TCONS_00010663 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010663
Unique NameTCONS_00010663
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length172

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010663 ID=TCONS_00010663|Name=TCONS_00010663|organism=Clytia hemisphaerica|type=transcript|length=172bp
ATCCAGAGAAATAATATATGATAGATTGGTGATAACACTGTCTATTACAT
AATGCGTAAGACCTGTTAGAGTTTCGATTGGGAGGAAAGAAGCTTCAGCA
GATGCTACCTTCTGCGAATAGTCGTTGAGAAGATCTCGTACAACTTCAGC
ATCTTCAGTACACACATCACAA
Run BLAST on NCBI

transcript from alignment at sc0000108:39984..40155

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010663 ID=TCONS_00010663|Name=TCONS_00010663|organism=Clytia hemisphaerica|type=transcript|length=172bp|location=Sequence derived from alignment at sc0000108:39984..40155 (Clytia hemisphaerica)
TTGTGATGTGTGTACTGAAGATGCTGAAGTTGTACGAGATCTTCTCAACG
ACTATTCGCAGAAGGTAGCATCTGCTGAAGCTTCTTTCCTCCCAATCGAA
ACTCTAACAGGTCTTACGCATTATGTAATAGACAGTGTTATCACCAATCT
ATCATATATTATTTCTCTGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005975XLOC_005975Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010663-exon-sc0000108-1491911889:39984..40155TCONS_00010663-exon-sc0000108-1491911889:39984..40155Clytia hemisphaericaexon
TCONS_00010663-exon-sc0000108-1510915933:39984..40155TCONS_00010663-exon-sc0000108-1510915933:39984..40155Clytia hemisphaericaexon
TCONS_00010663-exon-sc0000108-1575043694:39984..40155TCONS_00010663-exon-sc0000108-1575043694:39984..40155Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000108supercontigsc0000108:39984..40155 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010663 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top