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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010720 ID=TCONS_00010720|Name=TCONS_00010720|organism=Clytia hemisphaerica|type=transcript|length=407bp
acaaaacaataaaattcatGATCAAATGTTTTTCGTGTTCCTATATATGT
TTCGATGagAAAAACCACTTCTCAACTTACCCGGTAATCCAAAATTCTCA
TCCTACAAGAACGCCTTACAAGAATACTGTCAAAAGCGTAAAGCCCCAGT
TCCAAAGTACAATTCTACAAAGTCGTCCACAGGCTTTATTGGTAATGTCT
CTTTCCTCGATTTCAACTTTACCGCCGAAGCTGCTACAGACACTCCTAAA
GATGCAGACCTTAGNCGAAAAATGTGCAAATTCTAAACAAATAAAGCGCT
AGATCCAATCCTTTATTCTAAACgcagtactcttaggtgccaaataaacg
ccccccccgcttgttaatttttagatttttttccaacccccccggacctt
attagga Run BLAST on NCBI transcript from alignment at sc0000109:515359..516808+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010720 ID=TCONS_00010720|Name=TCONS_00010720|organism=Clytia hemisphaerica|type=transcript|length=1450bp|location=Sequence derived from alignment at sc0000109:515359..516808+ (Clytia hemisphaerica)
acaaaacaataaaattcatGATCAAATGTTTTTCGTGTTCCTATATATGT
TTCGATGaggtttgtattttattatGATTGTTGATCTGGGGTATTaagca
aaatgggtgccgggtatgtgcgagccataagggtccctggTCCTGTTGGA
TTAAGCGCTTTTCTATCAAACTTGAGAATTTCAGAGGCATGTATGATTCA
TCATAAATAAGGGGATTAGGAGGATACAAAATACCAGGAAGATTCCAATA
ATTTGTTCATGAAATACCCACCCACAAAGACATTTCAAATACCAGTCAAA
AAGTGCAAAACATTTCACATCGAGGTCTGGAATGTTGGCTTTTCAATGCC
GGAATACCGGTAAAGTCCCTCATGAAAGTGTCACTTGTCATGAAAGATAA
CAACATTATATTTTTAAATCCATGCTAGAACTCATGAAAACACTTAGTGC
ATTTAAACCACTATTTTGTCACCATGAATTAAAAAGGGTTGTAGTAAATT
GTAAGCTAACACTACCAGCGATACAGCCAATTCTTTAGTCATGTGTTCTT
TAGAGGCATTTATAGAAACTACCGTGTGAAGTTTTATATCTTGAAACCTT
AATGGCAGGTAATAAGTTGTTTGTCAGGTCCCAAAAGCAACTTAGTTTTG
TCATCTTTGTGTTAAAAGGGTTACTACAGTCTTAGGTAACGGCCTATAAT
GGATGAACACAATTTCAAATCTCATAATGGCCTCTACCTATTTAAGAAAG
ATGTTGAAATAAGCATGTATAAAGAAACTGGCTAAAAGTGGATGGGTTTT
TCTTTAGATTACTCCTTTTCAACNAATGTATAAAGAAACTGGCTAAAAAT
GGATGGGTTTTTCTTTAGATTACTCCTTTTCACCTCTCCTTTTCACCTTC
ACTTTGATTAGTCCTGTTATGGACTTTTTATTGCAAGGTTTTGGTAAAAC
AACGCTGTTGAAATAATCTTTTCagtgaattttaaaaaagaGGGGTCTTT
AGAGTCTAGCCCATTTCAGCAAGAGGGTTACTATTAACTAAGCCTATTTT
AGAAACACTGATTCAGAAACCCATGAAAATTCTTTGTTATAAATTTGTTT
AGAAAAACCACTTCTCAACTTACCCGGTAATCCAAAATTCTCATCCTACA
AGAACGCCTTACAAGAATACTGTCAAAAGCGTAAAGCCCCAGTTCCAAAG
TACAATTCTACAAAGTCGTCCACAGGCTTTATTGGTAATGTCTCTTTCCT
CGATTTCAACTTTACCGCCGAAGCTGCTACAGACACTCCTAAAGATGCAG
ACCTTAGNCGAAAAATGTGCAAATTCTAAACAAATAAAGCGCTAGATCCA
ATCCTTTATTCTAAACgcagtactcttaggtgccaaataaacgccccccc
cgcttgttaatttttagatttttttccaacccccccggaccttattagga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010720-exon-sc0000109-1491911889:515359..515417 | TCONS_00010720-exon-sc0000109-1491911889:515359..515417 | Clytia hemisphaerica | exon |
| TCONS_00010720-exon-sc0000109-1510915933:515359..515417 | TCONS_00010720-exon-sc0000109-1510915933:515359..515417 | Clytia hemisphaerica | exon |
| TCONS_00010720-exon-sc0000109-1575043694:515359..515417 | TCONS_00010720-exon-sc0000109-1575043694:515359..515417 | Clytia hemisphaerica | exon |
| TCONS_00010720-exon-sc0000109-1491911889:516461..516808 | TCONS_00010720-exon-sc0000109-1491911889:516461..516808 | Clytia hemisphaerica | exon |
| TCONS_00010720-exon-sc0000109-1510915933:516461..516808 | TCONS_00010720-exon-sc0000109-1510915933:516461..516808 | Clytia hemisphaerica | exon |
| TCONS_00010720-exon-sc0000109-1575043694:516461..516808 | TCONS_00010720-exon-sc0000109-1575043694:516461..516808 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109 | supercontig | sc0000109:515359..516808 + |
Blast
The following BLAST results are available for this feature:
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