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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010781 ID=TCONS_00010781|Name=TCONS_00010781|organism=Clytia hemisphaerica|type=transcript|length=2148bp
NATCAAATAACTAATAATGTCATTCAACTTTGGAACACCAAGTACATCGG
CATCCACAGGTGGTGGATTCAGTTTTGGTAGCACAGCCAAGCCTGCAGCA
TCAACAACTGGATTTTCTTTTGGTGGTGCTACAACTTCATCATCGGCTGC
CCCAGCTGCAGGTGGTTTTTCGTTTGGTGCGAAGCCTGCTGCAAGTGTTG
CACCAGTTGCTGGTGGAGGGCTTTCATTTGGAGCAAAACCTGCAGCAACA
GCTGCCCCTGGTGGGTTTTCATTTGGTTCTACTCCAGCATCGACTGCAAC
CGCAGCTCCAACAGCAGGTGGTTTTTCGTTTGGCGCAAAACCAACAGCCA
CTGCTACAACAACTCCATCATCAGGATTTTCATTTGGTGGTGGAGCAACC
AGCACTGCAACAACATCAGCAGCAGCACCAAGCTCAGGCTTTTCATTTGG
GTCATCAGCTGCAGCCGCTACAACTACCACAGCCTCAAGTTTTTCTTTTG
GAGGAGCACCAGTAGCGAAGAGTGCTCCTGCCCCAGCGTTTGGAACACCA
GCGAGCTCAGCAGCAACGTCAGCTGCTAAACCAACAGGATTCAGTTTCGG
CACTCCAGCTGCTTCTTCATCAACGACGACCACAACAGCATCAGGTTTCT
CACTCTCAACAACTGCTACTTCGGCTGCTGCAAGCACGGGTGGTTTCAAA
TTAGGAGGTGCCGCAACTACAAGTGCTACTACTCTGGGTGCAGGATTGAA
ACTTGGAGCAAGCACTGCTACCACTTCTGGATCTGCAACGGCAACAGCTT
CAGCTCTGTCAACCTCTACATTGAAACAAGTTTCTTATAAGtCACTTGAA
GAGACAGTTGACAAATGGCTTCACGATTTGAATGAACAAGAGAAgatatt
tttaaatcaagctgcACAAGTCAATATGTGGGACAGACAACTGATCGAGA
ATGGAGAGAAAATCAGCGAAACACACAATGAAGTTGAAAGAGTGAAAGCA
GAACAATCGCGTTTAGATCGTGAGCTCGATTTCATTTTGTCTCAACAAGA
AGAACTCGAGGAACTACTGAATCCCATTGAAGCACAACTGAACTCACAAC
AGATGATTTCTTACGCGCAACACGCTGATATTGAACGTGAACGCACTTAT
GGGCTTGCAGAAAACATCGACAGCCAGCTGAAACAAATGATGCAGAGCTT
GAACGAGATCATCGATCATGTCAACACTTCCAACACGActcctaaaaatc
aaaaagatgaCACCATGGTgcagatttcaaaaattctcaACGCTCACATG
GACTCCTTACAATGGATTGACCAGAATACTAATAAACTAAAACAAAGAGT
GAAAGAAGTTTCCCAAACTATGGACACACAACGTAGAGAACAANATTCTA
AACGCTCACATGGACTCCTTACAATGGATTGACCAGAATACTAATAAACT
AAAACAAAGAGTGAAAGAAGTTTCCCAAACTATGGACACACAACGTAGAG
AACAAGAGAGATCTTTCAATTATAATTATGAGTGATGGCTCACTTAAACT
GAGTTGCATATTCAGTGACTTCATGGGTGTCACAACTCAAAATATTCAga
atcaaataattttttaatcgaCTTTCATGAGAAATTACAAATCTATTGAT
ATCATTACTGCTGCTATGGTTGAATATTGTCGTCAGCTAACTAAATTCAT
TGCATTAAATTGTATAAGGTTTAATCCAATCCTCCTGTGGCATATAGTCT
ATTGTTTATCAGTttcaatatttaatttttcatggTTTTATGGTATACAA
ACTGAGATGGAATTATGTGTTTGTTCAAGAATcatcaatttaaaaaatga
tcagAAGACTCGTGTGAATAATGATGTCGAGATTTCCTACAATTCTGACA
GTAAATCTGTACACGATTGTAATGTAAATTTGATAACGTTTATACAGTTT
TATTTTGCAAATAAATGTTGGTAATTTTGTATCTTGCTTCTTATTTAGCA
TAGAATGCTCtatctttttaccattttgaacATTTGAATGAAGTGAGTTG
CAGAAAgatgtttcagaaaaaaattcttcaaatggAGATGATTTGCCCAT
ATGTGTTAAAGACCGCAAAAGAAATCTTGAGATGATCTAAATAGCTTT Run BLAST on NCBI protein sequence of TCONS_00010781-protein >TCONS_00010781-protein ID=TCONS_00010781-protein|Name=TCONS_00010781-protein|organism=Clytia hemisphaerica|type=polypeptide|length=471bp
MSFNFGTPSTSASTGGGFSFGSTAKPAASTTGFSFGGATTSSSAAPAAGG
FSFGAKPAASVAPVAGGGLSFGAKPAATAAPGGFSFGSTPASTATAAPTA
GGFSFGAKPTATATTTPSSGFSFGGGATSTATTSAAAPSSGFSFGSSAAA
ATTTTASSFSFGGAPVAKSAPAPAFGTPASSAATSAAKPTGFSFGTPAAS
SSTTTTTASGFSLSTTATSAAASTGGFKLGGAATTSATTLGAGLKLGAST
ATTSGSATATASALSTSTLKQVSYKSLEETVDKWLHDLNEQEKIFLNQAA
QVNMWDRQLIENGEKISETHNEVERVKAEQSRLDRELDFILSQQEELEEL
LNPIEAQLNSQQMISYAQHADIERERTYGLAENIDSQLKQMMQSLNEIID
HVNTSNTTPKNQKDDTMVQISKILNAHMDSLQWIDQNTNKLKQRVKEVSQ
TMDTQRREQXSKRSHGLLTMD Run BLAST on NCBI transcript from alignment at sc0000117:93040..96828+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010781 ID=TCONS_00010781|Name=TCONS_00010781|organism=Clytia hemisphaerica|type=transcript|length=3789bp|location=Sequence derived from alignment at sc0000117:93040..96828+ (Clytia hemisphaerica)
NATCAAATAACTAATAATGTCATTCAACTTTGGAACACCAAGTACATCGG
CATCCACAGGTGGTGGATTCAGTTTTGGTAGCACAGCCAAGCCTGCAGCA
TCAACAACTGGATTTTCTTTTGGTGGTGCTACAACTTCATCATCGGCTGC
CCCAGCTGCAGGTGGTTTTTCGTTTGGTGCGAAGCCTGCTGCAAGTGTTG
CACCAGTTGCTGGTGGAGGGCTTTCATTTGGAGCAAAACCTGCAGCAACA
GCTGCCCCTGGTGGGTTTTCATTTGGTTCTACTCCAGCATCGACTGCAAC
CGCAGCTCCAACAGCAGGTGGTTTTTCGTTTGGCGCAAAACCAACAGCCA
CTGCTACAACAACTCCATCATCAGGATTTTCATTTGGTGGTGGAGCAACC
AGCACTGCAACAACATCAGCAGCAGCACCAAGCTCAGGCTTTTCATTTGG
GTCATCAGCTGCAGCCGCTACAACTACCACAGCCTCAAGTTTTTCTTTTG
GAGGAGCACCAGTAGCGAAGAGTGCTCCTGCCCCAGCGTTTGGAACACCA
GCGAGCTCAGCAGCAACGTCAGCTGCTAAACCAACAGGATTCAGTTTCGG
CACTCCAGCTGCTTCTTCATCAACGACGACCACAACAGCATCAGGTTTCT
CACTCTCAACAACTGCTACTTCGGCTGCTGCAAGCACGGGTGGTTTCAAA
TTAGGAGGTGCCGCAACTACAAGTGCTACTACTCTGGGTGCAGGATTGAA
ACTTGGAGCAAGCACTGCTACCACTTCTGGATCTGCAACGGCAACAGCTT
CAGCTCTGTCAACCTCTACATTGAAACAAGTTTCTTATAAGGTAAGTCTG
TCTCTCGAATGGTTTAGCTTCTCGCAACCCAAGTCTGTTTTCTATTCTTA
TTGATAGATACTGACAGGGAAGGTTTTGGTATAATNACAACCCAAGTCTT
TTTTCTATTCTTATTGATAGATACTGACAGGGAAGGTTTTGGtataatat
aaaatatcaaattgtttagaaaaattataaatgcctcataaacaaatgaa
aaattttattcATGTGATAATATCATCGATCATAGTGTCCTGTAAAGGGG
GCttaagaaaattcgaaaaaagttGGAAAAAGTTGTTTTCAAAGATCCAG
GAGGGTGGAGGTAGAGAAAAATTGcttcaaaaatccagggtgggGAGAAA
AGATTGTTTCAAAAAGCCAGGGGACTGAAGAGTCtagaattttcttttct
tttgtaacACAAAAAAGGTAGCATTCCAAATCATTAATTATtaacttttt
attctttacaccaaaaatttgttaatttcattctttggaagtttttttta
aattttttcattgtatttaaGAAGATAATGTCAATAGAAGCGACGAGTAC
AAACTTGCAGGAGGGAATTCTTTTGAGATATTAAGGGGCAACTAAAAGGA
GGGGCAGAGgagtttttttttccattttcaaagGCAATCAACCTACCAAT
ACACTATCATAACTggaatgaatttatttttacattagattactttaagt
tttgaatttatgatttttttaaaaattctagtCACTTGAAGAGACAGTTG
ACAAATGGCTTCACGATTTGAATGAACAAGAGAAgatatttttaaatcaa
gctgcACAAGTCAATATGTGGGACAGACAACTGATCGAGAATGGAGAGAA
AATCAGCGAAACACACAATGAAGTAAAAGcaaatttctctttttctctaG
ACTCTACTCTAATTTTGATCTAAAATACCACAAAGATATTAGTCAAGTTT
AACAGACGACAGTTTAACATCAAAATTATTTGTCTATTAAAAAATCAATG
CAGTGGTACATCAGGCATTGGCAACAATGTTACGGCAAAATTCTGTGTCC
TTTTCAGAGACAATGACTTCAGACAATTGACTTCAATACTTCCTTGTAAA
TTCCAACCCAGTCTCGATAGCTATGGAGCACTCATATCCATATCCTAGAA
TTTTTATACCAATTCAAAAGCTTTCATAAGAGATTATCTTTTTCTGTCAA
AtcattttaatatttatttgttaataagaaaaaattcaaatggaATGGTG
TATCCTCAACtattttcttgacaaaaaatTCTATCATAATTaagaatttc
tttattttaaggTGTTCATTTCagtttaaataaaaagattcTTTATTTAA
GCTAACTTTTGGTAAAAATGTTCTTCAGGTTGAAAGAGTGAAAGCAGAAC
AATCGCGTTTAGATCGTGAGCTCGATTTCATTTTGTCTCAACAAGAAGAA
CTCGAGGAACTACTGAATCCCATTGAAGCACAACTGAACTCACAACAGAT
GATTTCTTACGCGCAACACGCTGATATTGAACGTGAACGCACTTATGGGC
TTGCAGAAAACATCGACAGCCAGCTGAAACAAATGATGCAGGTATGtgat
tagttttaaagagatttATGTGACATAAATTTTCTGTTgttgttaaaatc
tttttcttgatAAAGATGGTAGGTAGGTTATTCTAGCAACATTTTACTAT
AATGCCCATTCTTCAAAACTATCATTAAGCATTTTTCACTTAATTTAAAC
TAACGTATTCGTCAACTAAAGCGTTAGGAGACTGTTTTTAGGTTTACCAG
GAAGGGGTGCCATCAAAGTGTCTGAAGTGTTTGTATTGCCATTCTCATAG
ACAAAGAATATTGACGTCATCTACTTGTAAATTTGTTTCCAGTCTCCTCA
AAGCTGAGCACACTCGTAGCGTATAGATAGGTGTATTATCCAAGCATCAT
TTCTGTTCATATTGATTATTCCTTTTTAAAACACAGAGCTTGAACGAGAT
CATCGATCATGTCAACACTTCCAACACGActcctaaaaatcaaaaagatg
aCACCATGGTgcagatttcaaaaattctcaACGCTCACATGGACTCCTTA
CAATGGATTGACCAGAATACTAATAAACTAAAACAAAGAGTGAAAGAAGT
TTCCCAAACTATGGACACACAACGTAGAGAACAANATTCTAAACGCTCAC
ATGGACTCCTTACAATGGATTGACCAGAATACTAATAAACTAAAACAAAG
AGTGAAAGAAGTTTCCCAAACTATGGACACACAACGTAGAGAACAAGAGA
GATCTTTCAATTATAATTATGAGTGATGGCTCACTTAAACTGAGTTGCAT
ATTCAGTGACTTCATGGGTGTCACAACTCAAAATATTCAgaatcaaataa
ttttttaatcgaCTTTCATGAGAAATTACAAATCTATTGATATCATTACT
GCTGCTATGGTTGAATATTGTCGTCAGCTAACTAAATTCATTGCATTAAA
TTGTATAAGGTTTAATCCAATCCTCCTGTGGCATATAGTCTATTGTTTAT
CAGTttcaatatttaatttttcatggTTTTATGGTATACAAACTGAGATG
GAATTATGTGTTTGTTCAAGAATcatcaatttaaaaaatgatcagAAGAC
TCGTGTGAATAATGATGTCGAGATTTCCTACAATTCTGACAGTAAATCTG
TACACGATTGTAATGTAAATTTGATAACGTTTATACAGTTTTATTTTGCA
AATAAATGTTGGTAATTTTGTATCTTGCTTCTTATTTAGCATAGAATGCT
CtatctttttaccattttgaacATTTGAATGAAGTGAGTTGCAGAAAgat
gtttcagaaaaaaattcttcaaatggAGATGATTTGCCCATATGTGTTAA
AGACCGCAAAAGAAATCTTGAGATGATCTAAATAGCTTT Coding sequence (CDS) from alignment at sc0000117:93040..96828+ >TCONS_00010781 ID=TCONS_00010781|Name=TCONS_00010781|organism=Clytia hemisphaerica|type=CDS|length=5664bp|location=Sequence derived from alignment at sc0000117:93040..96828+ (Clytia hemisphaerica)
ATGTCATTCAACTTTGGAACACCAAGTACATCGGCATCCACAGGTGGTGG
ATTCAGTTTTGGTAGCACAGCCAAGCCTGCAGCATCAACAACTGGATTTT
CTTTTGGTGGTGCTACAACTTCATCATCGGCTGCCCCAGCTGCAGGTGGT
TTTTCGTTTGGTGCGAAGCCTGCTGCAAGTGTTGCACCAGTTGCTGGTGG
AGGGCTTTCATTTGGAGCAAAACCTGCAGCAACAGCTGCCCCTGGTGGGT
TTTCATTTGGTTCTACTCCAGCATCGACTGCAACCGCAGCTCCAACAGCA
GGTGGTTTTTCGTTTGGCGCAAAACCAACAGCCACTGCTACAACAACTCC
ATCATCAGGATTTTCATTTGGTGGTGGAGCAACCAGCACTGCAACAACAT
CAGCAGCAGCACCAAGCTCAGGCTTTTCATTTGGGTCATCAGCTGCAGCC
GCTACAACTACCACAGCCTCAAGTTTTTCTTTTGGAGGAGCACCAGTAGC
GAAGAGTGCTCCTGCCCCAGCGTTTGGAACACCAGCGAGCTCAGCAGCAA
CGTCAGCTGCTAAACCAACAGGATTCAGTTTCGGCACTCCAGCTGCTTCT
TCATCAACGACGACCACAACAGCATCAGGTTTCTCACTCTCAACAACTGC
TACTTCGGCTGCTGCAAGCACGGGTGGTTTCAAATTAGGAGGTGCCGCAA
CTACAAGTGCTACTACTCTGGGTGCAGGATTGAAACTTGGAGCAAGCACT
GCTACCACTTCTGGATCTGCAACGGCAACAGCTTCAGCTCTGTCAACCTC
TACATTGAAACAAGTTTCTTATAAGtCACTTGAAGAGACAGTTGACAAAT
GGCTTCACGATTTGAATGAACAAGAGAAgatatttttaaatcaagctgcA
CAAGTCAATATGTGGGACAGACAACTGATCGAGAATGGAGAGAAAATCAG
CGAAACACACAATGAAGTTGAAAGAGTGAAAGCAGAACAATCGCGTTTAG
ATCGTGAGCTCGATTTCATTTTGTCTCAACAAGAAGAACTCGAGGAACTA
CTGAATCCCATTGAAGCACAACTGAACTCACAACAGATGATTTCTTACGC
GCAACACGCTGATATTGAACGTGAACGCACTTATGGGCTTGCAGAAAACA
TCGACAGCCAGCTGAAACAAATGATGCAGAGCTTGAACGAGATCATCGAT
CATGTCAACACTTCCAACACGActcctaaaaatcaaaaagatgaCACCAT
GGTgcagatttcaaaaattctcaACGCTCACATGGACTCCTTACAATGGA
TTGACCAGAATACTAATAAACTAAAACAAAGAGTGAAAGAAGTTTCCCAA
ACTATGGACACACAACGTAGAGAACAANATTCTAAACGCTCACATGGACT
CCTTACAATGGATTGAATGTCATTCAACTTTGGAACACCAAGTACATCGG
CATCCACAGGTGGTGGATTCAGTTTTGGTAGCACAGCCAAGCCTGCAGCA
TCAACAACTGGATTTTCTTTTGGTGGTGCTACAACTTCATCATCGGCTGC
CCCAGCTGCAGGTGGTTTTTCGTTTGGTGCGAAGCCTGCTGCAAGTGTTG
CACCAGTTGCTGGTGGAGGGCTTTCATTTGGAGCAAAACCTGCAGCAACA
GCTGCCCCTGGTGGGTTTTCATTTGGTTCTACTCCAGCATCGACTGCAAC
CGCAGCTCCAACAGCAGGTGGTTTTTCGTTTGGCGCAAAACCAACAGCCA
CTGCTACAACAACTCCATCATCAGGATTTTCATTTGGTGGTGGAGCAACC
AGCACTGCAACAACATCAGCAGCAGCACCAAGCTCAGGCTTTTCATTTGG
GTCATCAGCTGCAGCCGCTACAACTACCACAGCCTCAAGTTTTTCTTTTG
GAGGAGCACCAGTAGCGAAGAGTGCTCCTGCCCCAGCGTTTGGAACACCA
GCGAGCTCAGCAGCAACGTCAGCTGCTAAACCAACAGGATTCAGTTTCGG
CACTCCAGCTGCTTCTTCATCAACGACGACCACAACAGCATCAGGTTTCT
CACTCTCAACAACTGCTACTTCGGCTGCTGCAAGCACGGGTGGTTTCAAA
TTAGGAGGTGCCGCAACTACAAGTGCTACTACTCTGGGTGCAGGATTGAA
ACTTGGAGCAAGCACTGCTACCACTTCTGGATCTGCAACGGCAACAGCTT
CAGCTCTGTCAACCTCTACATTGAAACAAGTTTCTTATAAGtCACTTGAA
GAGACAGTTGACAAATGGCTTCACGATTTGAATGAACAAGAGAAgatatt
tttaaatcaagctgcACAAGTCAATATGTGGGACAGACAACTGATCGAGA
ATGGAGAGAAAATCAGCGAAACACACAATGAAGTTGAAAGAGTGAAAGCA
GAACAATCGCGTTTAGATCGTGAGCTCGATTTCATTTTGTCTCAACAAGA
AGAACTCGAGGAACTACTGAATCCCATTGAAGCACAACTGAACTCACAAC
AGATGATTTCTTACGCGCAACACGCTGATATTGAACGTGAACGCACTTAT
GGGCTTGCAGAAAACATCGACAGCCAGCTGAAACAAATGATGCAGAGCTT
GAACGAGATCATCGATCATGTCAACACTTCCAACACGActcctaaaaatc
aaaaagatgaCACCATGGTgcagatttcaaaaattctcaACGCTCACATG
GACTCCTTACAATGGATTGACCAGAATACTAATAAACTAAAACAAAGAGT
GAAAGAAGTTTCCCAAACTATGGACACACAACGTAGAGAACAANATTCTA
AACGCTCACATGGACTCCTTACAATGGATTGAATGTCATTCAACTTTGGA
ACACCAAGTACATCGGCATCCACAGGTGGTGGATTCAGTTTTGGTAGCAC
AGCCAAGCCTGCAGCATCAACAACTGGATTTTCTTTTGGTGGTGCTACAA
CTTCATCATCGGCTGCCCCAGCTGCAGGTGGTTTTTCGTTTGGTGCGAAG
CCTGCTGCAAGTGTTGCACCAGTTGCTGGTGGAGGGCTTTCATTTGGAGC
AAAACCTGCAGCAACAGCTGCCCCTGGTGGGTTTTCATTTGGTTCTACTC
CAGCATCGACTGCAACCGCAGCTCCAACAGCAGGTGGTTTTTCGTTTGGC
GCAAAACCAACAGCCACTGCTACAACAACTCCATCATCAGGATTTTCATT
TGGTGGTGGAGCAACCAGCACTGCAACAACATCAGCAGCAGCACCAAGCT
CAGGCTTTTCATTTGGGTCATCAGCTGCAGCCGCTACAACTACCACAGCC
TCAAGTTTTTCTTTTGGAGGAGCACCAGTAGCGAAGAGTGCTCCTGCCCC
AGCGTTTGGAACACCAGCGAGCTCAGCAGCAACGTCAGCTGCTAAACCAA
CAGGATTCAGTTTCGGCACTCCAGCTGCTTCTTCATCAACGACGACCACA
ACAGCATCAGGTTTCTCACTCTCAACAACTGCTACTTCGGCTGCTGCAAG
CACGGGTGGTTTCAAATTAGGAGGTGCCGCAACTACAAGTGCTACTACTC
TGGGTGCAGGATTGAAACTTGGAGCAAGCACTGCTACCACTTCTGGATCT
GCAACGGCAACAGCTTCAGCTCTGTCAACCTCTACATTGAAACAAGTTTC
TTATAAGtCACTTGAAGAGACAGTTGACAAATGGCTTCACGATTTGAATG
AACAAGAGAAgatatttttaaatcaagctgcACAAGTCAATATGTGGGAC
AGACAACTGATCGAGAATGGAGAGAAAATCAGCGAAACACACAATGAAGT
TGAAAGAGTGAAAGCAGAACAATCGCGTTTAGATCGTGAGCTCGATTTCA
TTTTGTCTCAACAAGAAGAACTCGAGGAACTACTGAATCCCATTGAAGCA
CAACTGAACTCACAACAGATGATTTCTTACGCGCAACACGCTGATATTGA
ACGTGAACGCACTTATGGGCTTGCAGAAAACATCGACAGCCAGCTGAAAC
AAATGATGCAGAGCTTGAACGAGATCATCGATCATGTCAACACTTCCAAC
ACGActcctaaaaatcaaaaagatgaCACCATGGTgcagatttcaaaaat
tctcaACGCTCACATGGACTCCTTACAATGGATTGACCAGAATACTAATA
AACTAAAACAAAGAGTGAAAGAAGTTTCCCAAACTATGGACACACAACGT
AGAGAACAANATTCTAAACGCTCACATGGACTCCTTACAATGGATTGAAT
GTCATTCAACTTTGGAACACCAAGTACATCGGCATCCACAGGTGGTGGAT
TCAGTTTTGGTAGCACAGCCAAGCCTGCAGCATCAACAACTGGATTTTCT
TTTGGTGGTGCTACAACTTCATCATCGGCTGCCCCAGCTGCAGGTGGTTT
TTCGTTTGGTGCGAAGCCTGCTGCAAGTGTTGCACCAGTTGCTGGTGGAG
GGCTTTCATTTGGAGCAAAACCTGCAGCAACAGCTGCCCCTGGTGGGTTT
TCATTTGGTTCTACTCCAGCATCGACTGCAACCGCAGCTCCAACAGCAGG
TGGTTTTTCGTTTGGCGCAAAACCAACAGCCACTGCTACAACAACTCCAT
CATCAGGATTTTCATTTGGTGGTGGAGCAACCAGCACTGCAACAACATCA
GCAGCAGCACCAAGCTCAGGCTTTTCATTTGGGTCATCAGCTGCAGCCGC
TACAACTACCACAGCCTCAAGTTTTTCTTTTGGAGGAGCACCAGTAGCGA
AGAGTGCTCCTGCCCCAGCGTTTGGAACACCAGCGAGCTCAGCAGCAACG
TCAGCTGCTAAACCAACAGGATTCAGTTTCGGCACTCCAGCTGCTTCTTC
ATCAACGACGACCACAACAGCATCAGGTTTCTCACTCTCAACAACTGCTA
CTTCGGCTGCTGCAAGCACGGGTGGTTTCAAATTAGGAGGTGCCGCAACT
ACAAGTGCTACTACTCTGGGTGCAGGATTGAAACTTGGAGCAAGCACTGC
TACCACTTCTGGATCTGCAACGGCAACAGCTTCAGCTCTGTCAACCTCTA
CATTGAAACAAGTTTCTTATAAGtCACTTGAAGAGACAGTTGACAAATGG
CTTCACGATTTGAATGAACAAGAGAAgatatttttaaatcaagctgcACA
AGTCAATATGTGGGACAGACAACTGATCGAGAATGGAGAGAAAATCAGCG
AAACACACAATGAAGTTGAAAGAGTGAAAGCAGAACAATCGCGTTTAGAT
CGTGAGCTCGATTTCATTTTGTCTCAACAAGAAGAACTCGAGGAACTACT
GAATCCCATTGAAGCACAACTGAACTCACAACAGATGATTTCTTACGCGC
AACACGCTGATATTGAACGTGAACGCACTTATGGGCTTGCAGAAAACATC
GACAGCCAGCTGAAACAAATGATGCAGAGCTTGAACGAGATCATCGATCA
TGTCAACACTTCCAACACGActcctaaaaatcaaaaagatgaCACCATGG
TgcagatttcaaaaattctcaACGCTCACATGGACTCCTTACAATGGATT
GACCAGAATACTAATAAACTAAAACAAAGAGTGAAAGAAGTTTCCCAAAC
TATGGACACACAACGTAGAGAACAANATTCTAAACGCTCACATGGACTCC
TTACAATGGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010781-exon-sc0000117-1491911889:93040..93880 | TCONS_00010781-exon-sc0000117-1491911889:93040..93880 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1510915933:93040..93880 | TCONS_00010781-exon-sc0000117-1510915933:93040..93880 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1575043694:93040..93880 | TCONS_00010781-exon-sc0000117-1575043694:93040..93880 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1491911889:94621..94761 | TCONS_00010781-exon-sc0000117-1491911889:94621..94761 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1510915933:94621..94761 | TCONS_00010781-exon-sc0000117-1510915933:94621..94761 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1575043694:94621..94761 | TCONS_00010781-exon-sc0000117-1575043694:94621..94761 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1491911889:95268..95480 | TCONS_00010781-exon-sc0000117-1491911889:95268..95480 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1510915933:95268..95480 | TCONS_00010781-exon-sc0000117-1510915933:95268..95480 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1575043694:95268..95480 | TCONS_00010781-exon-sc0000117-1575043694:95268..95480 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1491911889:95876..96828 | TCONS_00010781-exon-sc0000117-1491911889:95876..96828 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1510915933:95876..96828 | TCONS_00010781-exon-sc0000117-1510915933:95876..96828 | Clytia hemisphaerica | exon |
| TCONS_00010781-exon-sc0000117-1575043694:95876..96828 | TCONS_00010781-exon-sc0000117-1575043694:95876..96828 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117 | supercontig | sc0000117:93040..96828 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007758 | Nucleoporin_NSP1_C |
Blast
BLAST of TCONS_00010781 vs. Swiss-Prot (Human)
Match: NUP62 (Nuclear pore glycoprotein p62 OS=Homo sapiens GN=NUP62 PE=1 SV=3) HSP 1 Score: 195.667 bits (496), Expect = 6.222e-54 Identity = 108/188 (57.45%), Postives = 142/188 (75.53%), Query Frame = 2
Query: 830 VSYKSLEETVDKWLHDLNEQEKIFLNQAAQVNMWDRQLIENGEKISETHNEVERVKAEQSRLDRELDFIXXXXXXXXXXXNPIEAQLNSQQMISYAQHADIERERTYGLAENIDSQLKQMMQSLNEIIDHVNTSNTTPKNQKDDTMVQISKILNAHMDSLQWIDQNTNKLKQRVKEVSQTMDTQRREQ 1393
++Y LE ++KW +L +QE+ FL QA QVN WDR LIENGEKI+ H EVE+VK +Q RLD+ELDFILSQQ+ELE+LL+P+E + Q Y QHAD ERE+TY LAENID+QLK+M Q L +II+H+NTS P + D + QI KILNAHMDSLQWIDQN+ L+++V+EV++ + +R+EQ
Sbjct: 328 MTYAQLESLINKWSLELEDQERHFLQQATQVNAWDRTLIENGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLSPLEELVKEQSGTIYLQHADEEREKTYKLAENIDAQLKRMAQDLKDIIEHLNTSG-APADTSDP-LQQICKILNAHMDSLQWIDQNSALLQRKVEEVTKVCEGRRKEQ 513
The following BLAST results are available for this feature:
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