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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010805 ID=TCONS_00010805|Name=TCONS_00010805|organism=Clytia hemisphaerica|type=transcript|length=238bp
TCTAAGTTTCTAAGTTTGCTATTAGAAATGAATCTTCTAACTTTTGCATT
ACTTTGTGCTGTTGCTTGCTTAGCCCTTGCAgaTGGAGGAGGAGCTGAAC
GCAAGTGTGAAGCAGCATCAGAGAAATGCATCCAACTTGCCAAAAAGACG
AACAACAAAACAGCTCTGGTCAAATGTGTCGATACCAGAAACAAGTGTGt
caaagattcttttgataAGAAACTCTCTTGTCTGGGAA Run BLAST on NCBI transcript from alignment at sc0000117:513805..515121+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010805 ID=TCONS_00010805|Name=TCONS_00010805|organism=Clytia hemisphaerica|type=transcript|length=1317bp|location=Sequence derived from alignment at sc0000117:513805..515121+ (Clytia hemisphaerica)
TCTAAGTTTCTAAGTTTGCTATTAGAAATGAATCTTCTAACTTTTGCATT
ACTTTGTGCTGTTGCTTGCTTAGCCCTTGCAggtaaaaacattattttcc
aATGATTTTAGTGGCTTCGAAATTTAACCAGATTTTAGTTACATTACAAT
TAAATTTCTAAATCTGATTCTATTTTGCTTTTCTGCttgattttcacatt
ttttcactttctttcagaTGGAGGAGGAGCTGAACGCAAGGtatgtttta
taaaaaataattttcattcattggtGACCTCATTATAGATTATCTAATCT
GCCTGCTCTACTTTTTTAGAAGTTTAGagcccggggggtactacccttgc
cgaccgacggggggtgctccgctgaggttcgaaaaatggaaccTTCcttg
ggactcgttttttcaaaaattttgccgaaatttgcgagaaaagtgaccct
gaatgggactaaaattccaaacttttctactttttcccaaatttccgaaa
aaggcaccctacgagggactgatttttctattttggtgtttttgcgaccc
tacctagGACTCGAAGAGGTTAAAAAGGGTACCCTAACCAGCGGCGGATC
CAGGGTTTAGAGGGATCTGAAAAACTTGTTCATCCATGtcttttcggttg
cgtgaatgcgtgaaaatagagaaaaaaagaCCGTGAATGCGTGTTTTTGT
AAGAGTAGCCAAGATTGCAAAGGgtagaaattgcaaaaaaaatacaactt
tgaaaatgtctggaattgctgaatttcaagAAATCCGAAGTAATTTACAG
CTTAAAGTATAACTCGAAACTGATCTAGAATGTTAGAATGAGAACAAGAT
TGAGAGTATACCCACAAAAGACAGACCAACCTCAGCTCTGGCATAACCAA
GATTTCATAACACCAAAGTGGCTTGATTTGAAACTCTTGGAAGGGAAATT
AACCCACTTTTTTCCCCATTTAAATGGCCTGATcggcgtggttttcacac
aaactcaagattgaaagtaaaactcGTCGtcagatttcaaaagaaaaatc
aatccGTCATTTTAATGGCGCAAATCTTAAGGTTTCACTATTTCCTGCTT
GAGAAGGGATGAAGATTTCTTTCTAGTCCCTTCGAGCCCAATATCACGAA
AATATTCCATATCATTCAATCTATTTTCTGTCAGTGTGAAGCAGCATCAG
AGAAATGCATCCAACTTGCCAAAAAGACGAACAACAAAACAGCTCTGGTC
AAATGTGTCGATACCAGAAACAAGTGTGtcaaagattcttttgataAGAA
ACTCTCTTGTCTGGGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010805-exon-sc0000117-1491911889:513805..513886 | TCONS_00010805-exon-sc0000117-1491911889:513805..513886 | Clytia hemisphaerica | exon |
| TCONS_00010805-exon-sc0000117-1510915933:513805..513886 | TCONS_00010805-exon-sc0000117-1510915933:513805..513886 | Clytia hemisphaerica | exon |
| TCONS_00010805-exon-sc0000117-1575043694:513805..513886 | TCONS_00010805-exon-sc0000117-1575043694:513805..513886 | Clytia hemisphaerica | exon |
| TCONS_00010805-exon-sc0000117-1491911889:514022..514044 | TCONS_00010805-exon-sc0000117-1491911889:514022..514044 | Clytia hemisphaerica | exon |
| TCONS_00010805-exon-sc0000117-1510915933:514022..514044 | TCONS_00010805-exon-sc0000117-1510915933:514022..514044 | Clytia hemisphaerica | exon |
| TCONS_00010805-exon-sc0000117-1575043694:514022..514044 | TCONS_00010805-exon-sc0000117-1575043694:514022..514044 | Clytia hemisphaerica | exon |
| TCONS_00010805-exon-sc0000117-1491911889:514989..515121 | TCONS_00010805-exon-sc0000117-1491911889:514989..515121 | Clytia hemisphaerica | exon |
| TCONS_00010805-exon-sc0000117-1510915933:514989..515121 | TCONS_00010805-exon-sc0000117-1510915933:514989..515121 | Clytia hemisphaerica | exon |
| TCONS_00010805-exon-sc0000117-1575043694:514989..515121 | TCONS_00010805-exon-sc0000117-1575043694:514989..515121 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117 | supercontig | sc0000117:513805..515121 + |
Blast
The following BLAST results are available for this feature:
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