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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010645 ID=TCONS_00010645|Name=TCONS_00010645|organism=Clytia hemisphaerica|type=transcript|length=798bp
ttgccTTTGAAATTAAATTGGAGTTCGATTATGATATTTCATTCCATGGA
TGATTTTCAACTGTCAAGATTAAACTAGTTCTTAAATCTTTTAATCCATT
TTACAACATTTTCATTATCTTATCGAAAGTAACCGTGACCATTCGAAACA
AAAAACCTACAATTACAAATTCCAGTGCGATGAGCTTCGACATATATGCA
CACCCACTCTTTTGTACTCCCTTAAACTCCATACAAAGGGTTCATTGTTC
ATAAATATCTATATATAAAGATCTGGTATCGGAGAGTTCATCGCAGACGG
GATTGTAGAAGTACATCGTGTAACAGATACTAAGGAAAGTACAACAAATC
TTTGCTGttttaattccAATCCACCATCATCATGAAGCTTTACATCATGA
TCGCTCTCTTGGCTTTAGCCACCATCACCTCTGCTCGTTATGCTTACCGA
AAAGATCATCCCCAAAGAAATGATGGTTCGCTTTGGTTCAGCCAATTCAA
AGATGCAGATCTCAACGATGATGTTTATCATCCAGGAAAATACGATGAAT
TGAGCAAGAGAGGGACATGCAGTGGTATATGTTTCGCTGGGTTCGGAGGT
TGTTCATCTGGATGCTACTGTAACTTTGCATTCAATAAGTGTATGCCAAA
CACAGGGTAAAAGGACAGGACAAAAACCGCGTACAATAATTTTATGACAA
CACTGGGCACTAGTCATTATTATTTGTTGATGATTATTGTATTGTATTTg
agcttcaatttttttttaaagaaaaacattacATTCAAACtgcaaact Run BLAST on NCBI transcript from alignment at sc0000108:635407..636402+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010645 ID=TCONS_00010645|Name=TCONS_00010645|organism=Clytia hemisphaerica|type=transcript|length=996bp|location=Sequence derived from alignment at sc0000108:635407..636402+ (Clytia hemisphaerica)
ttgccTTTGAAATTAAATTGGAGTTCGATTATGATATTTCATTCCATGGA
TGATTTTCAACTGTCAAGATTAAACTAGTTCTTAAATCTTTTAATCCATT
TTACAACATTTTCATTATCTTATCGAAAGTAACCGTGACCATTCGAAACA
AAAAACCTACAATTACAAATTCCAGTGCGATGAGCTTCGACATATATGCA
CACCCACTCTTTTGTACTCCCTTAAACTCCATACAAAGGGTTCATTGTTC
ATAAATATCTATATATAAAGATCTGGTATCGGAGAGTTCATCGCAGACGG
GATTGTAGAAGTACATCGTGTAACAGATACTAAGGAAAGTACAACAAATC
TTTGCTGGTAAGCTTTTTTTAATCTATACGCATTTTACGTCTCGCTTTTG
TTATCATTCAGACAGTTTGTATATATATAACTTTTATAATTCTTATCGGT
TTCCATAACGTCATCAAACgagttttgttttttcaatttttctcgtATAT
TTACCTGTCGTGGCACGAAATAAAAGTCTCACAAATTCTCCCttttcttt
ttaagttttaattccAATCCACCATCATCATGAAGCTTTACATCATGATC
GCTCTCTTGGCTTTAGCCACCATCACCTCTGCTCGTTATGCTTACCGAAA
AGATCATCCCCAAAGAAATGATGGTTCGCTTTGGTTCAGCCAATTCAAAG
ATGCAGATCTCAACGATGATGTTTATCATCCAGGAAAATACGATGAATTG
AGCAAGAGAGGGACATGCAGTGGTATATGTTTCGCTGGGTTCGGAGGTTG
TTCATCTGGATGCTACTGTAACTTTGCATTCAATAAGTGTATGCCAAACA
CAGGGTAAAAGGACAGGACAAAAACCGCGTACAATAATTTTATGACAACA
CTGGGCACTAGTCATTATTATTTGTTGATGATTATTGTATTGTATTTgag
cttcaatttttttttaaagaaaaacattacATTCAAACtgcaaact
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010645-exon-sc0000108-1491911889:635407..635763 | TCONS_00010645-exon-sc0000108-1491911889:635407..635763 | Clytia hemisphaerica | exon |
| TCONS_00010645-exon-sc0000108-1510915933:635407..635763 | TCONS_00010645-exon-sc0000108-1510915933:635407..635763 | Clytia hemisphaerica | exon |
| TCONS_00010645-exon-sc0000108-1575043694:635407..635763 | TCONS_00010645-exon-sc0000108-1575043694:635407..635763 | Clytia hemisphaerica | exon |
| TCONS_00010645-exon-sc0000108-1491911889:635962..636402 | TCONS_00010645-exon-sc0000108-1491911889:635962..636402 | Clytia hemisphaerica | exon |
| TCONS_00010645-exon-sc0000108-1510915933:635962..636402 | TCONS_00010645-exon-sc0000108-1510915933:635962..636402 | Clytia hemisphaerica | exon |
| TCONS_00010645-exon-sc0000108-1575043694:635962..636402 | TCONS_00010645-exon-sc0000108-1575043694:635962..636402 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108 | supercontig | sc0000108:635407..636402 + |
Blast
The following BLAST results are available for this feature:
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