGATGAGAATACCCATTTGGCACTATTGTGCATCATAAAGACGATAATAC
ACAAGGATGACCACGTGACTTGTAGAATTAATTACAGTTAAAGCTATCNC
ACTATTGTGCATCATAAAGACGATAATACACAAGGATGACCACGTGACTT
GTAGAATTAATTACAGTTAAAGCTCTCTAATCCGACATTTCTATgtgctc
cattattcgataattttgaaagtggtcGTCAACAAAAAACCCTCATAAAC
AACGGTCTACCATTCGATgcactcccttattcgatgcaAATCCAATtgcc
cttgaaaatcgaattagagagcattgACTGCACCTTTGTTTAGAATTCAA
AGATGGTCATGGTACTCATGATTTATGggaagagaaaaagaaatacTATC
TGATGATTAAAGTGAAAAACTACCTACGAATTGCAGGTCTCTTTGGGTGC
TTTCGTGTAAAACAGATCGTTACATTGGGCAATTCAAGACTGAGGAAGTG
ATCAAGGTAAACTGGACAATAAAAGTGGACAATTGACGTGCGAGTGAAAC
TGAAAGGTTTAAGTAGGAGGGGAGAGCGTTTCCATTCATTCAATATTACC
TATAAAACATACTTCGAGGTAAAAAAACATGATTTAACATGttgcaaaat
gaaaaattggaatATTGACTTTCTAGAGATTTTTCTGAATAATGAACAGT
CATAAAAGACTAAAAAAAAATATGAGAGTCAAGTATTTCGGAAGCTGTGA
ATGTTTTTTACTCAAGAATTTAGATATTATTACAACATCTTTagttcaaa
atcaattttcatttaaaagcgTTATATAAATACTTTACAAGAAATATTGT
TTGTATTTATTCTTCCCCACGGGAACCAGTCGGTTTTCGTGATACTTTTG
GCCCACGGGTTCCGGTTGGTTTTCGTGATCCTTTTGGTCCACGGGTACCA
GTTGGTTTTCGTGATCCTTTTGGTCCACGGGTACCAGTTGGTTTTCGGGA
GCCTCGTCTTGGGTCTTCTACTTCAGTAGGGCGTGGTCCACGAGTTCCAG
TTGGTTTTCGTGATCCTTTTGGTCCACGGGTTCCGGTTGGTTTTCCCGAT
CCTTTTGGTCCACGGGTACCAGTTGGTTTTCGTGATCCTTTTGGTCCACG
GGTACCAGTTGGTTTTCGTGAGCCTTGTCTTGGGTCTTCTACTTCAGTAG
GGCGTGGTCCAAGGGTTCCAGTTGGTTTTCGTGATCCTTTTGGTCCACGG
GTTCCGGTTGGTTTTCGTGATCCTTTTGGTCCACGGGTACCAGTTGGTTT
TCGTGATCTTTTTGGTCCACGGGTACCAGTTGGTTTTCGTGATCCTCGTC
TTGGGTCTTCTACTTCAGTAGGGCGTGGTCCACGGGTTCCAGTTGGTTTT
CGTGATCCTTTTGGTCCACGGGTTCCAGTTGGTTTTCGTGATCCN Run BLAST on NCBI transcript from alignment at sc0000117:430683..433645- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010832 ID=TCONS_00010832|Name=TCONS_00010832|organism=Clytia hemisphaerica|type=transcript|length=2963bp|location=Sequence derived from alignment at sc0000117:430683..433645- (Clytia hemisphaerica)
GCTTAAATAAAAATATGTAACAAAAACAGTTTGACTTTAATAACAACATT
TACACGGATCCCTTTTCTATGCATTCTTCATCGACCAATAGAAATGTTGA
TACCATCTGAACCAAAATATATTAAGGGTCAAAAGTATGAATCGAAGAGG
CGGTGAGACAGCTGCTTTCGATTTTAGAGATAATTCATCAGCGAGTGAAA
CATCTATTTTCTCGACAGTCTCTTGGTACCGATTGGAATATGCATTTGAA
AATGTAAGGGTGAGTAGAATGAAAAATATTTTTCTTAAACAAGGAAGCTC
CCTCAGTTAGAGAAATCTCTGTCCCCTAGTATACTATCAGTAGGAACCAC
TTTAAGTTTCAAGCCCTACTTTTTCAAGCTTCAAGCTTCTTTTTTCATGC
AGATTTACAGCTGAAAAATATAGTGCACTATAAGGATTGGGTCAATCAAG
AGAAAATGCACTGAAAGGGTACCTTTTCAGCCATATTGAACTGCACTGTA
AGGGTACGATTTTGAAAAGCAGATTTTGCGCGGCACATACCGTCGTTTCG
AAATCAAGTGGCCCCCCGAATCCTATCGTCTACACATTATCACTAAAAAA
TAATTCAGGAGGCGGGATAAATTTGAAAACGGAGTGGCGGAAGTGTTTAC
AGTGTTCCAAATTCTACCATCACCTTTTTCCTGTAAACCGCCCTGACGCC
CTGACTCTGCGCATATATATTTTCCCACGTTTATTGTGACCCGCCAATCC
CTGAAAACGAAGGCCTCTCACTCCAAAATTCTTGACGCGGTCTTGCAAAA
TTCCGTAATCTAAACCTTTATCCAAATGTTGAATTTTTCCGACATTCAAA
GCTTTAGCGTGTTGGATGAAAACTTCTGCATCTGGGGCCAAAAAACTGAT
AAATCAGAACATCAAACAACCGACTGAAGGCCGTTAAACAGTCATATTCT
TTTCATTTTCGTCCCTTTTTGTAATAGGACTGTTTGAAACGATGTTGCTG
TATGACACGAAAGCGTCACGAAAGCATGGAGTCCGACACAGAGGATGATA
ATGAGGACCGTGGCGGGAACGACCATGCAGACACGGAAGATACGAAACCG
TTGTTCCCTAAAGCTACCATTTCTATTAACACGTTGAAAAGGAAGAACAA
GAAATCGAAGAAGAAGGAGTATAAAAGGAAGATTAGTTATTATGGGACTG
TTCATCGTAATCTGGCACAGCAAACTGATCCCATCGTTGATGAATGAGTG
AAAGATAAGCCAAGTCAACATCGTCCCCCAGTATATTCTAGGCTTTATTT
AAGCTATTATTGGACGCCGGAGAATATTATCTGGCACTAACAGGAAACAT
CGGAAAGCCCATAATACGCATAGCAGTGATGCCCATGTGACTTGTAGACG
AAGTTCTGCTATTTGACTTTGTTATTCGATAATATTGAAAGTCCTCATCG
TTGATGAACGAGTGAAAGATAACGAGGTCAATCTCGTCCCAGTATACTCT
GGGCTTTATTTAAGGTGATGATGAGAATACCCATTTGGCACTATTGTGCA
TCATAAAGACGATAATACACAAGGATGACCACGTGACTTGTAGAATTAAT
TACAGTTAAAGCTATCNCACTATTGTGCATCATAAAGACGATAATACACA
AGGATGACCACGTGACTTGTAGAATTAATTACAGTTAAAGCTCTCTAATC
CGACATTTCTATGTGCTCCATTATTCGATAATTTTGAAAGTGGTCGTCAA
CAAAAAACCCTCATAAACAACGGTCTACCATTCGATGCACTCCCTTATTC
GATGCAAATCCAATTGCCCTTGAAAATCGAATTAGAGAGCATTGACTGCA
CCTTTGTTTAGAATTCAAAGATGGTCATGGTACTCATGATTTATGGGAAG
AGAAAAAGAAATACTATCTGATGATTAAAGTGAAAAACTACCTACGAATT
GCAGGTCTCTTTGGGTGCTTTCGTGTAAAACAGATCGTTACATTGGGCAA
TTCAAGACTGAGGAAGTGATCAAGGTAAACTGGACAATAAAAGTGGACAA
TTGACGTGCGAGTGAAACTGAAAGGTTTAAGTAGGAGGGGAGAGCGTTTC
CATTCATTCAATATTACCTATAAAACATACTTCGAGGTAAAAAAACATGA
TTTAACATGTTGCAAAATGAAAAATTGGAATATTGACTTTCTAGAGATTT
TTCTGAATAATGAACAGTCATAAAAGACTAAAAAAAAATATGAGAGTCAA
GTATTTCGGAAGCTGTGAATGTTTTTTACTCAAGAATTTAGATATTATTA
CAACATCTTTAGTTCAAAATCAATTTTCATTTAAAAGCGTTATATAAATA
CTTTACAAGAAATATTGTTTGTATTTATTCTTCCCCACGGGAACCAGTCG
GTTTTCGTGATACTTTTGGCCCACGGGTTCCGGTTGGTTTTCGTGATCCT
TTTGGTCCACGGGTACCAGTTGGTTTTCGTGATCCTTTTGGTCCACGGGT
ACCAGTTGGTTTTCGGGAGCCTCGTCTTGGGTCTTCTACTTCAGTAGGGC
GTGGTCCACGAGTTCCAGTTGGTTTTCGTGATCCTTTTGGTCCACGGGTT
CCGGTTGGTTTTCCCGATCCTTTTGGTCCACGGGTACCAGTTGGTTTTCG
TGATCCTTTTGGTCCACGGGTACCAGTTGGTTTTCGTGAGCCTTGTCTTG
GGTCTTCTACTTCAGTAGGGCGTGGTCCAAGGGTTCCAGTTGGTTTTCGT
GATCCTTTTGGTCCACGGGTTCCGGTTGGTTTTCGTGATCCTTTTGGTCC
ACGGGTACCAGTTGGTTTTCGTGATCTTTTTGGTCCACGGGTACCAGTTG
GTTTTCGTGATCCTCGTCTTGGGTCTTCTACTTCAGTAGGGCGTGGTCCA
CGGGTTCCAGTTGGTTTTCGTGATCCTTTTGGTCCACGGGTTCCAGTTGG
TTTTCGTGATCCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010832-exon-sc0000117-1575043694:433387..433645 | TCONS_00010832-exon-sc0000117-1575043694:433387..433645 | Clytia hemisphaerica | exon |
| TCONS_00010832-exon-sc0000117-1575043694:430683..432668 | TCONS_00010832-exon-sc0000117-1575043694:430683..432668 | Clytia hemisphaerica | exon |
| TCONS_00010832-exon-sc0000117-1510915933:433387..433645 | TCONS_00010832-exon-sc0000117-1510915933:433387..433645 | Clytia hemisphaerica | exon |
| TCONS_00010832-exon-sc0000117-1510915933:430683..432668 | TCONS_00010832-exon-sc0000117-1510915933:430683..432668 | Clytia hemisphaerica | exon |
| TCONS_00010832-exon-sc0000117-1491911889:433387..433645 | TCONS_00010832-exon-sc0000117-1491911889:433387..433645 | Clytia hemisphaerica | exon |
| TCONS_00010832-exon-sc0000117-1491911889:430683..432668 | TCONS_00010832-exon-sc0000117-1491911889:430683..432668 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117 | supercontig | sc0000117:430683..433645 - |
Blast
The following BLAST results are available for this feature:
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