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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010807 ID=TCONS_00010807|Name=TCONS_00010807|organism=Clytia hemisphaerica|type=transcript|length=1015bp
ATGACAACATCCAAACGAcgaatgaaatttcaaaatgggcACAAGTTGAC
AAGACCTCATCTCcaacaaaaacttcaaacattaAAGATACTGACgcaaa
tgaaaatttgaaaacctctccaacaaaaaataccaaaaatactGATGACA
ATTCAAAACGTACACAAGTTGACGAGACCTCATCTCTAACCaaaactcca
aacaaaaaagataatggctcaaacaaaaacttgaagATCTCTCCAACAGA
CAATCTCAAAAAGACTGATGAGAATTCAAAATGGACACAAGTTGACGAGA
CCTCATCTCCAACAAAAAGCATTGACGCTTCGACTGAAACTCCAGAAGAA
TCTTTCTCGTCTTCTAATACTGAGGGTGGTTTCATCGACTTATCTGATTT
ACTATGGGAATCATtaaaattctttgaagagaattATGAAAGTACAACTG
AACAACCTAATGAGCTAAGTTCCACGCAAATGCCAACCACTgaagatttt
gaagatttctatACTTATTCTAGGGGCACTAAGAAAGCTACTACAGATTC
GATACCGTTTGAGACAATACCAACAATTTTTGTAGATTCTCACTCTTCAA
CTAAGAATTCTAACGTCAAAACTAATCCAACTATTTTAACAGAAACCACT
GACTTTACAGAGATTAAGACAACTTCAACTTCCAAAGATAAGACTCCATA
TTCAGTAAAACCTGAAACAACCGGAAATAATATTGaaattgattctaaaa
atcCTACTGATACAATCACCGGAACGCCAGATCCAATGAAAACAAGAGAA
CATATAACAGGAAAAACACTTACAGGTTCCTCAAACAACCTATTGTTTGG
TATTTCAACGGCAACTTTGTCACAATCACCAACTGAAACTCCAGAAGAAT
CTTTCTCATCTTCTAACACTAAAAATCACTTCATCGACTTATCCGATTTA
TTATGGGAATCATTAAAATTCTACGAGGAGAATTATGGAAGTACAACTGA
ACTACCTAATGAGTT Run BLAST on NCBI transcript from alignment at sc0000117:557273..558656+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010807 ID=TCONS_00010807|Name=TCONS_00010807|organism=Clytia hemisphaerica|type=transcript|length=1384bp|location=Sequence derived from alignment at sc0000117:557273..558656+ (Clytia hemisphaerica)
ATGACAACATCCAAACGACgaatgacatttcaaaatggACACAAGTTGAC
AAGACCTCATCTCTCACCAAAACTCCAAACATTAAAGATACTGActcaaa
caaaaacttgaaaatttctccaacaGACAATCTCAAAAAGACAAACGACA
TTTCAAAATGGACACAAGTTGACAAGACCTCATCTCTTACAGAAACTTCA
AACAGAAAAGATATTAACTCAACCAACAACTTGGATATTTCTCCAACTGA
AAGCATCAAAGTTACTGATGATATTTCAAAATGGGTACCAATTGCAAAAA
CCTCATCTCCAACCAAAACTTTAAATAACAAAGATATTGACTTGCCCAAC
AGCTTGGAGATTTCTTCAACAGACGACATCCAAACGAcgaatgaaatttc
aaaatgggcACAAGTTGACAAGACCTCATCTCcaacaaaaacttcaaaca
ttaAAGATACTGACgcaaatgaaaatttgaaaacctctccaacaaaaaat
accaaaaatactGATGACAATTCAAAACGTACACAAGTTGACGAGACCTC
ATCTCTAACCaaaactccaaacaaaaaagataatggctcaaacaaaaact
tgaagATCTCTCCAACAGACAATCTCAAAAAGACTGATGAGAATTCAAAA
TGGACACAAGTTGACGAGACCTCATCTCCAACAAAAAGCATTGACGCTTC
GACTGAAACTCCAGAAGAATCTTTCTCGTCTTCTAATACTGAGGGTGGTT
TCATCGACTTATCTGATTTACTATGGGAATCATtaaaattctttgaagag
aattATGAAAGTACAACTGAACAACCTAATGAGCTAAGTTCCACGCAAAT
GCCAACCACTgaagattttgaagatttctatACTTATTCTAGGGGCACTA
AGAAAGCTACTACAGATTCGATACCGTTTGAGACAATACCAACAATTTTT
GTAGATTCTCACTCTTCAACTAAGAATTCTAACGTCAAAACTAATCCAAC
TATTTTAACAGAAACCACTGACTTTACAGAGATTAAGACAACTTCAACTT
CCAAAGATAAGACTCCATATTCAGTAAAACCTGAAACAACCGGAAATAAT
ATTGaaattgattctaaaaatcCTACTGATACAATCACCGGAACGCCAGA
TCCAATGAAAACAAGAGAACATATAACAGGAAAAACACTTACAGGTTCCT
CAAACAACCTATTGTTTGGTATTTCAACGGCAACTTTGTCACAATCACCA
ACTGAAACTCCAGAAGAATCTTTCTCATCTTCTAACACTAAAAATCACTT
CATCGACTTATCCGATTTATTATGGGAATCATTAAAATTCTACGAGGAGA
ATTATGGAAGTACAACTGAACTACCTAATGAGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010807-exon-sc0000117-1491911889:557273..557280 | TCONS_00010807-exon-sc0000117-1491911889:557273..557280 | Clytia hemisphaerica | exon |
| TCONS_00010807-exon-sc0000117-1510915933:557273..557280 | TCONS_00010807-exon-sc0000117-1510915933:557273..557280 | Clytia hemisphaerica | exon |
| TCONS_00010807-exon-sc0000117-1575043694:557273..557280 | TCONS_00010807-exon-sc0000117-1575043694:557273..557280 | Clytia hemisphaerica | exon |
| TCONS_00010807-exon-sc0000117-1491911889:557650..558656 | TCONS_00010807-exon-sc0000117-1491911889:557650..558656 | Clytia hemisphaerica | exon |
| TCONS_00010807-exon-sc0000117-1510915933:557650..558656 | TCONS_00010807-exon-sc0000117-1510915933:557650..558656 | Clytia hemisphaerica | exon |
| TCONS_00010807-exon-sc0000117-1575043694:557650..558656 | TCONS_00010807-exon-sc0000117-1575043694:557650..558656 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117 | supercontig | sc0000117:557273..558656 + |
Blast
The following BLAST results are available for this feature:
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