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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010737 ID=TCONS_00010737|Name=TCONS_00010737|organism=Clytia hemisphaerica|type=transcript|length=281bp
GCCGTCGTTGCATATATCGCTTGTTGTTGATCGTGGTGTCAATGCCTCGT
TGCACATACCACCTTACAAGCACAAACCACACGATTTGGAACTGACGTCA
TCAACAGTTATGCTGAACCAATCAGTTGGGTCATGTTGGCTTTGTACCTT
TTGATTGCTAATGTTCTTTTGTTGAACCTGTTGATCGCTATCTTTGGGTA
CGTACATACAATAAAGCTAGTCGTAGTTaggcacccctgtctcacagctc
cggTTTAACCTTTTACCACAgctgggataaa Run BLAST on NCBI transcript from alignment at sc0000109:161712..165468- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010737 ID=TCONS_00010737|Name=TCONS_00010737|organism=Clytia hemisphaerica|type=transcript|length=3757bp|location=Sequence derived from alignment at sc0000109:161712..165468- (Clytia hemisphaerica)
GCCGTCGTTGCATATATCGCTTGTTGTTGATCGTGGTGTCAATGCCTCGT
TGCACATACCACCTTACAAGGTATGAGAGTTACATTTACATTTTTTCTAT
ATTTTTTCTTTACCATTCAGAGGCAACTACACAGGATTTATTGTCATTTT
TTTCTGAACAGATTTTTATTTTCTTTACATGTCATTCTTGAGATTTTGAC
GATCAGCGGTTTTCAAACTTTTACAAGGAACTTTGCACTGTGGCAAAGAC
AGGTGTTAATTTCTGCTTTCTCTTGTTTTTCACGTACGAAACGTTACAAT
TAAATTACGGAGTTGAAAGAATTTTGGATATCACTGCCACGTTTGCACAT
ATCAACTTGGAGATGTCAATGCCTCGTTGCACGCATCAATTTAGAGATAT
GGTTGCCTCGTTGCGCCTATTATTTTGAAAGATATCCCTGCCGTCGTTGC
ATATATCGCTTGTTGTCGATCGTGGTGTCAATGCCTCGTTGCACATACCA
CCTTACAAGTTGAAACAATTTTGGATATCACTGCCACGTTTGCACATATC
AACTTGGAGATGTCAATGCCTCGTTGCACGCATCAATTTAGAGATATGGT
TGCCTTGTTGCGCCTATTATTTTGAAAGATATCCCTGCCGTCGTTGCATA
TATCACTTGTTGTTGATCGTGGTGTCAATGCCTCGTTGCACATACCACCT
TACAAGGTATGAGAGTTACATTTACATTTTTTCTATATTTTTTCTTTACC
ATTCAGAGGCAACTACACAGGATTTATNGAAGGTGATAGAAATTTCAATG
CTAGCAGAAACTTAAATTCAAAGAAGAACAGCAAGGAACCTTTAACCTCA
GATCTTATTCTTATTCGTCATGCTAAAAGATTCCAATTTCCTAGTAACCT
TGGCACTTAACGTTACGTAGTTACAACATTTGCGTTGCGTCTTTTTTCTC
CTCGTGTTCAATGCAATATGATTCCAAAATTAAATTAAGATTTGTTCTTT
ATATCTTTACCACTCCAAGCTAAGACGAGAAATAGTGGAGAAGCGTGTTT
CTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTATCTCAGTTAGTCGTGTTCAATGCAATATGATTCCAAAATTA
AATTAAGATTTGTTCTTTATATCTTTACCACTCCAAGCTAAGACGAGAAA
TAGTGGAGAAGAAATTGAATGTTGACACGGGAAATTTCAAACTTCAACCT
CAAAAAAATCTTGCCACCACGTGCCTACAAAAGAATTTCATATCACAGTG
GAGCCAAGACACTCAAGTCTTGTGTATGCTGATTTCAGCTCTTCTGGGAA
CAGTTTCGGAAAGATATTTCCAATTGAAAATTTCGTGTCACTATAGCATT
TCGTCTGAATTTCTTGTCTAATAATGATTTTCTCACACCAGATTTCACAA
ATGTATCCAGCTTGGCATGCTAGCCTTACTTTCAAGCTTTTTTTCTGCAA
ATGTATAAAAGGAAAGAGCTAAGATAACTTTTTTGAATAAGACTAATAAG
CATTTTTTTTAAATCAGACACCTTCGAGCCGCCATGACAGTTGTCCTTTG
CGGACAAAGCTAGAACATCAATTGTTTTCTGAAACAATAGAAATACAATA
ATCGCTCTCCACTCCACCGTTTTATGAGTCGTTTATCCAGTGTATAATAA
AACTTTGTTATAAGTAACTCAAATTTTTGGGTCTGGGCTGAGGTTACTTA
GCATTCTAGCCACTGACCTTTATATACCAAGTTTCTCAATCCCGGCCGAG
CAAAATTTTTGATCGGAGTTTTTTGAAAAGTGGTACCCTAATGGCGGCAC
TACTCAATATCATTATAAATGTATCGAGAGCGCTAGATCTATGCTCCGTG
GGGAATACTTTTGATGATATAGCGCCGTTAGACGTTAATTTTGAGCACTG
CAATGGCTTCTTTACGGGTACCACTTCAAAAAAAACTCGATCAAAGATGA
CGGAAGTAATTTGGTCCAGGGATATATAAAGGTTAGTGATTCTAGCTCAT
TTTCTGAATAATTTCCCTTGACCAACCCTAAAATGATACCATATTTATGT
TTATTGGTTATAAGGGCTATAGTTGCAATGGTTAGGTTATGTTGAAAGTT
TTTGACTAAAATTTGACTAATTTCAGGGCCTTAGCAACCTGGTTGCTTAC
ATAAAAAGTGTTTACACATAAATAGTTATTTACAATCTCTCTATAGCACA
AACCACACGATTTGGAACTGACGTCATCAACAGTTATGCTGAACCAATCA
GTTGGGTCATGTTGGCTTTGTACCTTTTGATTGCTAATGTTCTTTTGTTG
AACCTGTTGATCGCTATCTTTGGGTACGTACATACAATAAAGCTAGTCGT
AGTTAGGCACCCCTGTCTCACAGCTCCGGTTTAACCTTTTACCACAGCTG
GGATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010737-exon-sc0000109-1575043694:165399..165468 | TCONS_00010737-exon-sc0000109-1575043694:165399..165468 | Clytia hemisphaerica | exon |
| TCONS_00010737-exon-sc0000109-1575043694:161712..161922 | TCONS_00010737-exon-sc0000109-1575043694:161712..161922 | Clytia hemisphaerica | exon |
| TCONS_00010737-exon-sc0000109-1510915933:165399..165468 | TCONS_00010737-exon-sc0000109-1510915933:165399..165468 | Clytia hemisphaerica | exon |
| TCONS_00010737-exon-sc0000109-1510915933:161712..161922 | TCONS_00010737-exon-sc0000109-1510915933:161712..161922 | Clytia hemisphaerica | exon |
| TCONS_00010737-exon-sc0000109-1491911889:165399..165468 | TCONS_00010737-exon-sc0000109-1491911889:165399..165468 | Clytia hemisphaerica | exon |
| TCONS_00010737-exon-sc0000109-1491911889:161712..161922 | TCONS_00010737-exon-sc0000109-1491911889:161712..161922 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109 | supercontig | sc0000109:161712..165468 - |
Blast
The following BLAST results are available for this feature:
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