TCONS_00010763 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010763
Unique NameTCONS_00010763
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length246

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010763 ID=TCONS_00010763|Name=TCONS_00010763|organism=Clytia hemisphaerica|type=transcript|length=246bp
GTCATGAGGGATTTATAAATAGAATTTTGTTTGTTGAATGTTTGTAAATA
TGCATTATGCATGAGATAGAAATATCTCAACCAGATATAGAAATTCAGAC
ATTCTTCAGCGAGCGTTCGTCCGGACAAGACGTATTGAGGATTGACGGAT
TGCGTGGCCATCAGACCTAGGTTAGCCTGGTTCCACAAGTGGACCCCGTT
GACCCCGGTCTGACTGCCATGCGCATCCACAAAGAATGCTGAAGNN
Run BLAST on NCBI

transcript from alignment at sc0000109:426735..426980

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010763 ID=TCONS_00010763|Name=TCONS_00010763|organism=Clytia hemisphaerica|type=transcript|length=246bp|location=Sequence derived from alignment at sc0000109:426735..426980 (Clytia hemisphaerica)
NNCTTCAGCATTCTTTGTGGATGCGCATGGCAGTCAGACCGGGGTCAACG
GGGTCCACTTGTGGAACCAGGCTAACCTAGGTCTGATGGCCACGCAATCC
GTCAATCCTCAATACGTCTTGTCCGGACGAACGCTCGCTGAAGAATGTCT
GAATTTCTATATCTGGTTGAGATATTTCTATCTCATGCATAATGCATATT
TACAAACATTCAACAAACAAAATTCTATTTATAAATCCCTCATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006037XLOC_006037Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010763-exon-sc0000109-1491911889:426735..426980TCONS_00010763-exon-sc0000109-1491911889:426735..426980Clytia hemisphaericaexon
TCONS_00010763-exon-sc0000109-1510915933:426735..426980TCONS_00010763-exon-sc0000109-1510915933:426735..426980Clytia hemisphaericaexon
TCONS_00010763-exon-sc0000109-1575043694:426735..426980TCONS_00010763-exon-sc0000109-1575043694:426735..426980Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:426735..426980 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.816926	0	0	2.7148	0	0	0	1.73753	0.688408	1.16379	2.07073	1.10574	37.2106	32.7867	9.73363	8.70001	0.613263	4.62534	2.60523	1.07838	0.934538	2.39099	0	2.11952	4.38549	12.9134	1.12017	1.653	1.81345	0.923808
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010763 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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