TCONS_00010745 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010745
Unique NameTCONS_00010745
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1255

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010745 ID=TCONS_00010745|Name=TCONS_00010745|organism=Clytia hemisphaerica|type=transcript|length=1255bp
ATTCTTTGCTTACCTCTTGCTTTTGTAGAGTACCGTGAAGCTTCTTGATT
TGATCAAAATCAGTGATTGAATTTATATCGATATCAAATGTTGTTTCGAT
TTCgtccgccattttgtttagaactTTTCGATTTCCACGAATTTAGTAAA
AGTTTAAATTACCGAACGAAAGtaaagcaaatgagatttttgaTAGTAGC
CATGGATATGGCTTCATTCGAAAGCGAGGCTGACTCCCAAACAACCAGAC
GCACAGAAACAAGCGAGCAAGGCCGATAAACAAAGTTGAAGTTCAAAGCC
GCGAAAAGTTTCTGGTGTTGAACAGTTGAAGATTTAGTTGTTTTATAGGA
TTTTATATTGGTTTTTAGTTTATAATGTTTAGAAATACTTTCCAGTCAGG
ATTTCTCTCAATACTGTATAGTATTGGCAGTAAACCACTGCAAATTTGGG
ATAAAACAgttCGGAATGGTCATATTAAAAGGATAACAGACAGTGATATT
CAATCCCTTATATTAGAAATAAATGGAACAAATGTCAGTACTACATATAT
AACGTGTCCGGCAGATGCTTCAAAAACACTTGGCATCAAACTACCATTTC
TAGTAATGAtaatcaaaaatatgaaaaaatatttcacatttGAAGTACAG
GTACTAGATGATAAAAAGGTACGAAGAAGATTCAGAGCATCAAACTACCA
ATCAACGACACGAGTCAAACCTTTCATCTGTACAATGCCAATGAAATTAG
ATGACGGTTGGAATCAAATTCAGTTCAATTTATCAGACTTTACACGGCGT
GCATACGGAACAAATTATATCGAAACCCTACGAGTACAgATTCACGCCAA
CTGCAGGATACGACGTGTATACTTCTCCGACAGATTATACTCCGAAGACG
AACTACCTGCGGAATTCAAATTATATCTACCGGTACAAAATAATGCACAA
GCTGTACAAAAAGCGATGTGAACGGAATGGATTTTGGAATGGTCCAACAC
ACTGTataatattattattttgtttatttttaagaGCTTATTACATCATA
ACAATAATATCCTGCCTATATTCCCAAATACCTAGTTTAGACTAAATCTT
TTATTGACCCTAAACAAGTCCAGATCGTGTTTTGATTGGGCAATTTTTAG
TAAAAAAGGGTATTGATATTAATTAACaacttatttttcattattgTACA
TAATTGATATGATGAAAGAAACGATATTATGATAATTTAATTAATCAGAA
AAAAG
Run BLAST on NCBI

transcript from alignment at sc0000109:527336..535266-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010745 ID=TCONS_00010745|Name=TCONS_00010745|organism=Clytia hemisphaerica|type=transcript|length=7931bp|location=Sequence derived from alignment at sc0000109:527336..535266- (Clytia hemisphaerica)
ATTCTTTGCTTACCTCTTGCTTTTGTAGAGTACCGTGAAGCTTCTTGATT
TGATCAAAATCAGTGATTGAATTTATATCGATATCAAATGTTGTTTCGAT
TTCGTCCGCCATTTTGTTTAGAACTTTTCGATTTCCACGAATTTAGTAAA
AGTTTAAATTACCGAACGAAAGTAAAGCAAATGAGATTTTTGATAGTAGC
CATGGATATGGCTTCATTCGAAAGCGAGGCTGACTCCCAAACAACCAGAC
GCACAGAAACAAGCGAGCAAGGCCGATAAACAAAGTTGAAGTTCAAAGCC
GCGAAAAGTTTCTGGTGTTGAACAGTTGAAGATTTAGTTGTTTTATAGGA
TTTTATATTGGTTTTTAGTTTATAATGTTTAGAAATACTTTCCAGTCAGG
ATTTCTCTCAATACTGTATAGTATTGGCAGTAAACCACTGCAAATTTGGG
ATAAAACAGTAAGTATTTTTTATAAATTTTGAAAACATTCTTTTGTACCG
TAGCCTGGATATTTATTCCTATTTCTAAAAAAAGGGTGATAGACTTACAT
GGGGTACCCTGATAACAGCTGGTAATAATTTTCTTACACCCGTGGTAAAC
CTCTGAAGGTGCTTGAAAATGCGCCAGAAAGTCAAAAACTAAATTTTCCT
GGCCCTCCTTTTAAAACACACAATGGCGCAAATATGAGAGGAGACTCTCG
CGCATGCCAGCGCTTTTTCCTGCAGAAAAAAATTCAGCCAAATCTCCCGC
ATTTTCAGGATTTTCTCCTGCACCCTCCCGCATTTCCAAAAAATTTTTTC
GATTTCCAGAAAGAAATCCTGATTTTGAATGAAAAAACGAAAACAAATTT
TGACTCCCCCAATTTTTCCAATCATCTGAAAAAAGTTTGGCAGATAAAAT
ATTCCATTTTTTTGGAAAAAAATTTCCCCGATATTATATTACTGTACAAT
TTTGGGAAGAAATCTCCCAATTAGGATTTCTGAAAACCAGAAAAAACATA
ATATTTCAGATTTTTGCTTCAAAATGAACATCTCAAGTTGGCAGGTCTGT
TTTTAACGAAATTAAAATTCAAAAAAACTTTGAAAAATTACCTAAATTTG
AGTCAACCTCAAAAACTAATTAAAGAGTACACAATCTGTGCACAGCTGGA
TAGGCTATTTCCCAGAAATTTTGCTGCAGCCATACACTGGCCAATTTACA
CTTGCAGAATTTTAACTTTAGTGTGTACAGTAATCAAGGCCTAACAAATC
AAAGAACTATCTCTGAAATTAGTTAACAAATTTTGGTTGGTTGATTAGCA
ATCAATCATTTTATAGAACTTTTCTCAGTCAGTTAGTCACACTAGGAAAT
CAAGCTTTCAGAAAAAACAACATCAGTCATCTACAGGATGTATTTACAGC
AACAATAATGATAGTTACCTGAATCAAGTTCAAGTGTTCAAGTTCCCAAG
ACAGTTAAAATTAAAACTTGAAAACTTAAAGTGAGACAAAATCACAGATT
GCAAACGTACAGCCAGCCAGAATATCAACCAACCAAACTTTGTCATTCAA
TTCCCGAGACAGCACTTCAATTTTTAAGGCCTTGTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGATAGCGCT
TCAATTTTTAAGGCCTTGTTTATACGCTAAAGTAAAAGTAATTCCGCACA
TGTAAATGGGCCTGTGTTTGAGGTCCGGCAAAATTTTCAGGAAATAGCCT
ATCCGGCGGTGCGCAGATCTAGGTGGGTTCCGTCTCCTTCGTAGATTTTT
TTCTTGGGATGCTGATCTTCAAATTAGTTTTCAAGGTTGGCTTGGCTCAA
ATTTTTTAATCTATGGCTCAGAAACTTTAGGCAATTTCTCATAGTTTTTG
AAAATGTTAATTTCATTAAAAAGCGCCGGGTTATTTTTTCATGAATCCTT
TTAGAAGTTTTGCGGCTCATTTTTTGCTTGAGAGTCAAGTAAACGATATA
GCGCTTTCGCAACATTAATCTTTAATACGCATTTCGGCGGGACGCTAGTG
TGACTAACTGTCAGTTAAGAACAATTTGCCAATTTGTGTGCACATTCGCA
ATCAAAAAATGATTACCTCTATCTTGTTTTTCCAAAAGTCAGATGAGCTA
CAAGATGACCTGATTTTTAAATAAAAAGAATGTATGTGATTTCAGGGTCA
AACGGATTGCCAAAACTATAATTGAAAAAGTATGATTAATCATTATTATG
ATAACAGGATAGTTTCGCTGCAACTTTAGGTCATTTTCAATCCAATTGTT
TGCAATACAAAAAATAGTGCTAATAATCTTTCTTGTTATCTAAACCATAA
AAAACTCTTGAAAGGTTTGGTTTTATTTGTCTTGAAGATTTTTGAAAATC
AATGATATACTGTGAAAGTAGTTTAGGTATAAACTTATTTCTTTTTTTAT
TATTTTTGTTGGCGAAAACTTTTAGAAATCATTGTGCATCAATCGTTGTG
CTCGCTATAATATAGCAAGTTGAACCTGATTGGTCGAAAAAAACTGTGAA
ATATTTGTAATAATTATCAGAGCCGCGAACTCGCTCACTAAACAATTATG
CGCAATTATTTCATTTAGTCGCGGCTTTTTTATCTTAGAAAGAGTTACGA
CGGTAAAACATATCAAAATCAAATCCTTCCTTCAATAAGTAGACCTTTCT
CAAAGCTAATCACGATTGCCTGTTGCTTTGAAATAAAGAAGTGCAACCTT
GTAACAATTAAGTAAACGTTCACCATCTCCGTCGCGTATGCTATCATTAA
TATTTCGCAAAATCATGTTGATTGAAAACAAAGTCCCCTTTCAAGCTCTT
TTCATTGATCCTTACAAACTTTTCAGCTCGCGATTGAGAGAGTGATATAT
ATTTTTTTACTTCTGTTTAGTTGATATAAAAGGTCTGCCAAACACTTCAC
CGGAGAGCCTTTAAATTGTGAGCTTCCCTATAATTATAAACTTTAAAAAT
GATAGAAAGAGAACCGAGAGTGTATTCTCCTCTCGCTGAGCTAATGGTTT
GTTTGCTCTTTCCATTGTTGGCCAATTACCTTACGAATGGTTTATATAAA
TCTAATAGCGAGAGATTGATCTCTTTCGTGTTCTTGCTTTCTCGTTCTCT
TCAAAAACATGTAAAAAACCTAACAAATCGACACTCACACTGCTACTCTG
GATTCTAAGACATTCAACGTTCTGTAAAATGCAAATAAAAATAAAAACAT
AACAGTAAAGATTGCAGCCAAAGCAGCGATATAAACTTTCAGATTAAAAA
CATTGCTGCAGGGCTGTATTTTTAGGAAGAAAATAGCTCTAAAACCCTTG
AAATTGTTGAACCGCAATCTTTGTTTATGCAAAAGGCACCATTTTTTAAG
GGACGTTTTACGAATAATTATTACGGTTAATAAACAATAGAGAAGTTTCT
GATTCGCCAATTCATTTTCTTGCAATTTTTGACTAAGTCTGGCATGTTCT
AAACGTTTTCGCCAACAAAAATCATAAAAAAAGATAAAGTTTATACCTAA
ACTACTATGAAAGCACTGTACAAGTTAAAAAATGAAAAACAATAAATAGA
TGAAAAAAGTTATCAAACTGTCAGAATCATTCAACTTTGAGAGAGAATAA
ATTTGTAAACATTGGATTTTTTTTATTGGCAATCCTTTGGGGGTCTTCTA
GTTTAGAATGTGCATTGTTGGGACCTCAAAGAAAGTCAGGCTGTGAATCA
GAAACATTAAGTGTCAAAAAGGCTGTGAAACAGTCTACCATCTGGTTATC
AAGGCTAGAAACTTTTGTACTAAGATATATGAGAAGTATACTGAAAAATA
CACTCATTGCTTAGCCACCCAGGGAAAGTGGCTTTAAAAGATCCACCTTA
GATGAGACTAAGGGAAATGGGCAATAAATGCCTTAAAATCTTTTTTTTTT
ATTTCAGGTTCGGAATGGTCATATTAAAAGGATAACAGACAGTGATATTC
AATCCCTTATATTAGAAATAAATGGAACAAATGTCAGGTATGAACCACTT
TTTCTACTACAATTTTATACTAGTAGCAGCCAAACATGGGCACTTATTTT
TGCTGGTTAGGCCTTCTGATTCTTCTGATCTAATCTTGACATTTCAGGCA
AAAAATTTATTTTTGTGCTTAAATTTTTTATTTTGATGTGTTCAATTCAT
ATAACAATCAAGTGGTTTATACATGCTTTTTTGTAAGAATGATGTTTTTC
GTTTCGTGATGGTTATTCTTAAATTTTTTGGGAAATAAAATATAAAATAT
TTTTAATATAAAATATTCTTGAGGTTAGTATTCAATCTAGCCTAATTCTT
GCATGTAAACGTACCTCAAGCAAAGATTTGTCATTTTTGTGAAATTTTTC
AACATNAGTATTCAATCTAGCCTAATTCTTGCATGTAAACGTACCTCAAG
CAAAGATTTGTAATTTTTGTGAAATTTTTCAACATTGCTGGGAAATAATT
GGCAATTTACTGGTATAATTGCATTCTTAGGTCTAGTTACCAAATTCTAT
GATGGTGTTATTCATAGCATATTTTAGTTTTTTTCATGAAAAATTTCATC
ATGAGTAGTCTTATAAAGTATATTGTTTTAAAGAAAGCATATATTTTGTT
GCCAGTAACATCTTCAATGATATTTTTATCTTCTTTTGTTTTCACTGTTT
TTAATATTGATTTATGTTATNTTTGGTTCCAAAAAAAAAGAGTTTTCACT
GTTTTTAATATTGATTTTTGTTATCCCTTTTAGTACTACATATATAACGT
GTCCGGCAGATGCTTCAAAAACACTTGGCATCAAACTACCATTTCTAGTA
ATGATAATCAAAAATATGAAAAAATATTTCACATTTGAAGTACAGGTATG
TCCCAGACACAGCAGGAAAAAGGAGGAATAGTATCACTGAAAAATAACTC
TGTTATTCTGGTCTGTAATTTGAATAAACTCAACATGTAAAAATGTTGTT
AATTAACATGAAAGTAGTTTTGGGAAATGCATGCTGATGCATGTCTCCTT
CAGTGATACGTAACGAGTTACCTTTTTTACTGTTACTTTTCATTATCAGA
TTTTGGTCTCACTCTTAAGAATTAGTTGATCAGTGTTATTCTGTCATTTG
AATAATCTGTAACAAAATCTATTAGAGGGGTAACGTCACTTTACTGTAGC
ACTGGACAGATTAATGAGGTTTAAGTATGGGCTTGAATTGAATTATGTTT
GTCATCTTGACATCAGAAAGTTGTATCTTACTATGCTAAAAGAATTTCAT
ATTTTGTGTCTGTCACGGAAGATGGTAGCAAAGCTGCTATTTCGAATGGT
ATGTCAGGGGGTTGATTCGAGTACGAAAGAGAGATTTTGTGTAGTTTTAA
GACTAAATTGTTTTTACGTAACAGGTACTAGATGATAAAAAGGTACGAAG
AAGATTCAGAGCATCAAACTACCAATCAACGACACGAGTCAAACCTTTCA
TCTGTACAATGCCAATGAAATTAGATGACGGTTGGAATCAAATTCAGGTA
AAGGAAAAATTAATGAAACATTCAGATTCATTCTTCTCCATGGCGTGGTG
TCAGAAGTTGGGAAACAAAACACTTGAGTATGTGTTTGTATACAAAAAAG
TCTTAAAGTGATTCTGAGTTGTTTGTTTACCCTTTGAAATGATGAAATCT
TACTGGTTGAATTTTCAAACACAATGAACTGGAATGCTCCTGGAGTGCTC
CTAACTCAAAAATTTCTCTTGGATAAAGAATGAGAAAATCAAATATAATT
GTTGTATATTTTGAAACTATTTTTAGTTCGTATGGCTGCACTCGGCCATT
TTCACAAAAACGTGAAAGATGACCTTTCTATTGATTCGCAATGAACTCCA
AACAAAAACCCTCAGATTTGAATTCAAAGGCTCTAAAACCACTTGATCAA
CAAAACAATTTAATTACAAAGGGTTTGCTTGAGTAACATCATTATGGTCA
ATTTTATCTGCTTCGCCTTTTAGTTCAATTTATCAGACTTTACACGGCGT
GCATACGGAACAAATTATATCGAAACCCTACGAGTACAGGTAAAATAATT
TTCCTTATCTACATCTATCAAATCCTGATTGCATTACCAAATTTCAGCAT
GTTTTTCTCTGGTAGTCAGGTAGAGTTCCTCAAAATACCATACTTTACTA
GTTCTTTTATCCACCAAAACTGATTTATTTAGTTCATGCGTCAAATTTCC
GCTAATTTAGACCCTCGAATATGACTTTGAACAATGAGATTCATATTCTT
TGCCGTCATGGCTCCATCTGAAAACTTGATTTTTAACATTTTTATTCGTT
TTAGCATAGCTTTTGATCTAATTGACCAAATTTGATAAATAAGCCATCAA
AGTTTGATTTTTTCTTCCTCGTTCGAATGAAAACACTATAATTTACTATA
AATGAATATAGCTTTTCATTTTATTAAAGTGCCTGACTTATTTCTGGCAC
ACCCGGTAGAAAGTTCCAGTTTTCCCATCTCTGATGATGCTTTGAAAAAA
ATTCTGTTGTTTTTAGATTCACGCCAACTGCAGGATACGACGTGTATACT
TCTCCGACAGATTATACTCCGAAGACGAACTACCTGCGGAATTCAAATTA
TATCTACCGGTACAAAATAATGCACAAGCTGTACAAAAAGCGGTGAGTTA
AATTCCATTTGCTGTAAGTGTGCACTTTTTTTACTACCATGTGGAAACCA
CACTACCATGTGGAAACCAGTCTCGAGGGAATTACGCTTAATTACGCTGA
CATGGTTTCCACACGGCAGGAAAAGTCAAAGAAAAGCGAACGAACTTTGG
TTTAAAGGTTAGAATGTACCTTTTCCAAATACGTCAAAATGTATTGTTAT
GTTAACCTTATTTCCAACAATTTTAATGCCAAGATCTGCCAAGATTGCTC
AATATCATTGGTGGCTGTCACAAACTTATGTGAAGTGCTTTAATATATAC
CATTTCTGGATTAAATTTAGCTTGGATTAATCTGGATCAATTTTTGCCAT
TTCCCAGAAATTTTAAAGTCCTCTCGAGATAATTATATACGAAGTAAATA
AAATAAATTATGTGAACTATGGAACTATTAGATTAATTGATTCTTAATGA
ATCGCAAAAGTCTACGCGAAAACTGTCAACTAATACTCTCTTTGCATTTT
ATTTAGATGTGAACGGAATGGATTTTGGAATGGTCCAACACACTGTATAA
TATTATTATTTTGTTTATTTTTAAGAGCTTATTACATCATAACAATAATA
TCCTGCCTATATATCCAAATTCTTTGATTTTTTTACACATTTTCTCAATT
TACAATGAAACCGACACGTAATGGTTTAATTTTGAGTTCGAAACGTTTTG
AGATCGAATCTTTAAAAACAAAATTTTAAAGATGACAGTGTCTATCTATT
CTGTTAATCTCAGGTTTTCGTTTTTGATTTTGCTTACTAAAAAAGAGACC
AAGGTATAATTCATGATATGCACCATTGCAATGTCTTCTACGGACCCAAA
AGCTGATTGGTTAAAAGTGACGTATTGACTGATTTTACGTCATTTACAAC
CAATCAGCTATTGGGTCCGTGAAGTAATGCGAGAAGACATCGCAATGGTG
CATATCATGAATAGGAGAAATCATGGAGAATTTTAAAATTCATCAAGGCA
AATCTTACTCGTATTGTAGTTTTTTTGCTGTGTAACGTCCTATCTACTCC
CAAATACCTAGTTTAGACTAAATCTTTTATTGACCCTAAACAAGTCCAGA
TCGTGTTTTGATTGGGCAATTTTTAGTAAAAAAGGGTATTGATATTAATT
AACAACTTATTTTTCATTATTGTACATAATTGATATGATGAAAGAAACGA
TATTATGATAATTTAATTAATCAGAAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006019XLOC_006019Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010745-exon-sc0000109-1575043694:534809..535266TCONS_00010745-exon-sc0000109-1575043694:534809..535266Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1575043694:531230..531309TCONS_00010745-exon-sc0000109-1575043694:531230..531309Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1575043694:530372..530483TCONS_00010745-exon-sc0000109-1575043694:530372..530483Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1575043694:529720..529842TCONS_00010745-exon-sc0000109-1575043694:529720..529842Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1575043694:529178..529243TCONS_00010745-exon-sc0000109-1575043694:529178..529243Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1575043694:528575..528700TCONS_00010745-exon-sc0000109-1575043694:528575..528700Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1575043694:527955..528060TCONS_00010745-exon-sc0000109-1575043694:527955..528060Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1575043694:527336..527519TCONS_00010745-exon-sc0000109-1575043694:527336..527519Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1510915933:534809..535266TCONS_00010745-exon-sc0000109-1510915933:534809..535266Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1510915933:531230..531309TCONS_00010745-exon-sc0000109-1510915933:531230..531309Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1510915933:530372..530483TCONS_00010745-exon-sc0000109-1510915933:530372..530483Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1510915933:529720..529842TCONS_00010745-exon-sc0000109-1510915933:529720..529842Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1510915933:529178..529243TCONS_00010745-exon-sc0000109-1510915933:529178..529243Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1510915933:528575..528700TCONS_00010745-exon-sc0000109-1510915933:528575..528700Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1510915933:527955..528060TCONS_00010745-exon-sc0000109-1510915933:527955..528060Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1510915933:527336..527519TCONS_00010745-exon-sc0000109-1510915933:527336..527519Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1491911889:534809..535266TCONS_00010745-exon-sc0000109-1491911889:534809..535266Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1491911889:531230..531309TCONS_00010745-exon-sc0000109-1491911889:531230..531309Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1491911889:530372..530483TCONS_00010745-exon-sc0000109-1491911889:530372..530483Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1491911889:529720..529842TCONS_00010745-exon-sc0000109-1491911889:529720..529842Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1491911889:529178..529243TCONS_00010745-exon-sc0000109-1491911889:529178..529243Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1491911889:528575..528700TCONS_00010745-exon-sc0000109-1491911889:528575..528700Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1491911889:527955..528060TCONS_00010745-exon-sc0000109-1491911889:527955..528060Clytia hemisphaericaexon
TCONS_00010745-exon-sc0000109-1491911889:527336..527519TCONS_00010745-exon-sc0000109-1491911889:527336..527519Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:527336..535266 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.99733	5.6263	4.01796	7.11706	15.902	9.50342	9.4187	12.0194	0.426474	2.03763	1.42536	2.2411	1.0441	0.365294	0.585795	0.546546	0.469319	0	0.39565	0.275274	0.605298	1.82139	3.17271	3.73786	48.3897	21.9382	1.25863	5.2677	1.27579	1.34602
Blast
[Close]
BLAST of TCONS_00010745 vs. Swiss-Prot (Human)
Match: CFA20 (Cilia- and flagella-associated protein 20 OS=Homo sapiens GN=CFAP20 PE=1 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 1.292e-128
Identity = 177/190 (93.16%), Postives = 183/190 (96.32%), Query Frame = 3 
Query:  381 RNTFQSGFLSILYSIGSKPLQIWDKTVRNGHIKRITDSDIQSLILEINGTNVSTTYITCPADASKTLGIKLPFLVMIIKNMKKYFTFEVQVLDDKKVRRRFRASNYQSTTRVKPFICTMPMKLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQNNAQ 950
            +NTFQSGFLSILYSIGSKPLQIWDK VRNGHIKRITD+DIQSL+LEI GTNVSTTYITCPAD  KTLGIKLPFLVMIIKN+KKYFTFEVQVLDDK VRRRFRASNYQSTTRVKPFICTMPM+LDDGWNQIQFNL DFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQN A+
Sbjct:    3 KNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQNKAK 192
The following BLAST results are available for this feature:
BLAST of TCONS_00010745 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CFA201.292e-12893.16Cilia- and flagella-associated protein 20 OS=Homo ... [more]
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