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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010802 ID=TCONS_00010802|Name=TCONS_00010802|organism=Clytia hemisphaerica|type=transcript|length=514bp
CTTAAAACATATGGCTTTATCATTGGATACTTCAGTGTAAAGCAGAAGGA
ATAATGAGGCAATTAACAATCATTGCGCTTTTAATTATTGGAGGCTTAGC
ACTGACTAATGCCGAGGAGGTTACAAAGAGACCAAGGGGAACAGGTGAGC
CGAAAGGTACACGCTTTCCATTGAAAACCGGAAGACCAACAGGAACCCGT
GCACCAAGAGGATCAGGGAAACCAACTGGAACCCGTGGACCACGCCCTAC
TGAAGTAGAAGACCCAAGTCGAGGCACATGGAAACCAATTGGTACCCGTG
ggcaaaaaaaaacacgaaaaccGAAAGGAACCCGTGGACCACGCCCTACT
GAAGTAGAAGACCCAAGCCGAGGATCACAAAAACCAACTGGTACCCGTGG
ACCAAAAGGATCACGAAAACCAACTGGAACCCGTGGACCAAAAGGATCAG
AGAAACCAACTGGAACCCGTGGACCACGCCCTACTGAAGTAGAAGACCCA
AGACGAGGATCACN Run BLAST on NCBI transcript from alignment at sc0000117:429382..430411+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010802 ID=TCONS_00010802|Name=TCONS_00010802|organism=Clytia hemisphaerica|type=transcript|length=1030bp|location=Sequence derived from alignment at sc0000117:429382..430411+ (Clytia hemisphaerica)
CTTAAAACATATGGCTTTATCATTGGATACTTCAGTGTAAAGCAGAAGGA
ATAATGAGGCAATTAACAATCATTGCGCTTTTAATTATTGGAGGCTTAGC
ACTGACTAATGCCGAGGAGGTGAGTTAATTCATGAAACCTTAGAATTTGA
TATATATTGAAtattacacgttgttttttaatataaacatccaaaatttt
tgaagtattttgaagtattaacattttgaatttcaagtctaaaattgttc
ttaacgcgcgttcttattttcaccattttgtgagtgtttttaTCAATCTT
CCTAAGAAATTACGTGTTTTAGAGGCCACGAAGCATtaaatgctcttaac
ttgttctcaatattttttaagtcttgtgttcttatatagttagtttttat
aaaaaacgtgtacacgaACTTTCATGAAAGAATCTCTTAAATTAAACTCT
TAAGTTTTTAGTCTCCAACTCGGTAAATAAAccatacccagctggcacac
aacgtcgtttcaacgttcatctaatgttcacaacgtccatataacgttag
atgaccgttgtaacaacgttgtgtgccagctgggataggGTTTTATACAA
ATCCTGACGTATGAACCAAAATTTTTTGTCCGTAGGTTACAAAGAGACCA
AGGGGAACAGGTGAGCCGAAAGGTACACGCTTTCCATTGAAAACCGGAAG
ACCAACAGGAACCCGTGCACCAAGAGGATCAGGGAAACCAACTGGAACCC
GTGGACCACGCCCTACTGAAGTAGAAGACCCAAGTCGAGGCACATGGAAA
CCAATTGGTACCCGTGggcaaaaaaaaacacgaaaaccGAAAGGAACCCG
TGGACCACGCCCTACTGAAGTAGAAGACCCAAGCCGAGGATCACAAAAAC
CAACTGGTACCCGTGGACCAAAAGGATCACGAAAACCAACTGGAACCCGT
GGACCAAAAGGATCAGAGAAACCAACTGGAACCCGTGGACCACGCCCTAC
TGAAGTAGAAGACCCAAGACGAGGATCACN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010802-exon-sc0000117-1491911889:429382..429500 | TCONS_00010802-exon-sc0000117-1491911889:429382..429500 | Clytia hemisphaerica | exon |
| TCONS_00010802-exon-sc0000117-1510915933:429382..429500 | TCONS_00010802-exon-sc0000117-1510915933:429382..429500 | Clytia hemisphaerica | exon |
| TCONS_00010802-exon-sc0000117-1575043694:429382..429500 | TCONS_00010802-exon-sc0000117-1575043694:429382..429500 | Clytia hemisphaerica | exon |
| TCONS_00010802-exon-sc0000117-1491911889:430017..430411 | TCONS_00010802-exon-sc0000117-1491911889:430017..430411 | Clytia hemisphaerica | exon |
| TCONS_00010802-exon-sc0000117-1510915933:430017..430411 | TCONS_00010802-exon-sc0000117-1510915933:430017..430411 | Clytia hemisphaerica | exon |
| TCONS_00010802-exon-sc0000117-1575043694:430017..430411 | TCONS_00010802-exon-sc0000117-1575043694:430017..430411 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117 | supercontig | sc0000117:429382..430411 + |
Blast
The following BLAST results are available for this feature:
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