TCONS_00010752 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010752
Unique NameTCONS_00010752
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length420

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010752 ID=TCONS_00010752|Name=TCONS_00010752|organism=Clytia hemisphaerica|type=transcript|length=420bp
CGGCGATCGAAGAAAGACGAGAAACGAGTTTCTCAACGGTTTCGCAGGCT
AGCACCCTATGCTGCTTTATATATCTTACGCACGCAGATTGGGACAAGCT
GCGCTCATgcgttgaaaatatatttaaaatggTACCTTTCGATTCTGATA
ATCCTCGCATTTGCAGAAGAGCGCTAACTGAGATTAGTTAAGttaaccaa
aacaaaatggcaAATCAAGAGCTTCAAGatcaaatcaagaaaattgTCGA
GGATGAATTAAACAAGGAAGGAAACGTGGTGGCAAAGTTACAACAAAGAT
TAGAAAGAAAAAGATCATACGACCAAactgaatttgacaaaaaggGCCAC
GATGAACAATTCAAACATACAATCAATGTTTTGGAAACTGTCGACGACGC
TCTGGATGCACTTGAAAAAG
Run BLAST on NCBI

transcript from alignment at sc0000109:168808..169227

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010752 ID=TCONS_00010752|Name=TCONS_00010752|organism=Clytia hemisphaerica|type=transcript|length=420bp|location=Sequence derived from alignment at sc0000109:168808..169227 (Clytia hemisphaerica)
CTTTTTCAAGTGCATCCAGAGCGTCGTCGACAGTTTCCAAAACATTGATT
GTATGTTTGAATTGTTCATCGTGGCcctttttgtcaaattcagtTTGGTC
GTATGATCTTTTTCTTTCTAATCTTTGTTGTAACTTTGCCACCACGTTTC
CTTCCTTGTTTAATTCATCCTCGAcaattttcttgatttgatCTTGAAGC
TCTTGATTtgccattttgttttggttaaCTTAACTAATCTCAGTTAGCGC
TCTTCTGCAAATGCGAGGATTATCAGAATCGAAAGGTAccattttaaata
tattttcaacgcATGAGCGCAGCTTGTCCCAATCTGCGTGCGTAAGATAT
ATAAAGCAGCATAGGGTGCTAGCCTGCGAAACCGTTGAGAAACTCGTTTC
TCGTCTTTCTTCGATCGCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006026XLOC_006026Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010752-exon-sc0000109-1491911889:168808..169227TCONS_00010752-exon-sc0000109-1491911889:168808..169227Clytia hemisphaericaexon
TCONS_00010752-exon-sc0000109-1510915933:168808..169227TCONS_00010752-exon-sc0000109-1510915933:168808..169227Clytia hemisphaericaexon
TCONS_00010752-exon-sc0000109-1575043694:168808..169227TCONS_00010752-exon-sc0000109-1575043694:168808..169227Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:168808..169227 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.84353	3.72348	3.15518	1.43258	2.22863	0.338608	1.6304	1.68584	2.10069	0.579953	1.40631	0	0.635778	0.360639	0.903603	0.771769	0.691672	0.404087	0	0.204956	0.944993	0	2.06787	2.8255	0.59968	2.41767	0.469623	1.50487	1.99619	1.54823
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010752 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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