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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010676 ID=TCONS_00010676|Name=TCONS_00010676|organism=Clytia hemisphaerica|type=transcript|length=2985bp
CGAATAGGGTGTCTATGTGATACCACAAGTTTGAGAGCTACAACGACAAG
GTAATAGTCTAATGTTTGACATTTGAGAGAGAAAAGAACAGAGGAAAGAA
GCATCAACCAATACTATGGGCTCCTGCTCACTTGCTATCTCAGCTGTACT
GGCATTGGTGCTCTGTCACGTGACACTATGCGAAGGAAGCACGTGCTTCA
AACATGTCTACCATCAACCATACTTCAAATGTCGACCAATCAGACATGGC
GTATGGAGATCTGTCGGCAATCTCCGATCAAAACTCTCTGAATCTCTCAA
AAACTGGAATCTCCGTTTGAAATTTAAGGAGCCTCTTGCATCAGATATTT
GGATGCATTACACTACCGGTTCTAAAAACACTAAAGGAAAAACCGAAGTC
GTTTTAAAACCATCATCTGGGAATGCCATATTGACCAATCGCCACGTCTT
CCAGTATTATGCATACTTCTTTCACCCCATTGGATGGAACGGTTTGGTGT
GCGCCGAACTTTGCGGCACCACGACCCACACAAACCGCCAGATTTGCACT
CAACAACCACAAAGCTGTTTGAACAATGTTCATTACCAGTTCTACCAGCA
ATGGTGGGATTGGTACTGGAGAATGTGGACATCACGTGCCCGAATCTCAC
CAAAAATCTCATCTCCTCTACGAAattggaaaatcaaaatggaGTTCAAG
AACAAACTATCAGCTAATATCGTTATGAAAAACGTTCGAGGACAATACAA
CACCAAGGGaaagaaaataatcattttGACGTCACAATATTCGAATCAAA
TCTTGAGCCCACATGCCAGCTTTAAGTATATGGTCTCGTTTCACCAACAG
CAATCCACAACTCATCTTCAATGTGTTGAATTTTGTGGCATTAAAGTAGA
TACGAATGAAGATATTTGTCAAAAGATCACAACAACTACCCTTGCaccaa
caactacaacaaccaccACTACTACACCAACAACGACTAGCTCTactaca
acgaccactccaACTACCCTTGCACCAACAACTACAACGACCACCACTAC
CCTACCAACAACGACTAGCTCCactacaacgaccactccaACTACTACGA
CAACGACCTCCCCACCaactacaacgaccacccctactACGACAACAACC
ATCCCACCTTCTACAACGACCATCTCTactacaacgaccacccctactAC
AACAACCACTACGACAACGGCCAGTCCtactacgacaacgaccaccccaa
CTACTACAACAACCACCCCAACTACTACAACAACCACCCCAACTACTACA
ACAACTACCCCTACTATAGCGAAACCAACAAAACCGAAACCTTGCATTCC
GAAATACAACTACACAGAAGTTATCGAAAAAAGTCTCCTTTTCTACGAAG
CTCAAAGATCAGGCAAGCTTCCAAAGGACCAACGCGTGAAGTGGCGAAAA
GATTCAACTCTCAATGATGGATCAACCAAAGGAATCGATTTAACCGGAGG
TTACTTTGATGGTGCTGTTTATGTTAAATTTGGATTCCCAATGGCTGCAA
CGGTCACAAATCTTGCATGGGGAATGTTGGAATTCAAGAAAGGTTACACT
ATATCAGGACAATTTGAATATGGATTGAAAGCCATAAAATGGGGAACTGA
TTACTTCATCAAATGTCATCCCTCACCCAATAAGTTATATGGACAAGTTG
GAGATAGTAGTATTGAAAGCTCATACTGGGGACGTCCTGAAGATATGAAG
CTTGTGCGTCCTGTGTATGAAATTGACGAAAACACACCTGGTTCTGATCT
AGCTGCGGAGACGTCTGCCGCTCTTGCTGCAAGCTCAATGGTTTTCCGTG
AAAAAGGTGATATGGTTTACGCACAAACATTACTTGACCATGCGGAAGAA
CTTTATGATTTTGCAATGAAATACCGTGGATTGTATCAAGATTCGATCAG
GGATGCGAAATACTTCTACAAAAGTACCTCGTATGACGATGAGCTAGCTT
GGGCTTCTTTATGGTTGTTCAAAGCGACaaaacaagggaaatatatCAAT
AACTTTTTAACAGAATTTTACAAAAAGGCGGGAAATGTGAAACCAGACCA
ATACTCTTGGGATGATAAATGGCTCGGAGTTCAAGTCCTAGCAAAACAAT
TGGTGATCCCACTGGCTACAAATTGGCTGGATTCTTTGAAATCTCTTCTG
AAAGAACCGAAGATGACACCCAAAGGACTGTTCTACGTCAACCAGGCTGG
TGCGTTAAGACACGCAGCCAATCTGGCATTTGTTGCGCGTGTTGCTGCAA
CTTTCTCGACAACATCTCAAGAAGACAAGGAATTCTTTAACAATTTCACA
CAATCACAAATTCACTACATTCTTGGTGATGCAGGACGCAGCTTCATTGT
CGGTTTTGGTAAAAATCCTCCACAAAGGCCTTTCCATAAAAGCAGTTCCT
GTCCCACAATTGGTCCATGTGGTTTTGCTCAACAAGATAGCTCAGCACCC
AATCCCCAAATTCTATACGGTGCATTAGTTGGTGGTCCAGATAAAAATGA
TCAATACACCGACAACCGGAAGGATTATATAAAGAATGAAGTGACCATCG
ACTTCAATGCAGGTCTCCAATCAGCACTTGCTGGTCTTCAACAACTGGCT
GATGAAGGACATTGCGGTGAATGTTGAAGACAATAaaaaactgtgaaaag
gaaTATTAGTGGAAAGTAGAGATCTTATTTTTGCAGGAATTAAGAAAGGA
CAAATTAGAGATAAGTGTAGAGTTATAATGGTGTCCGACTGCTGATATAA
CGatgttaaaattaataaaaaccaATATCTTAGGCTATGGAGTTCAGATT
CTTTGTACGCCTTCAGATAATTTTAGTTATATCTACTGAATACTTCATGA
TTTGTAAAATAAATTACTGAAATTTAAGTAAAGGTATATTTTACCGTAAT
TAGATTTAAAAGAATAGAGGATCgcaaatttgacc Run BLAST on NCBI protein sequence of TCONS_00010676-protein >TCONS_00010676-protein ID=TCONS_00010676-protein|Name=TCONS_00010676-protein|organism=Clytia hemisphaerica|type=polypeptide|length=853bp
MGSCSLAISAVLALVLCHVTLCEGSTCFKHVYHQPYFKCRPIRHGVWRSV
GNLRSKLSESLKNWNLRLKFKEPLASDIWMHYTTGSKNTKGKTEVVLKPS
SGNAILTNRHVFQYYAYFFHPIGWNGLVCAELCGTTTHTNRQICTQQPQS
CLNNVHYQFYQQWWDWYWRMWTSRARISPKISSPLRNWKIKMEFKNKLSA
NIVMKNVRGQYNTKGKKIIILTSQYSNQILSPHASFKYMVSFHQQQSTTH
LQCVEFCGIKVDTNEDICQKITTTTLAPTTTTTTTTTPTTTSSTTTTTPT
TLAPTTTTTTTTLPTTTSSTTTTTPTTTTTTSPPTTTTTPTTTTTIPPST
TTISTTTTTPTTTTTTTTASPTTTTTTPTTTTTTPTTTTTTPTTTTTTPT
IAKPTKPKPCIPKYNYTEVIEKSLLFYEAQRSGKLPKDQRVKWRKDSTLN
DGSTKGIDLTGGYFDGAVYVKFGFPMAATVTNLAWGMLEFKKGYTISGQF
EYGLKAIKWGTDYFIKCHPSPNKLYGQVGDSSIESSYWGRPEDMKLVRPV
YEIDENTPGSDLAAETSAALAASSMVFREKGDMVYAQTLLDHAEELYDFA
MKYRGLYQDSIRDAKYFYKSTSYDDELAWASLWLFKATKQGKYINNFLTE
FYKKAGNVKPDQYSWDDKWLGVQVLAKQLVIPLATNWLDSLKSLLKEPKM
TPKGLFYVNQAGALRHAANLAFVARVAATFSTTSQEDKEFFNNFTQSQIH
YILGDAGRSFIVGFGKNPPQRPFHKSSSCPTIGPCGFAQQDSSAPNPQIL
YGALVGGPDKNDQYTDNRKDYIKNEVTIDFNAGLQSALAGLQQLADEGHC
GEC Run BLAST on NCBI transcript from alignment at sc0000108:453798..456782 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010676 ID=TCONS_00010676|Name=TCONS_00010676|organism=Clytia hemisphaerica|type=transcript|length=2985bp|location=Sequence derived from alignment at sc0000108:453798..456782 (Clytia hemisphaerica)
ggtcaaatttgcGATCCTCTATTCTTTTAAATCTAATTACGGTAAAATAT
ACCTTTACTTAAATTTCAGTAATTTATTTTACAAATCATGAAGTATTCAG
TAGATATAACTAAAATTATCTGAAGGCGTACAAAGAATCTGAACTCCATA
GCCTAAGATATtggtttttattaattttaacatCGTTATATCAGCAGTCG
GACACCATTATAACTCTACACTTATCTCTAATTTGTCCTTTCTTAATTCC
TGCAAAAATAAGATCTCTACTTTCCACTAATAttccttttcacagttttt
TATTGTCTTCAACATTCACCGCAATGTCCTTCATCAGCCAGTTGTTGAAG
ACCAGCAAGTGCTGATTGGAGACCTGCATTGAAGTCGATGGTCACTTCAT
TCTTTATATAATCCTTCCGGTTGTCGGTGTATTGATCATTTTTATCTGGA
CCACCAACTAATGCACCGTATAGAATTTGGGGATTGGGTGCTGAGCTATC
TTGTTGAGCAAAACCACATGGACCAATTGTGGGACAGGAACTGCTTTTAT
GGAAAGGCCTTTGTGGAGGATTTTTACCAAAACCGACAATGAAGCTGCGT
CCTGCATCACCAAGAATGTAGTGAATTTGTGATTGTGTGAAATTGTTAAA
GAATTCCTTGTCTTCTTGAGATGTTGTCGAGAAAGTTGCAGCAACACGCG
CAACAAATGCCAGATTGGCTGCGTGTCTTAACGCACCAGCCTGGTTGACG
TAGAACAGTCCTTTGGGTGTCATCTTCGGTTCTTTCAGAAGAGATTTCAA
AGAATCCAGCCAATTTGTAGCCAGTGGGATCACCAATTGTTTTGCTAGGA
CTTGAACTCCGAGCCATTTATCATCCCAAGAGTATTGGTCTGGTTTCACA
TTTCCCGCCTTTTTGTAAAATTCTGTTAAAAAGTTATTGatatatttccc
ttgttttGTCGCTTTGAACAACCATAAAGAAGCCCAAGCTAGCTCATCGT
CATACGAGGTACTTTTGTAGAAGTATTTCGCATCCCTGATCGAATCTTGA
TACAATCCACGGTATTTCATTGCAAAATCATAAAGTTCTTCCGCATGGTC
AAGTAATGTTTGTGCGTAAACCATATCACCTTTTTCACGGAAAACCATTG
AGCTTGCAGCAAGAGCGGCAGACGTCTCCGCAGCTAGATCAGAACCAGGT
GTGTTTTCGTCAATTTCATACACAGGACGCACAAGCTTCATATCTTCAGG
ACGTCCCCAGTATGAGCTTTCAATACTACTATCTCCAACTTGTCCATATA
ACTTATTGGGTGAGGGATGACATTTGATGAAGTAATCAGTTCCCCATTTT
ATGGCTTTCAATCCATATTCAAATTGTCCTGATATAGTGTAACCTTTCTT
GAATTCCAACATTCCCCATGCAAGATTTGTGACCGTTGCAGCCATTGGGA
ATCCAAATTTAACATAAACAGCACCATCAAAGTAACCTCCGGTTAAATCG
ATTCCTTTGGTTGATCCATCATTGAGAGTTGAATCTTTTCGCCACTTCAC
GCGTTGGTCCTTTGGAAGCTTGCCTGATCTTTGAGCTTCGTAGAAAAGGA
GACTTTTTTCGATAACTTCTGTGTAGTTGTATTTCGGAATGCAAGGTTTC
GGTTTTGTTGGTTTCGCTATAGTAGGGGTAGTTGTTGTAGTAGTTGGGGT
GGTTGTTGTAGTAGTTGGGGTGGTTGTTGTAGTAGttggggtggtcgttg
tcgtagtaGGACTGGCCGTTGTCGTAGTGGTTGTTGTagtaggggtggtc
gttgtagtAGAGATGGTCGTTGTAGAAGGTGGGATGGTTGTTGTCGTagt
aggggtggtcgttgtagttGGTGGGGAGGTCGTTGTCGTAGTAGTtggag
tggtcgttgtagtGGAGCTAGTCGTTGTTGGTAGGGTAGTGGTGGTCGTT
GTAGTTGTTGGTGCAAGGGTAGTtggagtggtcgttgtagtAGAGCTAGT
CGTTGTTGGTGTAGTAGTggtggttgttgtagttgttggtGCAAGGGTAG
TTGTTGTGATCTTTTGACAAATATCTTCATTCGTATCTACTTTAATGCCA
CAAAATTCAACACATTGAAGATGAGTTGTGGATTGCTGTTGGTGAAACGA
GACCATATACTTAAAGCTGGCATGTGGGCTCAAGATTTGATTCGAATATT
GTGACGTCaaaatgattattttctttCCCTTGGTGTTGTATTGTCCTCGA
ACGTTTTTCATAACGATATTAGCTGATAGTTTGTTCTTGAACtccatttt
gattttccaatTTCGTAGAGGAGATGAGATTTTTGGTGAGATTCGGGCAC
GTGATGTCCACATTCTCCAGTACCAATCCCACCATTGCTGGTAGAACTGG
TAATGAACATTGTTCAAACAGCTTTGTGGTTGTTGAGTGCAAATCTGGCG
GTTTGTGTGGGTCGTGGTGCCGCAAAGTTCGGCGCACACCAAACCGTTCC
ATCCAATGGGGTGAAAGAAGTATGCATAATACTGGAAGACGTGGCGATTG
GTCAATATGGCATTCCCAGATGATGGTTTTAAAACGACTTCGGTTTTTCC
TTTAGTGTTTTTAGAACCGGTAGTGTAATGCATCCAAATATCTGATGCAA
GAGGCTCCTTAAATTTCAAACGGAGATTCCAGTTTTTGAGAGATTCAGAG
AGTTTTGATCGGAGATTGCCGACAGATCTCCATACGCCATGTCTGATTGG
TCGACATTTGAAGTATGGTTGATGGTAGACATGTTTGAAGCACGTGCTTC
CTTCGCATAGTGTCACGTGACAGAGCACCAATGCCAGTACAGCTGAGATA
GCAAGTGAGCAGGAGCCCATAGTATTGGTTGATGCTTCTTTCCTCTGTTC
TTTTCTCTCTCAAATGTCAAACATTAGACTATTACCTTGTCGTTGTAGCT
CTCAAACTTGTGGTATCACATAGACACCCTATTCG Coding sequence (CDS) from alignment at sc0000108:453798..456782 >TCONS_00010676 ID=TCONS_00010676|Name=TCONS_00010676|organism=Clytia hemisphaerica|type=CDS|length=2562bp|location=Sequence derived from alignment at sc0000108:453798..456782 (Clytia hemisphaerica)
TCAACATTCACCGCAATGTCCTTCATCAGCCAGTTGTTGAAGACCAGCAA
GTGCTGATTGGAGACCTGCATTGAAGTCGATGGTCACTTCATTCTTTATA
TAATCCTTCCGGTTGTCGGTGTATTGATCATTTTTATCTGGACCACCAAC
TAATGCACCGTATAGAATTTGGGGATTGGGTGCTGAGCTATCTTGTTGAG
CAAAACCACATGGACCAATTGTGGGACAGGAACTGCTTTTATGGAAAGGC
CTTTGTGGAGGATTTTTACCAAAACCGACAATGAAGCTGCGTCCTGCATC
ACCAAGAATGTAGTGAATTTGTGATTGTGTGAAATTGTTAAAGAATTCCT
TGTCTTCTTGAGATGTTGTCGAGAAAGTTGCAGCAACACGCGCAACAAAT
GCCAGATTGGCTGCGTGTCTTAACGCACCAGCCTGGTTGACGTAGAACAG
TCCTTTGGGTGTCATCTTCGGTTCTTTCAGAAGAGATTTCAAAGAATCCA
GCCAATTTGTAGCCAGTGGGATCACCAATTGTTTTGCTAGGACTTGAACT
CCGAGCCATTTATCATCCCAAGAGTATTGGTCTGGTTTCACATTTCCCGC
CTTTTTGTAAAATTCTGTTAAAAAGTTATTGatatatttcccttgttttG
TCGCTTTGAACAACCATAAAGAAGCCCAAGCTAGCTCATCGTCATACGAG
GTACTTTTGTAGAAGTATTTCGCATCCCTGATCGAATCTTGATACAATCC
ACGGTATTTCATTGCAAAATCATAAAGTTCTTCCGCATGGTCAAGTAATG
TTTGTGCGTAAACCATATCACCTTTTTCACGGAAAACCATTGAGCTTGCA
GCAAGAGCGGCAGACGTCTCCGCAGCTAGATCAGAACCAGGTGTGTTTTC
GTCAATTTCATACACAGGACGCACAAGCTTCATATCTTCAGGACGTCCCC
AGTATGAGCTTTCAATACTACTATCTCCAACTTGTCCATATAACTTATTG
GGTGAGGGATGACATTTGATGAAGTAATCAGTTCCCCATTTTATGGCTTT
CAATCCATATTCAAATTGTCCTGATATAGTGTAACCTTTCTTGAATTCCA
ACATTCCCCATGCAAGATTTGTGACCGTTGCAGCCATTGGGAATCCAAAT
TTAACATAAACAGCACCATCAAAGTAACCTCCGGTTAAATCGATTCCTTT
GGTTGATCCATCATTGAGAGTTGAATCTTTTCGCCACTTCACGCGTTGGT
CCTTTGGAAGCTTGCCTGATCTTTGAGCTTCGTAGAAAAGGAGACTTTTT
TCGATAACTTCTGTGTAGTTGTATTTCGGAATGCAAGGTTTCGGTTTTGT
TGGTTTCGCTATAGTAGGGGTAGTTGTTGTAGTAGTTGGGGTGGTTGTTG
TAGTAGTTGGGGTGGTTGTTGTAGTAGttggggtggtcgttgtcgtagta
GGACTGGCCGTTGTCGTAGTGGTTGTTGTagtaggggtggtcgttgtagt
AGAGATGGTCGTTGTAGAAGGTGGGATGGTTGTTGTCGTagtaggggtgg
tcgttgtagttGGTGGGGAGGTCGTTGTCGTAGTAGTtggagtggtcgtt
gtagtGGAGCTAGTCGTTGTTGGTAGGGTAGTGGTGGTCGTTGTAGTTGT
TGGTGCAAGGGTAGTtggagtggtcgttgtagtAGAGCTAGTCGTTGTTG
GTGTAGTAGTggtggttgttgtagttgttggtGCAAGGGTAGTTGTTGTG
ATCTTTTGACAAATATCTTCATTCGTATCTACTTTAATGCCACAAAATTC
AACACATTGAAGATGAGTTGTGGATTGCTGTTGGTGAAACGAGACCATAT
ACTTAAAGCTGGCATGTGGGCTCAAGATTTGATTCGAATATTGTGACGTC
aaaatgattattttctttCCCTTGGTGTTGTATTGTCCTCGAACGTTTTT
CATAACGATATTAGCTGATAGTTTGTTCTTGAACtccattttgattttcc
aatTTCGTAGAGGAGATGAGATTTTTGGTGAGATTCGGGCACGTGATGTC
CACATTCTCCAGTACCAATCCCACCATTGCTGGTAGAACTGGTAATGAAC
ATTGTTCAAACAGCTTTGTGGTTGTTGAGTGCAAATCTGGCGGTTTGTGT
GGGTCGTGGTGCCGCAAAGTTCGGCGCACACCAAACCGTTCCATCCAATG
GGGTGAAAGAAGTATGCATAATACTGGAAGACGTGGCGATTGGTCAATAT
GGCATTCCCAGATGATGGTTTTAAAACGACTTCGGTTTTTCCTTTAGTGT
TTTTAGAACCGGTAGTGTAATGCATCCAAATATCTGATGCAAGAGGCTCC
TTAAATTTCAAACGGAGATTCCAGTTTTTGAGAGATTCAGAGAGTTTTGA
TCGGAGATTGCCGACAGATCTCCATACGCCATGTCTGATTGGTCGACATT
TGAAGTATGGTTGATGGTAGACATGTTTGAAGCACGTGCTTCCTTCGCAT
AGTGTCACGTGACAGAGCACCAATGCCAGTACAGCTGAGATAGCAAGTGA
GCAGGAGCCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010676-exon-sc0000108-1491911889:453798..456782 | TCONS_00010676-exon-sc0000108-1491911889:453798..456782 | Clytia hemisphaerica | exon |
| TCONS_00010676-exon-sc0000108-1510915933:453798..456782 | TCONS_00010676-exon-sc0000108-1510915933:453798..456782 | Clytia hemisphaerica | exon |
| TCONS_00010676-exon-sc0000108-1575043694:453798..456782 | TCONS_00010676-exon-sc0000108-1575043694:453798..456782 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108 | supercontig | sc0000108:453798..456782 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0005975 |
carbohydrate metabolic process |
| molecular_function |
GO:0003824 |
catalytic activity |
| molecular_function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
Blast
The following BLAST results are available for this feature:
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