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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010756 ID=TCONS_00010756|Name=TCONS_00010756|organism=Clytia hemisphaerica|type=transcript|length=1894bp
TGTTAATATTGACggtcaatatattcttttagttttcaaaaaaattgatt
ggcAGTCGATGTAAAACATTCTTTGTCAACAATTTATATTTGACGAGTCA
ATGAAAAGCATTGAACATGggcctaatcaatgtttttgacCTAGTAGTGC
TTATCCCGGGAGGTAGAGGGGGCCCTCAAGGTTAAAGACCAACCGTACGT
GTTGgcctttttccaagcttccaaAGTGCGATCAAAGTGtagaaatgagc
aaagatgagaaaaagtaaactctaagggtgtaaaatttgtaaaTCTGCCC
ATTTTTTGCGTTAAAATGGCCACAACcattcaagaaaatgcaccgtaagg
gtcaattttcgcccaaatttactcaaatttggctaaattctCGTTTACGA
CATTGNTTACTGTCAATTATTTTGTTGCCAGCTGTCAAAAAATTGACTGT
TAATATTGACggtcaatatattcttttagttttcaaaaaaattgattggc
AGTCGATGTAAAACATTCTTTGTCAACAATTTATATTTGACGAGTCAATG
AAAAGCATTGAACATGggcctaatcaatgtttttgacCTAGTAGTGCTTA
TCCCGGGAGGTAGAGGGGGCCCTCAAGGTTAAAGACCAACCGTACGTGTT
GgcctttttccaagcttccaaAGTGCGATCAAAGTGtagaaatgagcaaa
gatgagaaaaagtaaactctaagggtgtaaaatttgtaaaTCTGCCCATT
TTTTGCGTTAAAATGGCCACAACcattcaagaaaatgcaccgtaagggtc
aattttcgcccaaatttactcaaatttagCTAAATTCTCGTTTACGACAT
TGCCAATCGTCTCAGTTACACATGCCAGGTTTATTTTAAGTATgtagaaa
aaacatttaaaaacttgACCATGATCTGTTAACACTtctcaagatttttc
aaaatttgcgaaGGTAATTGTATTGAAGTGAGATATTGCCTGAACCTTTC
ATAAATCTGCTGATTACAAATTACAGTATAATAGATctaatcggagtttt
tgatttttctaaaaaagcgatgcattgtgggattgtttcgggagtattac
aatagaattctctCGAAGAATTccaagagatttctattgtaatactccca
aaacaatcccacaatgcatcgttttttttgaaaaatcaaaaagctccgat
aagatctattggaCCACAGGTGTTAAATAAAAACCCTACACTAACTGTTT
TTAGAGCAATACCTTAAAATATTGACCGATGTCAAAAAGTATTGTCCCAA
GCTAGATAAATAAAGGAGGGGCAGAAGATTTCTCGGATATCAATAAAGtt
agatttaaaaaacaatttatatGTTAACAgctagttttttttcaaatgat
tctAGGCTCATTTGCAAGGAATCGACAATCGAACGAATAAATAGTCTGAT
GTTTCGATCTTTAGTGATGTTTGTCGGATTTGTTCAAAGATGTCGATTAT
GTCATTCAAAAATGGAACTAATCCAATTTACAAAGTTTCGTCAATGTTTC
AACTGATTAAATTGTCGATTCCGTGCGATTGTCATTGTCTGGATACTACA
GTtgtgtctccataactcaaacacacgaggggaacgcaaatttgttcgat
ttaaggaaATTGAGTAAAGTTTATATATAAGTTATTGTCAATTGAatgga
cgagaaaacttgttcgaattaaggaaacattcgaattatagaggttcgag
ttctGGGGATCCCTTCTTTGTTCAATTTtataattacacgttttttttta
taaggaacacgtttataaggaactcgaggctgaaaatggtctgagaaata
aggaattgttaaggaactgctcaggctgagaataaaaaatcaag Run BLAST on NCBI transcript from alignment at sc0000109:263697..265590 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010756 ID=TCONS_00010756|Name=TCONS_00010756|organism=Clytia hemisphaerica|type=transcript|length=1894bp|location=Sequence derived from alignment at sc0000109:263697..265590 (Clytia hemisphaerica)
cttgattttttattctcagcctgagcagttccttaacaattccttatttc
tcagaccattttcagcctcgagttccttataaacgtgttccttataaaaa
aaaacgtgtaattataAAATTGAACAAAGAAGGGATCCCCagaactcgaa
cctctataattcgaatgtttccttaattcgaacaagttttctcgtccatT
CAATTGACAATAACTTATATATAAACTTTACTCAATttccttaaatcgaa
caaatttgcgttcccctcgtgtgtttgagttatggagacacaACTGTAGT
ATCCAGACAATGACAATCGCACGGAATCGACAATTTAATCAGTTGAAACA
TTGACGAAACTTTGTAAATTGGATTAGTTCCATTTTTGAATGACATAATC
GACATCTTTGAACAAATCCGACAAACATCACTAAAGATCGAAACATCAGA
CTATTTATTCGTTCGATTGTCGATTCCTTGCAAATGAGCCTagaatcatt
tgaaaaaaaactagcTGTTAACatataaattgttttttaaatctaaCTTT
ATTGATATCCGAGAAATCTTCTGCCCCTCCTTTATTTATCTAGCTTGGGA
CAATACTTTTTGACATCGGTCAATATTTTAAGGTATTGCTCTAAAAACAG
TTAGTGTAGGGTTTTTATTTAACACCTGTGGtccaatagatcttatcgga
gctttttgatttttcaaaaaaaacgatgcattgtgggattgttttgggag
tattacaatagaaatctcttggAATTCTTCGagagaattctattgtaata
ctcccgaaacaatcccacaatgcatcgcttttttagaaaaatcaaaaact
ccgattagATCTATTATACTGTAATTTGTAATCAGCAGATTTATGAAAGG
TTCAGGCAATATCTCACTTCAATACAATTACCttcgcaaattttgaaaaa
tcttgagaAGTGTTAACAGATCATGGTcaagtttttaaatgttttttcta
cATACTTAAAATAAACCTGGCATGTGTAACTGAGACGATTGGCAATGTCG
TAAACGAGAATTTAGctaaatttgagtaaatttgggcgaaaattgaccct
tacggtgcattttcttgaatgGTTGTGGCCATTTTAACGCAAAAAATGGG
CAGAtttacaaattttacacccttagagtttactttttctcatctttgct
catttctaCACTTTGATCGCACTttggaagcttggaaaaaggcCAACACG
TACGGTTGGTCTTTAACCTTGAGGGCCCCCTCTACCTCCCGGGATAAGCA
CTACTAGgtcaaaaacattgattaggccCATGTTCAATGCTTTTCATTGA
CTCGTCAAATATAAATTGTTGACAAAGAATGTTTTACATCGACTgccaat
caatttttttgaaaactaaaagaatatattgaccGTCAATATTAACAGTC
AATTTTTTGACAGCTGGCAACAAAATAATTGACAGTAANCAATGTCGTAA
ACGagaatttagccaaatttgagtaaatttgggcgaaaattgacccttac
ggtgcattttcttgaatgGTTGTGGCCATTTTAACGCAAAAAATGGGCAG
Atttacaaattttacacccttagagtttactttttctcatctttgctcat
ttctaCACTTTGATCGCACTttggaagcttggaaaaaggcCAACACGTAC
GGTTGGTCTTTAACCTTGAGGGCCCCCTCTACCTCCCGGGATAAGCACTA
CTAGgtcaaaaacattgattaggccCATGTTCAATGCTTTTCATTGACTC
GTCAAATATAAATTGTTGACAAAGAATGTTTTACATCGACTgccaatcaa
tttttttgaaaactaaaagaatatattgaccGTCAATATTAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010756-exon-sc0000109-1491911889:263697..265590 | TCONS_00010756-exon-sc0000109-1491911889:263697..265590 | Clytia hemisphaerica | exon |
| TCONS_00010756-exon-sc0000109-1510915933:263697..265590 | TCONS_00010756-exon-sc0000109-1510915933:263697..265590 | Clytia hemisphaerica | exon |
| TCONS_00010756-exon-sc0000109-1575043694:263697..265590 | TCONS_00010756-exon-sc0000109-1575043694:263697..265590 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109 | supercontig | sc0000109:263697..265590 . |
Blast
The following BLAST results are available for this feature:
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