TCONS_00010649 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010649
Unique NameTCONS_00010649
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2123

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010649 ID=TCONS_00010649|Name=TCONS_00010649|organism=Clytia hemisphaerica|type=transcript|length=2123bp
GTTCATTGGAAAGGTATTTAGTAATTAATTTTCGGAGGTATTTAAAGAGC
TGTTAATCGTATTCACGGCAAAGGAAATCATTTTATCGAAATTGAAAGAG
ATTATAGTTAACGTCTAAGTCATAGAACTTTAGTTGAAATTGGGAATTCA
GAAAATACTGCTCTCGATTAATTGTGATTTTCGTCAAGCAGGAAAGGATG
AAGCACTATAAATTGTTCTGCTTTTTCGTTCTTATCGCTATCAGTGTGAG
GTCGTCTTCAAGCAAGGCAATCAAAGGTGAAAATATTTATCATGGGGAGA
AAATAGTTGAGCCGCCATTCGGCAATGAAATTcaggaagaaaagaagaaa
ccaCCGATTGAAAGAAACGAAAAATCACCGGAAAAGACGAAGAATCCGGA
TAACGAGGAAAGCGGAAACAACCCAAAAGATGAAAAGGAGAAGGTTACCA
TAGACATGTTAAGAAAACATTGTTCTAACCCTACCGCCATCATGGATTAC
ATTATGTGTGATAATTTTTTTCCAGCCAATATAAGAAACCGGGATAGAGT
GAAAGGTAAAAATCATTACGAAATCGTGAACGGAGATTTGATTCTGGACA
CTCGATACATCGAATTTCATCCACACCATCGAAGCAGACGTGTAGCGGTC
GATAAACGGTGGCCAACAAAGGCTGATGGAACTGTTGAAATACCTTATCA
ATATGGAACTTCTTATTCTGATGTGCGAAATATGTTTGCGCAAGCTATTC
AAGATTATAACCGATTCACGTGTATACGATTCGTACCACGAAAGACCACT
GATGTCAATTACATCGATGTTATAAGTGATAGTGGTTGTTACACGTATCT
TGGTATGTATGGTGGGCGTCAAGTTTTGTCCTTGCAAACGAACTCATATT
GTACATCACTCAAAGGTGTGGCTATCCACGAAGCAATGCATGTATTAGGA
TTTCTTCACACTCAAGCAAGACGTGATCGTGATAATTATATCACAGTTCA
TTTCGATAAAATCCCAAGTTACCTACATCGACAATACAACGAGCATGCGT
ATGGTGAAGCACATGTTTATGGTGTCTCTTATGATAAACAATCTGTCATG
CATTATGGAAGATCAGCCGGTATCACTTCAAATGCTGACCCCAATGAAGA
GCTTGGACAACGAAATGGTTTCTCCCAGAAAGACCTCCTTCAAATCAATC
GAATGTATTGCCTTCATCTTGTCAACCAAGTCTGAAaggaaacaaagaaa
tttttatctaAAGACATCACTGTTAATAGCACATTTGGCAAATTTGTTAA
ATTTTAAGAGTTTTTTAGAATACTGTAGTTCTTAGCCtccaaaaattttc
ttgctttactttaaaaatttaagaatcaatataataagaatattttatta
accctttaagcACCAATGTTGAATATATtggacatgggctatataggagg
gcaaagccctcctgtaatgcccagctTGAGTTAGGAAGCGAGATGATAAg
ccaaaaaagtaaaaaaaaaatgcaaaaatttgacaaaaatccactttttt
gagattttgacccTTTTTGGTTAACGGGTCATcaaagaacctccaaattt
tgcCCTGTTTTACTTCATTCTGTCCTCTAGCGAATAgctttgaagtttta
ccactgggcacctttctgtCATTCAGTGAGGTCATCCGGAATCGTGCTGG
ACTGCTTAATTCCCCTAAACTACCCCCCTTAGCCAACGTGCACTCCGCCC
ACCCCAACCTTTCTGACGGCacctaaaagaaagaggagactatAAGCTAT
CCAATGAGCTATGAACGAACTCCTAACTCTTTCTAGATctggagatataa
gcctttaaagtttgaactagcgatttccTTAAAAAACTTAGAAGAAAAAC
GACTTAACGgacacttaaagggttaaagagacaaaaaatattgagaaaaa
gaCAAATTTGTCATATCTCGCCGAAAAAGAGTCTCAAAATTaattatttg
taaatttttgattttcccaTTGTTGTAATCTAACACTATAAGAActtatt
tgtaaattttctacataaagacacttcattattttgatttaaaaaatttc
acagAAAATTAACTCACTTTACC
Run BLAST on NCBI

protein sequence of TCONS_00010649-protein

>TCONS_00010649-protein ID=TCONS_00010649-protein|Name=TCONS_00010649-protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
MKHYKLFCFFVLIAISVRSSSSKAIKGENIYHGEKIVEPPFGNEIQEEKK
KPPIERNEKSPEKTKNPDNEESGNNPKDEKEKVTIDMLRKHCSNPTAIMD
YIMCDNFFPANIRNRDRVKGKNHYEIVNGDLILDTRYIEFHPHHRSRRVA
VDKRWPTKADGTVEIPYQYGTSYSDVRNMFAQAIQDYNRFTCIRFVPRKT
TDVNYIDVISDSGCYTYLGMYGGRQVLSLQTNSYCTSLKGVAIHEAMHVL
GFLHTQARRDRDNYITVHFDKIPSYLHRQYNEHAYGEAHVYGVSYDKQSV
MHYGRSAGITSNADPNEELGQRNGFSQKDLLQINRMYCLHLVNQV
Run BLAST on NCBI

transcript from alignment at sc0000108:281385..288757-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010649 ID=TCONS_00010649|Name=TCONS_00010649|organism=Clytia hemisphaerica|type=transcript|length=7373bp|location=Sequence derived from alignment at sc0000108:281385..288757- (Clytia hemisphaerica)
GTTCATTGGAAAGGTATTTAGTAATTAATTTTCGGAGGTATTTAAAGAGC
TGTTAATCGTATTCACGGCAAAGGAAATCATTTTATCGAAATTGAAAGAG
ATTATAGTTAACGTCTAAGTCATAGAACTTTAGTTGAAATTGGGAATTCA
GAAAATACTGCTCTCGATTAATTGTGATTTTCGTCAAGCAGGAAAGGATG
AAGCACTATAAATTGTTCTGCTTTTTCGGTACGTAAGTTTGATACTGTAA
AGTAGCTACGATTAAGTCTTTATAACTCGAACCCACACGGGGAACGCATA
AATTTCTTCGAGTATTACGGGAATTTAATTTATGGAATAAGGCTTTAAAG
GCATTGTTAACTGAAGGAAAACTTGTTCCAGTTAGACATTCGAGTCAGAG
AGGTTCGGGTTAAAAAAGACTCTTTTGTATTACTATTATTGCTATTCATT
CTCTGTGCGCTGTTATTCGAATATTGAGTAAATTTTTCGAAATTTGACGA
AAAATTGTAACTTCAACCCGGTGTTTGAATGCACGCGGGTTGTACAGCTA
ATGTTGGATAAAATTGGCTTCAAATTCCAAATCGGAGATTCTATTTTGGT
TTTTAGGCTTAAACGAAACAGCAAGTAATAATCACGAGAGAAAATTTACA
GTTTTTATTGAGAATCTTAAAAAGCCACTGGTGTTCGAAGAAAAAATTTG
CTCATTTATTTGGTCATGGTTTCAAGTCAAGTAGACACATGTAAAATTTG
ACTTAGCTCAGCTTTTAATTTTTTTGCTTTATCTTTTCTAGTTCTTATCG
CTATCAGTGTGAGGTCGTCTTCAAGCAAGGCAATCAAAGGTGAAAATATT
TATCATGGGGAGAAAATAGTTGAGCCGCCATTCGGCAATGAAATTCAGGA
AGAAAAGAAGAAACCACCGATTGAAAGAAACGAAAAATCACCGGAAAAGA
CGAAGAATCCGGATAACGAGGAAAGCGGAAACAACCCAAAAGATGAAAAG
GAGAAGGTTACCATAGACATGTTAAGAAAACATTGTTCTAACCCTACCGC
CATCATGGATTACATTATGTGTGATAATTTTTTTCCAGCCAATATAAGAA
ACCGGGATAGAGTGAAAGGTAGGCTACCGTGAACTTTTTTAACCTTTTTA
AAAGACGCCCTTTTTTATTGACAATTCTTACCGCCCTTTTTGAATAAAGC
CAGAAGGCTGTTAGAGCTCAATCAGAAATAATGAAGAAAATAGATACATT
GAGTATTGCTATAGCTATAGTGTCCATAACCCATAAAAAGATTTATTTTT
CGAAAGTAAGAACATTTGAAGCTTTGCAGACACTAAAACACCCGATGTCT
TAAAAAAATGGCCAAAACGGTCACAAAATGGCGAAAATAAGAACATTTTT
AGGCTTAAAACTCAAAAAGTTAAGGACAGCCGAAGATTTCAAAAATTTTA
AATGTTCTTATAAAAAATATACACGGTTGGAAAAACAACCCAAAAAGCAC
CTACGCCACCCTCTCCAACGTGAAATATTTTTTTCAAACACATAAATCAC
GTATTGTATCCTTAATTACAACAGTTCGCCTACAGAAAAACATCTAAACG
CCAAACACAAAATAATTACAGTAAATACCGCTTACCACAAAATAGATTGA
CCTTTTGTATTGTCTACGATTAGAAGTTCATAAAGAAGTTGTTTTTCTAT
AACGATTCCCTTGTGGTATTCTAAATTTACTGGTTCTGTTAATTGTTTAA
AAGCCGAAAAATGTTAGTAGATCTAAAAATAGAAGGTCAGGGTCAGATTC
CCTGACCTTTATATACCCTGGACCAAGTTTCTCAATCCCGGCCAAGCAAA
ACCTGTGAGGTTTTTTGGAAAGTGGTATGTACCCTAATGGCGGCACAATA
GCGGTGTAAATACATCGAGAGCGCTAGGTGTACTTTCTCTCAAATACTGT
TGATGATGTAGCGCCGTTAGACGTTAATTTTTAACATTGCAATGGCTTCT
TCTCGGGTACCAATTCCAAAACAACTCCAATCAAAGATGGCGGATATAGC
TTGGTCCAGGGATATATAAAAGGTCAGTGGTTAGATCCATTTCATCATGA
TTTTATGTGGCGTCTATCAAGAAAAACAACTAGTGTTGAAATGGTCTTCG
CTTTTTGTAAAGAGTGTAACAGTGATCAATGAAGCGGATAGCGTCTCTAA
AGAAGAAAAATAATTACATAAATCAAAATCATTTAACAAGAATCTGTCTG
AGTTTGCTTGGAAAATTTTTTAAATTATAATGGAGAAATTTAGCCATTTC
TACAATCAGTGCCATAACATATTGGCAAATTTAGCTAATTTACAGCTAAT
TTACCATTTTTCGAAAATTGAAGTTCGAGCGAGAATGTCAATTTCGGGCC
TTCAACTTGATTTCATCGATTATTTAGATCTGGGAGGGATTTATTGGTTT
CTAGGCTATATTTCAAGCCCTACTGAACCATTTTTGAACTTTTGGATCCC
CAGATCTTAAGTCTAGCGTTAAAACTCAGAGTTAAAACTCTACCCTTCGA
ACCTACTTTAGAGCACTCACAAATCGATTGTGGTTTCAAAACTTCCCGGT
GGATTTCCCTTTTGTGCCAAGTACTTCGTCGCCGATTGTAAATGCTCCAC
GGCAACCCTCATGCAAGTCCTTATGCCAAGTCCTTTTCACGAAAGTTACC
AAAATTGGTTCACGCACCACGCAAAAAAACAACGAAAATAGCCCAAATCA
CGCATCACGCAAAAAGTATCACGCAAACACCTTGGGGCTTCTTTATAAAA
CAGACTTGAGTGAATCCAACTACATAACCACAAATTCATTATAGGTAAAA
ATCATTACGAAATCGTGAACGGAGATTTGATTCTGGACACTCGATACATC
GAATTTCATCCACACCATCGAAGCAGACGTGTAGCGGTCGATAAACGGTG
GCCAACAAAGGCTGATGGAACTGTTGAAATACCTTATCAATATGGAACTT
CTTATTCTGATGGTAAGTTAATTTTCAAGACCTGTCTGGTCTGTAAAATG
TTAAGCTTCAGCTTATTGATGGCACTGTTGACATGCCTTACAAATATGGG
GAACTTCTTATTCTAATGGTAAGTTAATTTTCAAGACCTGTCTGGTCTGT
AAAATGTTAAGCTTCAACTTATTGATGGCACTGTTGAAATACCCTACCAA
TATGGAACCTCTTCTGATTCTGATGGCAGGTGAAATTTTCAAGACCTTGT
CTCGGTCTGTAAAACGCTAAGTTTAAATTATTGTCAATCCATAGTGTGTA
ATAGGTAATGGGTTTATGCAACCTTTAACTTTTAATCTTTTTACAGCCTT
TACCGATGGCAGTATTTGAGCCTACGGAGTAGTGACGATGCATATTGTGA
AGCTGGAGTGTAAATGTCGAAATTGTCTTACTCTTGATTACTTATAGTGC
GAAATATGTTTGCGCAAGCTATTCAAGATTATAACCGATTCACGTGTATA
CGATTCGTACCACGAAAGACCACTGATGTCAATTACATCGATGTTATAAG
TGATAGTGGGTGAGTATAGATGATTTCTTAAACACTCTGAGTAAGAAAAG
GCTGGCTCGATGCTCTTAGAGGGATGGTTTTAGCTTCTGCTGTGTATTTA
ACATAAAATGCACCTTGAATCCTTAGATAACTCTTAATTTCTTTCGAAGA
ATTCCGGTGATAAACTTCTCTAAGAATTTCGTTCGAATTTGAATTAGAGA
GAGTATTTTATACGAGTTTCCAGCTCAGGAGACCATAATGTTTTAGTTCA
ACTTATAGATAAATTTGAATGAAAGAGAATCGATTGTAAAACACAACTCA
GCTGGCATACAGCGTAGTTTTAAACCATGGTTCCGTTTCGCTCCGAAACG
AAATGAAGCCGTTCTTTGGTCACATTCAAGTGTTACGTCACTTCTAACCA
ATAGAATGGCTTCATTTCGTTTCGGAGCCGTCACGTGCGAACATGGTCTT
ATAATTCATATTTAGGGACGTCAAATGTACGTTGTAATGACGTTCTGAGC
CATTATTTCCATATATTTAGTTGTTACACGTATCTTGGTATGTATGGTGG
GCGTCAAGTTTTGTCCTTGCAAACGAACTCATATTGTACATCACTCAAAG
GTGTGGCTATCCACGAAGCAATGCATGTATTAGGATTTCTTCACACTCAA
GCAAGACGTGATCGTGATAATTATATCACAGTTCATTTCGATAAAATCCC
AAGTTGTAAGTTACTTACTACAGTAGACTCAAAGGCCCTCTCGCTCTTTG
ACTCAAATCTCATCTTACTCAAGCACCACGACAACATACAAAAAAGATGC
TGCAAGTGTCTTCATTAGGAAAGTTTTACCAGGCATGAAAAAGTTTTTAG
CCGTCCTACGGTACACACTTCCTCTTTTTCTATGGGACACCCTGTAATTA
TATTCTTTTTCTATGGGACACCCTGTAATTATATTCTTTTTCTATGGGAC
ACCCTGTAATTATATACTTTTTCTATGGGACACCCTGTACTTATATACTT
TTTCTATGGAACACACTGTAATTTTATCCTTTTTCTATGGGACACCCTGT
AATTATATCCTTTTTCTATGGGACACCCTGTAATTATATCCTTTTTCTAT
AGTACACCCTGTAATTATAAACTTTTTCTATGGGAAACCCTGTATTTATA
TTCTTTTTCTATGGGACACCCTGTAATTATATTCTTTTTCAATGGGACAC
CCTGTAATTATATCCTTTATGGGACACCCTGTAATTATATTCTTTATGGG
AGACCCTGTAATTATATCCTTTTTCTATGGGACACCCTGTAATTATATTA
TTTATCAATGGGACACCCTGTAATTATATACTTTTTCTATGGGACACCCT
GTACTTATATACTTTTTCTATGGGACACCCTGTAATTATATCCTTTTTCT
ATGGGACACCCTGTAATTATAAATTTTTTCTCTGGAACACCCTGTAATTA
TATTCTTTTTCTACGGGACACCCTGTAATTATATACTTTTTCTATGGGAC
ACCCTGTACTTATATACTTTTTCTATGGGACACCCTGTAATTATATACTT
TTTCTATGGGACACCCTGTAATTATATTCTTTTTCTACGGGACACCCTGT
AATTATGTATTTTTTCTCTGGGACACCCTGTAATTATAAACTTTTTCTAT
GGGACACCCTGTAATTATATATTTTTTCTATGGGACACCCTGTAATCATA
TTCTTTTTCTATGGGACACCCTGTAATTATAAACTTTTTCTATGGGACAC
CCTGTAATTATATCCTTTTTCTATGGGACACCCTGTAATTATATCCTTTT
TCTATGGGACACCCTGTAATTATATATTTTTTCTATGGGACACCCTGTAA
TTATATGCTTTTTCTATGGGACACCCTGTAATTATATGCTTTTTCTATGG
GACACCCTGTAATTATATATTTTTTCTATGAGACACCCTGTAATCATATT
CTTTTTCTATGGGACACCCTGTAATTATATCCTTTTTCTATGGGACACCC
TGTAATTATATTCTTTTTCTATGGGACACCCTGTAATTATATTATTTTTC
TACGGGACACCCTGTAATTATATTCTTTTTCTACGGGACACCCTGTAATT
ATATTCTTTTTCTATGGGACACCCTGTAATTATATCCTTTTTCTACGGAA
CACCCTGTAATTATATTCTTTTTCTATGGGACACCCTGTAATTATATCCT
TTTTCTATGGAACACCCTGTAATTATAAATTTTTTCTCTGGAACACCCTG
TAATTATAAACTTTTTCTATGGGACACCCTAATTATATATTTTTACTTTG
ACACACAGACCTACATCGACAATACAACGAGCATGCGTATGGTGAAGCAC
ATGTTTATGGTGTCTCTTATGATAAACAATCTGTCATGCATTATGGAAGG
TAAAATCTTCCTCATATTCCACCAACTAGAAGCCTTCTGGGAGTGTGATT
AGCCAAACTTGAGGATTATTTATCATATTAATCAATCAAAAAGGTTTATA
AAATTTGCCTGTATTTTTAATCGAACCATCAATGGTCGATATATACCAAC
TTTTTAGGAGACAGAATTTGAGCCCTATCATTTTCGGGGGGACGGGGGAG
ACCGCTCAGCTGGCGATTATGACGTTATATGGACGTTGTGAACGTTAAAT
AAACGTTGAAACAACGTTGTGTGCCAGCTGGGCGGGATGACCGAATAAAA
TGAAGCCTGCTTATTGCGTAGGTTAAAAAGAATTGTCTTACAGAGACCTC
TGGGCAGTCAGTTTTCAATGACAGCCAATGAAATTTCAAAATTTTTGTTT
GATTTTCACAGATCAGCCGGTATCACTTCAAATGCTGACCCCAATGAAGA
GCTTGGACAACGAAATGGTTTCTCCCAGAAAGACCTCCTTCAAATCAATC
GAATGTATTGCCTTCATCTTGTCAACCAAGTCTGAAAGGAAACAAAGAAA
TTTTTATCTAAAGACATCACTGTTAATAGCACATTTGGCAAATTTGTTAA
ATTTTAAGAGTTTTTTAGAATACTGTAGTTCTTAGCCTCCAAAAATTTTC
TTGCTTTACTTTAAAAATTTAAGAATCAATATAATAAGAATATTTTATTA
ACCCTTTAAGCACCAATGTTGAATATATTGGACATGGGCTATATAGGAGG
GCAAAGCCCTCCTGTAATGCCCAGCTTGAGTTAGGAAGCGAGATGATAAG
CCAAAAAAGTAAAAAAAAAATGCAAAAATTTGACAAAAATCCACTTTTTT
GAGATTTTGACCCTTTTTGGTTAACGGGTCATCAAAGAACCTCCAAATTT
TGCCCTGTTTTACTTCATTCTGTCCTCTAGCGAATAGCTTTGAAGTTTTA
CCACTGGGCACCTTTCTGTCATTCAGTGAGGTCATCCGGAATCGTGCTGG
ACTGCTTAATTCCCCTAAACTACCCCCCTTAGCCAACGTGCACTCCGCCC
ACCCCAACCTTTCTGACGGCACCTAAAAGAAAGAGGAGACTATAAGCTAT
CCAATGAGCTATGAACGAACTCCTAACTCTTTCTAGATCTGGAGATATAA
GCCTTTAAAGTTTGAACTAGCGATTTCCTTAAAAAACTTAGAAGAAAAAC
GACTTAACGGACACTTAAAGGGTTAAAGAGACAAAAAATATTGAGAAAAA
GACAAATTTGTCATATCTCGCCGAAAAAGAGTCTCAAAATTAATTATTTG
TAAATTTTTGATTTTCCCATTGTTGTAATCTAACACTATAAGAACTTATT
TGTAAATTTTCTACATAAAGACACTTCATTATTTTGATTTAAAAAATTTC
ACAGAAAATTAACTCACTTTACC

Coding sequence (CDS) from alignment at sc0000108:281385..288757-

>TCONS_00010649 ID=TCONS_00010649|Name=TCONS_00010649|organism=Clytia hemisphaerica|type=CDS|length=7266bp|location=Sequence derived from alignment at sc0000108:281385..288757- (Clytia hemisphaerica)
ATCAGCCGGTATCACTTCAAATGCTGACCCCAATGAAGAGCTTGGACAAC
GAAATGGTTTCTCCCAGAAAGACCTCCTTCAAATCAATCGAATGTATTGC
CTTCATCTTGTCAACCAAGTCTGAACCTACATCGACAATACAACGAGCAT
GCGTATGGTGAAGCACATGTTTATGGTGTCTCTTATGATAAACAATCTGT
CATGCATTATGGAAGTTGTTACACGTATCTTGGTATGTATGGTGGGCGTC
AAGTTTTGTCCTTGCAAACGAACTCATATTGTACATCACTCAAAGGTGTG
GCTATCCACGAAGCAATGCATGTATTAGGATTTCTTCACACTCAAGCAAG
ACGTGATCGTGATAATTATATCACAGTTCATTTCGATAAAATCCCAAGTT
TGCGAAATATGTTTGCGCAAGCTATTCAAGATTATAACCGATTCACGTGT
ATACGATTCGTACCACGAAAGACCACTGATGTCAATTACATCGATGTTAT
AAGTGATAGTGGGTAAAAATCATTACGAAATCGTGAACGGAGATTTGATT
CTGGACACTCGATACATCGAATTTCATCCACACCATCGAAGCAGACGTGT
AGCGGTCGATAAACGGTGGCCAACAAAGGCTGATGGAACTGTTGAAATAC
CTTATCAATATGGAACTTCTTATTCTGATGTTCTTATCGCTATCAGTGTG
AGGTCGTCTTCAAGCAAGGCAATCAAAGGTGAAAATATTTATCATGGGGA
GAAAATAGTTGAGCCGCCATTCGGCAATGAAATTCAGGAAGAAAAGAAGA
AACCACCGATTGAAAGAAACGAAAAATCACCGGAAAAGACGAAGAATCCG
GATAACGAGGAAAGCGGAAACAACCCAAAAGATGAAAAGGAGAAGGTTAC
CATAGACATGTTAAGAAAACATTGTTCTAACCCTACCGCCATCATGGATT
ACATTATGTGTGATAATTTTTTTCCAGCCAATATAAGAAACCGGGATAGA
GTGAAAGATGAAGCACTATAAATTGTTCTGCTTTTTCGATCAGCCGGTAT
CACTTCAAATGCTGACCCCAATGAAGAGCTTGGACAACGAAATGGTTTCT
CCCAGAAAGACCTCCTTCAAATCAATCGAATGTATTGCCTTCATCTTGTC
AACCAAGTCTGAACCTACATCGACAATACAACGAGCATGCGTATGGTGAA
GCACATGTTTATGGTGTCTCTTATGATAAACAATCTGTCATGCATTATGG
AAGTTGTTACACGTATCTTGGTATGTATGGTGGGCGTCAAGTTTTGTCCT
TGCAAACGAACTCATATTGTACATCACTCAAAGGTGTGGCTATCCACGAA
GCAATGCATGTATTAGGATTTCTTCACACTCAAGCAAGACGTGATCGTGA
TAATTATATCACAGTTCATTTCGATAAAATCCCAAGTTTGCGAAATATGT
TTGCGCAAGCTATTCAAGATTATAACCGATTCACGTGTATACGATTCGTA
CCACGAAAGACCACTGATGTCAATTACATCGATGTTATAAGTGATAGTGG
GTAAAAATCATTACGAAATCGTGAACGGAGATTTGATTCTGGACACTCGA
TACATCGAATTTCATCCACACCATCGAAGCAGACGTGTAGCGGTCGATAA
ACGGTGGCCAACAAAGGCTGATGGAACTGTTGAAATACCTTATCAATATG
GAACTTCTTATTCTGATGTTCTTATCGCTATCAGTGTGAGGTCGTCTTCA
AGCAAGGCAATCAAAGGTGAAAATATTTATCATGGGGAGAAAATAGTTGA
GCCGCCATTCGGCAATGAAATTCAGGAAGAAAAGAAGAAACCACCGATTG
AAAGAAACGAAAAATCACCGGAAAAGACGAAGAATCCGGATAACGAGGAA
AGCGGAAACAACCCAAAAGATGAAAAGGAGAAGGTTACCATAGACATGTT
AAGAAAACATTGTTCTAACCCTACCGCCATCATGGATTACATTATGTGTG
ATAATTTTTTTCCAGCCAATATAAGAAACCGGGATAGAGTGAAAGATGAA
GCACTATAAATTGTTCTGCTTTTTCGATCAGCCGGTATCACTTCAAATGC
TGACCCCAATGAAGAGCTTGGACAACGAAATGGTTTCTCCCAGAAAGACC
TCCTTCAAATCAATCGAATGTATTGCCTTCATCTTGTCAACCAAGTCTGA
ACCTACATCGACAATACAACGAGCATGCGTATGGTGAAGCACATGTTTAT
GGTGTCTCTTATGATAAACAATCTGTCATGCATTATGGAAGTTGTTACAC
GTATCTTGGTATGTATGGTGGGCGTCAAGTTTTGTCCTTGCAAACGAACT
CATATTGTACATCACTCAAAGGTGTGGCTATCCACGAAGCAATGCATGTA
TTAGGATTTCTTCACACTCAAGCAAGACGTGATCGTGATAATTATATCAC
AGTTCATTTCGATAAAATCCCAAGTTTGCGAAATATGTTTGCGCAAGCTA
TTCAAGATTATAACCGATTCACGTGTATACGATTCGTACCACGAAAGACC
ACTGATGTCAATTACATCGATGTTATAAGTGATAGTGGGTAAAAATCATT
ACGAAATCGTGAACGGAGATTTGATTCTGGACACTCGATACATCGAATTT
CATCCACACCATCGAAGCAGACGTGTAGCGGTCGATAAACGGTGGCCAAC
AAAGGCTGATGGAACTGTTGAAATACCTTATCAATATGGAACTTCTTATT
CTGATGTTCTTATCGCTATCAGTGTGAGGTCGTCTTCAAGCAAGGCAATC
AAAGGTGAAAATATTTATCATGGGGAGAAAATAGTTGAGCCGCCATTCGG
CAATGAAATTCAGGAAGAAAAGAAGAAACCACCGATTGAAAGAAACGAAA
AATCACCGGAAAAGACGAAGAATCCGGATAACGAGGAAAGCGGAAACAAC
CCAAAAGATGAAAAGGAGAAGGTTACCATAGACATGTTAAGAAAACATTG
TTCTAACCCTACCGCCATCATGGATTACATTATGTGTGATAATTTTTTTC
CAGCCAATATAAGAAACCGGGATAGAGTGAAAGATGAAGCACTATAAATT
GTTCTGCTTTTTCGATCAGCCGGTATCACTTCAAATGCTGACCCCAATGA
AGAGCTTGGACAACGAAATGGTTTCTCCCAGAAAGACCTCCTTCAAATCA
ATCGAATGTATTGCCTTCATCTTGTCAACCAAGTCTGAACCTACATCGAC
AATACAACGAGCATGCGTATGGTGAAGCACATGTTTATGGTGTCTCTTAT
GATAAACAATCTGTCATGCATTATGGAAGTTGTTACACGTATCTTGGTAT
GTATGGTGGGCGTCAAGTTTTGTCCTTGCAAACGAACTCATATTGTACAT
CACTCAAAGGTGTGGCTATCCACGAAGCAATGCATGTATTAGGATTTCTT
CACACTCAAGCAAGACGTGATCGTGATAATTATATCACAGTTCATTTCGA
TAAAATCCCAAGTTTGCGAAATATGTTTGCGCAAGCTATTCAAGATTATA
ACCGATTCACGTGTATACGATTCGTACCACGAAAGACCACTGATGTCAAT
TACATCGATGTTATAAGTGATAGTGGGTAAAAATCATTACGAAATCGTGA
ACGGAGATTTGATTCTGGACACTCGATACATCGAATTTCATCCACACCAT
CGAAGCAGACGTGTAGCGGTCGATAAACGGTGGCCAACAAAGGCTGATGG
AACTGTTGAAATACCTTATCAATATGGAACTTCTTATTCTGATGTTCTTA
TCGCTATCAGTGTGAGGTCGTCTTCAAGCAAGGCAATCAAAGGTGAAAAT
ATTTATCATGGGGAGAAAATAGTTGAGCCGCCATTCGGCAATGAAATTCA
GGAAGAAAAGAAGAAACCACCGATTGAAAGAAACGAAAAATCACCGGAAA
AGACGAAGAATCCGGATAACGAGGAAAGCGGAAACAACCCAAAAGATGAA
AAGGAGAAGGTTACCATAGACATGTTAAGAAAACATTGTTCTAACCCTAC
CGCCATCATGGATTACATTATGTGTGATAATTTTTTTCCAGCCAATATAA
GAAACCGGGATAGAGTGAAAGATGAAGCACTATAAATTGTTCTGCTTTTT
CGATCAGCCGGTATCACTTCAAATGCTGACCCCAATGAAGAGCTTGGACA
ACGAAATGGTTTCTCCCAGAAAGACCTCCTTCAAATCAATCGAATGTATT
GCCTTCATCTTGTCAACCAAGTCTGAACCTACATCGACAATACAACGAGC
ATGCGTATGGTGAAGCACATGTTTATGGTGTCTCTTATGATAAACAATCT
GTCATGCATTATGGAAGTTGTTACACGTATCTTGGTATGTATGGTGGGCG
TCAAGTTTTGTCCTTGCAAACGAACTCATATTGTACATCACTCAAAGGTG
TGGCTATCCACGAAGCAATGCATGTATTAGGATTTCTTCACACTCAAGCA
AGACGTGATCGTGATAATTATATCACAGTTCATTTCGATAAAATCCCAAG
TTTGCGAAATATGTTTGCGCAAGCTATTCAAGATTATAACCGATTCACGT
GTATACGATTCGTACCACGAAAGACCACTGATGTCAATTACATCGATGTT
ATAAGTGATAGTGGGTAAAAATCATTACGAAATCGTGAACGGAGATTTGA
TTCTGGACACTCGATACATCGAATTTCATCCACACCATCGAAGCAGACGT
GTAGCGGTCGATAAACGGTGGCCAACAAAGGCTGATGGAACTGTTGAAAT
ACCTTATCAATATGGAACTTCTTATTCTGATGTTCTTATCGCTATCAGTG
TGAGGTCGTCTTCAAGCAAGGCAATCAAAGGTGAAAATATTTATCATGGG
GAGAAAATAGTTGAGCCGCCATTCGGCAATGAAATTCAGGAAGAAAAGAA
GAAACCACCGATTGAAAGAAACGAAAAATCACCGGAAAAGACGAAGAATC
CGGATAACGAGGAAAGCGGAAACAACCCAAAAGATGAAAAGGAGAAGGTT
ACCATAGACATGTTAAGAAAACATTGTTCTAACCCTACCGCCATCATGGA
TTACATTATGTGTGATAATTTTTTTCCAGCCAATATAAGAAACCGGGATA
GAGTGAAAGATGAAGCACTATAAATTGTTCTGCTTTTTCGATCAGCCGGT
ATCACTTCAAATGCTGACCCCAATGAAGAGCTTGGACAACGAAATGGTTT
CTCCCAGAAAGACCTCCTTCAAATCAATCGAATGTATTGCCTTCATCTTG
TCAACCAAGTCTGAACCTACATCGACAATACAACGAGCATGCGTATGGTG
AAGCACATGTTTATGGTGTCTCTTATGATAAACAATCTGTCATGCATTAT
GGAAGTTGTTACACGTATCTTGGTATGTATGGTGGGCGTCAAGTTTTGTC
CTTGCAAACGAACTCATATTGTACATCACTCAAAGGTGTGGCTATCCACG
AAGCAATGCATGTATTAGGATTTCTTCACACTCAAGCAAGACGTGATCGT
GATAATTATATCACAGTTCATTTCGATAAAATCCCAAGTTTGCGAAATAT
GTTTGCGCAAGCTATTCAAGATTATAACCGATTCACGTGTATACGATTCG
TACCACGAAAGACCACTGATGTCAATTACATCGATGTTATAAGTGATAGT
GGGTAAAAATCATTACGAAATCGTGAACGGAGATTTGATTCTGGACACTC
GATACATCGAATTTCATCCACACCATCGAAGCAGACGTGTAGCGGTCGAT
AAACGGTGGCCAACAAAGGCTGATGGAACTGTTGAAATACCTTATCAATA
TGGAACTTCTTATTCTGATGTTCTTATCGCTATCAGTGTGAGGTCGTCTT
CAAGCAAGGCAATCAAAGGTGAAAATATTTATCATGGGGAGAAAATAGTT
GAGCCGCCATTCGGCAATGAAATTCAGGAAGAAAAGAAGAAACCACCGAT
TGAAAGAAACGAAAAATCACCGGAAAAGACGAAGAATCCGGATAACGAGG
AAAGCGGAAACAACCCAAAAGATGAAAAGGAGAAGGTTACCATAGACATG
TTAAGAAAACATTGTTCTAACCCTACCGCCATCATGGATTACATTATGTG
TGATAATTTTTTTCCAGCCAATATAAGAAACCGGGATAGAGTGAAAGATG
AAGCACTATAAATTGTTCTGCTTTTTCGATCAGCCGGTATCACTTCAAAT
GCTGACCCCAATGAAGAGCTTGGACAACGAAATGGTTTCTCCCAGAAAGA
CCTCCTTCAAATCAATCGAATGTATTGCCTTCATCTTGTCAACCAAGTCT
GAACCTACATCGACAATACAACGAGCATGCGTATGGTGAAGCACATGTTT
ATGGTGTCTCTTATGATAAACAATCTGTCATGCATTATGGAAGTTGTTAC
ACGTATCTTGGTATGTATGGTGGGCGTCAAGTTTTGTCCTTGCAAACGAA
CTCATATTGTACATCACTCAAAGGTGTGGCTATCCACGAAGCAATGCATG
TATTAGGATTTCTTCACACTCAAGCAAGACGTGATCGTGATAATTATATC
ACAGTTCATTTCGATAAAATCCCAAGTTTGCGAAATATGTTTGCGCAAGC
TATTCAAGATTATAACCGATTCACGTGTATACGATTCGTACCACGAAAGA
CCACTGATGTCAATTACATCGATGTTATAAGTGATAGTGGGTAAAAATCA
TTACGAAATCGTGAACGGAGATTTGATTCTGGACACTCGATACATCGAAT
TTCATCCACACCATCGAAGCAGACGTGTAGCGGTCGATAAACGGTGGCCA
ACAAAGGCTGATGGAACTGTTGAAATACCTTATCAATATGGAACTTCTTA
TTCTGATGTTCTTATCGCTATCAGTGTGAGGTCGTCTTCAAGCAAGGCAA
TCAAAGGTGAAAATATTTATCATGGGGAGAAAATAGTTGAGCCGCCATTC
GGCAATGAAATTCAGGAAGAAAAGAAGAAACCACCGATTGAAAGAAACGA
AAAATCACCGGAAAAGACGAAGAATCCGGATAACGAGGAAAGCGGAAACA
ACCCAAAAGATGAAAAGGAGAAGGTTACCATAGACATGTTAAGAAAACAT
TGTTCTAACCCTACCGCCATCATGGATTACATTATGTGTGATAATTTTTT
TCCAGCCAATATAAGAAACCGGGATAGAGTGAAAGATGAAGCACTATAAA
TTGTTCTGCTTTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005967XLOC_005967Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010649-proteinTCONS_00010649-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010649-exon-sc0000108-1575043694:288530..288757TCONS_00010649-exon-sc0000108-1575043694:288530..288757Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1575043694:287640..287966TCONS_00010649-exon-sc0000108-1575043694:287640..287966Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1575043694:285746..285913TCONS_00010649-exon-sc0000108-1575043694:285746..285913Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1575043694:285199..285310TCONS_00010649-exon-sc0000108-1575043694:285199..285310Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1575043694:284503..284687TCONS_00010649-exon-sc0000108-1575043694:284503..284687Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1575043694:282809..282899TCONS_00010649-exon-sc0000108-1575043694:282809..282899Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1575043694:281385..282396TCONS_00010649-exon-sc0000108-1575043694:281385..282396Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1510915933:288530..288757TCONS_00010649-exon-sc0000108-1510915933:288530..288757Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1510915933:287640..287966TCONS_00010649-exon-sc0000108-1510915933:287640..287966Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1510915933:285746..285913TCONS_00010649-exon-sc0000108-1510915933:285746..285913Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1510915933:285199..285310TCONS_00010649-exon-sc0000108-1510915933:285199..285310Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1510915933:284503..284687TCONS_00010649-exon-sc0000108-1510915933:284503..284687Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1510915933:282809..282899TCONS_00010649-exon-sc0000108-1510915933:282809..282899Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1510915933:281385..282396TCONS_00010649-exon-sc0000108-1510915933:281385..282396Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1491911889:288530..288757TCONS_00010649-exon-sc0000108-1491911889:288530..288757Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1491911889:287640..287966TCONS_00010649-exon-sc0000108-1491911889:287640..287966Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1491911889:285746..285913TCONS_00010649-exon-sc0000108-1491911889:285746..285913Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1491911889:285199..285310TCONS_00010649-exon-sc0000108-1491911889:285199..285310Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1491911889:284503..284687TCONS_00010649-exon-sc0000108-1491911889:284503..284687Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1491911889:282809..282899TCONS_00010649-exon-sc0000108-1491911889:282809..282899Clytia hemisphaericaexon
TCONS_00010649-exon-sc0000108-1491911889:281385..282396TCONS_00010649-exon-sc0000108-1491911889:281385..282396Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000108supercontigsc0000108:281385..288757 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.70137	4.73667	3.83391	3.31816	5.09935	4.95794	2.69289	3.61427	1.81448	3.50194	3.35366	1.98756	374.733	272.749	22.3903	43.3851	22.7285	26.8721	158.833	317.902	8.33708	8.60679	6.46196	7.28439	16.0386	15.2666	17.8423	19.9369	3.8678	4.09028
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
Blast
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BLAST of TCONS_00010649 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 114.005 bits (284), Expect = 6.971e-27
Identity = 76/251 (30.28%), Postives = 117/251 (46.61%), Query Frame = 3 
Query:  507 CDNFFPANIRNRD-RVKGKNHYEIVNGDLILD-----TRYIE---FHPHHRSRRVAVDKRWPTKADGTVEIPYQYGTSYSDV-RNMFAQAIQDYNRFTCIRFVPRKTTDVNYIDVISDSGCYTYLGMYGGRQVLSLQTNSYCTSLKGVAIHEAMHVLGFLHTQARRDRDNYITVHFDKIPSYLHRQYNEHAYGEAHVYGVSYDKQSVMHYGRSA-------GITSNADPNEELGQRNGFSQKDLLQINRMY 1208
            C   FP  +     +  G      +N  LIL+     +  IE     P       A   +WP    G VE+P+   + Y +  R +  +A+ ++ R TCIRFV  +    ++I +I   GC++ +G  GG QV+SL         +G+ +HE MHVLGF H   R DRD YI V++++I       + +    ++      YD  SVMHYGR A        IT    P+  +GQR   S  D+ ++ ++Y
Sbjct:   34 CGTSFPDGLTPEGTQASGDKDIPAINQGLILEETPESSFLIEGDIIRPSPFRLLSATSNKWPMGGSGVVEVPFLLSSKYDEPSRQVILEALAEFERSTCIRFVTYQDQR-DFISIIPMYGCFSSVGRSGGMQVVSLAPTCLQKG-RGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKS---QSSNMLTPYDYSSVMHYGRLAFSRRGLPTITPLWAPSVHIGQRWNLSASDITRVLKLY 279
The following BLAST results are available for this feature:
BLAST of TCONS_00010649 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL6.971e-2730.28Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
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