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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010760 ID=TCONS_00010760|Name=TCONS_00010760|organism=Clytia hemisphaerica|type=transcript|length=1078bp
CTTTGATTCTAGCGATGAACATACGAACGAACATGGGGTTTGACAAATCT
TCGTAAGAAATGATAAAAGACCCATCAGTTTGGAGTCTTGGTGACTCACT
AATGGAGTAAAAACATGAAGGTTAAGCATCTGATGAATAACAAATCCACG
GTCAGGGATTTGAGAACCTTTACGATACCCGATGATAGCGATGTTTAGAA
CGCCAGGATGATAGTGATACATGTCCCATAATTCAGCATACGAAACAAAA
CGAGATGAGGTTCTTCCGATGTCTCTATTAGTACGAAAAACATATCGGGC
AAACCCATTATCAAGAGAACGGATAGCAATCCATATATCCACCTGAATAT
TGGAGAATGAGCTGAAAATACTCAAGAAATAACTATACAGCGGACCGGAA
TTATAAAAACTTTCATGGATCCAAAACCGCAAAACAAGTTTACTACTTCT
AGTACTGTATTCATCAAGAGAACCATAGTCTTTATATCGATCATAATCAG
AGTTCATCATCAAATCGTATAAAGCTTTGTGAACATAACGGTCTGCCCGt
ttgctttgaaaaataatgaacCGATTCCTTGGCATCCAACCAAAATAAGC
CTGATGATTTCGCAGACATAAAACAAGGTTTATGCACCAGACCACAACAC
TCGTATTTGGGACACCATCTATTTCTTTTAACAAAGACGACGATTCAGTG
TAATAGTGTTCACTATAGTCTATATAGTGAAATGATTCAATGACCAGAAG
CGTCTGTATCTCTCTGCCAACCATCATTGAAAAGTCGCGTAGAAGTTCAA
CGAAATAACTCCTTTCTGGTGAAGTCAAACTTTGCATTTCCGTAGTTAGA
AATTGTTTATAGTTATGTATTTGTTGGCGAATCGAGCGTGCTTGTAAAGG
TGAATAAATCCAAACCATCACGCATGGAGTATCCAATAATGATTTCACCA
GGATTGTTACAGGTTGTAGAATATCGACACTTTCTATCATAGACTGTGGC
ATAAAATCCTTGAGATGAGTATTGAGTAAGAGAGTTACATTTCTTATTTC
GTCGCACGTAAAGAAACCGCCGTCAACG Run BLAST on NCBI protein sequence of TCONS_00010760-protein >TCONS_00010760-protein ID=TCONS_00010760-protein|Name=TCONS_00010760-protein|organism=Clytia hemisphaerica|type=polypeptide|length=359bp
VDGGFFTCDEIRNVTLLLNTHLKDFMPQSMIESVDILQPVTILVKSLLDT
PCVMVWIYSPLQARSIRQQIHNYKQFLTTEMQSLTSPERSYFVELLRDFS
MMVGREIQTLLVIESFHYIDYSEHYYTESSSLLKEIDGVPNTSVVVWCIN
LVLCLRNHQAYFGWMPRNRFIIFQSKRADRYVHKALYDLMMNSDYDRYKD
YGSLDEYSTRSSKLVLRFWIHESFYNSGPLYSYFLSIFSSFSNIQVDIWI
AIRSLDNGFARYVFRTNRDIGRTSSRFVSYAELWDMYHYHPGVLNIAIIG
YRKGSQIPDRGFVIHQMLNLHVFTPLVSHQDSKLMGLLSFLTKICQTPCS
FVCSSLESK Run BLAST on NCBI transcript from alignment at sc0000109:331055..332132 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010760 ID=TCONS_00010760|Name=TCONS_00010760|organism=Clytia hemisphaerica|type=transcript|length=1078bp|location=Sequence derived from alignment at sc0000109:331055..332132 (Clytia hemisphaerica)
CGTTGACGGCGGTTTCTTTACGTGCGACGAAATAAGAAATGTAACTCTCT
TACTCAATACTCATCTCAAGGATTTTATGCCACAGTCTATGATAGAAAGT
GTCGATATTCTACAACCTGTAACAATCCTGGTGAAATCATTATTGGATAC
TCCATGCGTGATGGTTTGGATTTATTCACCTTTACAAGCACGCTCGATTC
GCCAACAAATACATAACTATAAACAATTTCTAACTACGGAAATGCAAAGT
TTGACTTCACCAGAAAGGAGTTATTTCGTTGAACTTCTACGCGACTTTTC
AATGATGGTTGGCAGAGAGATACAGACGCTTCTGGTCATTGAATCATTTC
ACTATATAGACTATAGTGAACACTATTACACTGAATCGTCGTCTTTGTTA
AAAGAAATAGATGGTGTCCCAAATACGAGTGTTGTGGTCTGGTGCATAAA
CCTTGTTTTATGTCTGCGAAATCATCAGGCTTATTTTGGTTGGATGCCAA
GGAATCGgttcattatttttcaaagcaaaCGGGCAGACCGTTATGTTCAC
AAAGCTTTATACGATTTGATGATGAACTCTGATTATGATCGATATAAAGA
CTATGGTTCTCTTGATGAATACAGTACTAGAAGTAGTAAACTTGTTTTGC
GGTTTTGGATCCATGAAAGTTTTTATAATTCCGGTCCGCTGTATAGTTAT
TTCTTGAGTATTTTCAGCTCATTCTCCAATATTCAGGTGGATATATGGAT
TGCTATCCGTTCTCTTGATAATGGGTTTGCCCGATATGTTTTTCGTACTA
ATAGAGACATCGGAAGAACCTCATCTCGTTTTGTTTCGTATGCTGAATTA
TGGGACATGTATCACTATCATCCTGGCGTTCTAAACATCGCTATCATCGG
GTATCGTAAAGGTTCTCAAATCCCTGACCGTGGATTTGTTATTCATCAGA
TGCTTAACCTTCATGTTTTTACTCCATTAGTGAGTCACCAAGACTCCAAA
CTGATGGGTCTTTTATCATTTCTTACGAAGATTTGTCAAACCCCATGTTC
GTTCGTATGTTCATCGCTAGAATCAAAG Coding sequence (CDS) from alignment at sc0000109:331055..332132 >TCONS_00010760 ID=TCONS_00010760|Name=TCONS_00010760|organism=Clytia hemisphaerica|type=CDS|length=1077bp|location=Sequence derived from alignment at sc0000109:331055..332132 (Clytia hemisphaerica)
GTTGACGGCGGTTTCTTTACGTGCGACGAAATAAGAAATGTAACTCTCTT
ACTCAATACTCATCTCAAGGATTTTATGCCACAGTCTATGATAGAAAGTG
TCGATATTCTACAACCTGTAACAATCCTGGTGAAATCATTATTGGATACT
CCATGCGTGATGGTTTGGATTTATTCACCTTTACAAGCACGCTCGATTCG
CCAACAAATACATAACTATAAACAATTTCTAACTACGGAAATGCAAAGTT
TGACTTCACCAGAAAGGAGTTATTTCGTTGAACTTCTACGCGACTTTTCA
ATGATGGTTGGCAGAGAGATACAGACGCTTCTGGTCATTGAATCATTTCA
CTATATAGACTATAGTGAACACTATTACACTGAATCGTCGTCTTTGTTAA
AAGAAATAGATGGTGTCCCAAATACGAGTGTTGTGGTCTGGTGCATAAAC
CTTGTTTTATGTCTGCGAAATCATCAGGCTTATTTTGGTTGGATGCCAAG
GAATCGgttcattatttttcaaagcaaaCGGGCAGACCGTTATGTTCACA
AAGCTTTATACGATTTGATGATGAACTCTGATTATGATCGATATAAAGAC
TATGGTTCTCTTGATGAATACAGTACTAGAAGTAGTAAACTTGTTTTGCG
GTTTTGGATCCATGAAAGTTTTTATAATTCCGGTCCGCTGTATAGTTATT
TCTTGAGTATTTTCAGCTCATTCTCCAATATTCAGGTGGATATATGGATT
GCTATCCGTTCTCTTGATAATGGGTTTGCCCGATATGTTTTTCGTACTAA
TAGAGACATCGGAAGAACCTCATCTCGTTTTGTTTCGTATGCTGAATTAT
GGGACATGTATCACTATCATCCTGGCGTTCTAAACATCGCTATCATCGGG
TATCGTAAAGGTTCTCAAATCCCTGACCGTGGATTTGTTATTCATCAGAT
GCTTAACCTTCATGTTTTTACTCCATTAGTGAGTCACCAAGACTCCAAAC
TGATGGGTCTTTTATCATTTCTTACGAAGATTTGTCAAACCCCATGTTCG
TTCGTATGTTCATCGCTAGAATCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010760-exon-sc0000109-1491911889:331055..332132 | TCONS_00010760-exon-sc0000109-1491911889:331055..332132 | Clytia hemisphaerica | exon |
| TCONS_00010760-exon-sc0000109-1510915933:331055..332132 | TCONS_00010760-exon-sc0000109-1510915933:331055..332132 | Clytia hemisphaerica | exon |
| TCONS_00010760-exon-sc0000109-1575043694:331055..332132 | TCONS_00010760-exon-sc0000109-1575043694:331055..332132 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109 | supercontig | sc0000109:331055..332132 . |
Blast
The following BLAST results are available for this feature:
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