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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010775 ID=TCONS_00010775|Name=TCONS_00010775|organism=Clytia hemisphaerica|type=transcript|length=1197bp
AAAAAAGCTCACCAATATTCAAGATAAGGGCACGTTGTACGATGACTGGG
TGCCCAGTAAACGTCATTATTCAACAAGAAACAAATGAGTCTGGTAACCC
ACATGAAAACCTGACAATTGAATTCACTGGAGACATCAAACACAGGGTTG
GTGATACCAAAGCTCGAAAGTTAACCTTAgctgaaaaaatgaaggtaGAA
GAAACCTTTACATCGACGAACAAGCTAAAGCCATCGAGTCTTTTTCGCGA
TAAATTGGCGGAAGTTGATGACTTGAGGTATGCTAGTGGAAACAGGAATG
GCGTTGGTGTTTCTGCAAAGGCATTACAAAAcatttcttcaaaattgaaa
aagaagcaAGATTCGTTAACAAATATGACGGAAGAATTGAGCAAATTACA
ACAAGAATACGTtatcaaagaaaaagataaagatcCTTTCGAAAAACGAA
AAGTTTATGGATACATTCATTACCCTTCAATATCTCTTTCTGGGATAAGC
TTAACTTTGACAGATGAAGGACTGATAAGATTCTACCACAAGGTAGCCCC
CATTGATGTGCTTTTTTTTGACGCAAGCGGTTCATTTGTCTCCCCAGTAC
CATGGCTGTTGAATgataagaaacaaaaaaagagaaTACTCCTATATGCT
CTTATGGCAAGATTACCGTCTGGTCGTTGCCCGCCTTTGCCTCTTATGGA
ATATATATCTTCGGAGCACAACATATATTCAATCCGACAGCCCTTTTCCA
GGCTAAAAGAAATGGAAAACAAAATCTATGGTAGTGGTGCAATAACCAAT
CCAAAGTTAATCATCACCGACTATAGCATGGCGATGATACAAGCAGTGTT
GTTAGAATTTACCGGTGGAAATTTGAAAAGCTACATGGAAAGAACTTTCA
GAATTGTTACTGGAAATGCGTCGAAAGAAGATCTTGTAAAAACCTTTTTA
AGGGTTTGTGCGTACCATTTCTTACAAATGTGCAAAAAGAACATCAAAGA
CACATTCAACGTCTCTCAACAGCATTTCATAATGAGAGCAGTCGGAAGGC
taatatgttttgatgatttgaaGGAGATGACCGAATTTGTCAATCACTTG
GCTGAAGTATCTTGCTCTAAATGGGTGACCAAAGATGTACAATCTTCTCT
CACTGAACTAGAGATCAGAATAAATAACTTTGATTATACCAAACAAG Run BLAST on NCBI protein sequence of TCONS_00010775-protein >TCONS_00010775-protein ID=TCONS_00010775-protein|Name=TCONS_00010775-protein|organism=Clytia hemisphaerica|type=polypeptide|length=398bp
KSSPIFKIRARCTMTGCPVNVIIQQETNESGNPHENLTIEFTGDIKHRVG
DTKARKLTLAEKMKVEETFTSTNKLKPSSLFRDKLAEVDDLRYASGNRNG
VGVSAKALQNISSKLKKKQDSLTNMTEELSKLQQEYVIKEKDKDPFEKRK
VYGYIHYPSISLSGISLTLTDEGLIRFYHKVAPIDVLFFDASGSFVSPVP
WLLNDKKQKKRILLYALMARLPSGRCPPLPLMEYISSEHNIYSIRQPFSR
LKEMENKIYGSGAITNPKLIITDYSMAMIQAVLLEFTGGNLKSYMERTFR
IVTGNASKEDLVKTFLRVCAYHFLQMCKKNIKDTFNVSQQHFIMRAVGRL
ICFDDLKEMTEFVNHLAEVSCSKWVTKDVQSSLTELEIRINNFDYTKQ Run BLAST on NCBI transcript from alignment at sc0000109:601668..602864 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010775 ID=TCONS_00010775|Name=TCONS_00010775|organism=Clytia hemisphaerica|type=transcript|length=1197bp|location=Sequence derived from alignment at sc0000109:601668..602864 (Clytia hemisphaerica)
CTTGTTTGGTATAATCAAAGTTATTTATTCTGATCTCTAGTTCAGTGAGA
GAAGATTGTACATCTTTGGTCACCCATTTAGAGCAAGATACTTCAGCCAA
GTGATTGACAAATTCGGTCATCTCCttcaaatcatcaaaacatattaGCC
TTCCGACTGCTCTCATTATGAAATGCTGTTGAGAGACGTTGAATGTGTCT
TTGATGTTCTTTTTGCACATTTGTAAGAAATGGTACGCACAAACCCTTAA
AAAGGTTTTTACAAGATCTTCTTTCGACGCATTTCCAGTAACAATTCTGA
AAGTTCTTTCCATGTAGCTTTTCAAATTTCCACCGGTAAATTCTAACAAC
ACTGCTTGTATCATCGCCATGCTATAGTCGGTGATGATTAACTTTGGATT
GGTTATTGCACCACTACCATAGATTTTGTTTTCCATTTCTTTTAGCCTGG
AAAAGGGCTGTCGGATTGAATATATGTTGTGCTCCGAAGATATATATTCC
ATAAGAGGCAAAGGCGGGCAACGACCAGACGGTAATCTTGCCATAAGAGC
ATATAGGAGTAttctctttttttgtttcttatcATTCAACAGCCATGGTA
CTGGGGAGACAAATGAACCGCTTGCGTCAAAAAAAAGCACATCAATGGGG
GCTACCTTGTGGTAGAATCTTATCAGTCCTTCATCTGTCAAAGTTAAGCT
TATCCCAGAAAGAGATATTGAAGGGTAATGAATGTATCCATAAACTTTTC
GTTTTTCGAAAGgatctttatctttttctttgataACGTATTCTTGTTGT
AATTTGCTCAATTCTTCCGTCATATTTGTTAACGAATCTtgcttcttttt
caattttgaagaaatgTTTTGTAATGCCTTTGCAGAAACACCAACGCCAT
TCCTGTTTCCACTAGCATACCTCAAGTCATCAACTTCCGCCAATTTATCG
CGAAAAAGACTCGATGGCTTTAGCTTGTTCGTCGATGTAAAGGTTTCTTC
taccttcattttttcagcTAAGGTTAACTTTCGAGCTTTGGTATCACCAA
CCCTGTGTTTGATGTCTCCAGTGAATTCAATTGTCAGGTTTTCATGTGGG
TTACCAGACTCATTTGTTTCTTGTTGAATAATGACGTTTACTGGGCACCC
AGTCATCGTACAACGTGCCCTTATCTTGAATATTGGTGAGCTTTTTT Coding sequence (CDS) from alignment at sc0000109:601668..602864 >TCONS_00010775 ID=TCONS_00010775|Name=TCONS_00010775|organism=Clytia hemisphaerica|type=CDS|length=1194bp|location=Sequence derived from alignment at sc0000109:601668..602864 (Clytia hemisphaerica)
TTGTTTGGTATAATCAAAGTTATTTATTCTGATCTCTAGTTCAGTGAGAG
AAGATTGTACATCTTTGGTCACCCATTTAGAGCAAGATACTTCAGCCAAG
TGATTGACAAATTCGGTCATCTCCttcaaatcatcaaaacatattaGCCT
TCCGACTGCTCTCATTATGAAATGCTGTTGAGAGACGTTGAATGTGTCTT
TGATGTTCTTTTTGCACATTTGTAAGAAATGGTACGCACAAACCCTTAAA
AAGGTTTTTACAAGATCTTCTTTCGACGCATTTCCAGTAACAATTCTGAA
AGTTCTTTCCATGTAGCTTTTCAAATTTCCACCGGTAAATTCTAACAACA
CTGCTTGTATCATCGCCATGCTATAGTCGGTGATGATTAACTTTGGATTG
GTTATTGCACCACTACCATAGATTTTGTTTTCCATTTCTTTTAGCCTGGA
AAAGGGCTGTCGGATTGAATATATGTTGTGCTCCGAAGATATATATTCCA
TAAGAGGCAAAGGCGGGCAACGACCAGACGGTAATCTTGCCATAAGAGCA
TATAGGAGTAttctctttttttgtttcttatcATTCAACAGCCATGGTAC
TGGGGAGACAAATGAACCGCTTGCGTCAAAAAAAAGCACATCAATGGGGG
CTACCTTGTGGTAGAATCTTATCAGTCCTTCATCTGTCAAAGTTAAGCTT
ATCCCAGAAAGAGATATTGAAGGGTAATGAATGTATCCATAAACTTTTCG
TTTTTCGAAAGgatctttatctttttctttgataACGTATTCTTGTTGTA
ATTTGCTCAATTCTTCCGTCATATTTGTTAACGAATCTtgcttctttttc
aattttgaagaaatgTTTTGTAATGCCTTTGCAGAAACACCAACGCCATT
CCTGTTTCCACTAGCATACCTCAAGTCATCAACTTCCGCCAATTTATCGC
GAAAAAGACTCGATGGCTTTAGCTTGTTCGTCGATGTAAAGGTTTCTTCt
accttcattttttcagcTAAGGTTAACTTTCGAGCTTTGGTATCACCAAC
CCTGTGTTTGATGTCTCCAGTGAATTCAATTGTCAGGTTTTCATGTGGGT
TACCAGACTCATTTGTTTCTTGTTGAATAATGACGTTTACTGGGCACCCA
GTCATCGTACAACGTGCCCTTATCTTGAATATTGGTGAGCTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010775-exon-sc0000109-1491911889:601668..602864 | TCONS_00010775-exon-sc0000109-1491911889:601668..602864 | Clytia hemisphaerica | exon |
| TCONS_00010775-exon-sc0000109-1510915933:601668..602864 | TCONS_00010775-exon-sc0000109-1510915933:601668..602864 | Clytia hemisphaerica | exon |
| TCONS_00010775-exon-sc0000109-1575043694:601668..602864 | TCONS_00010775-exon-sc0000109-1575043694:601668..602864 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109 | supercontig | sc0000109:601668..602864 . |
Blast
The following BLAST results are available for this feature:
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