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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010609 ID=TCONS_00010609|Name=TCONS_00010609|organism=Clytia hemisphaerica|type=transcript|length=1095bp
tttaattttaaattccttttattcaaaataataagttattattatcatta
ttattcaCAACATGGTTTTAATTGTATTTACAAAGACTTCTGGTTCTGTT
TCTCTATTTTATATCTACACACATAAAAATTGACCggaataaaaatttga
atagtttTTGTCCTTCCACTAAATATATTTTTACTCCAGCCCCGTCTTAC
AAATAAGACGTCTCACGCTTTCATTTAGCTCACGGTCGCACGCTCTCGCT
CTCGAACAAAGTCACTTTTAATAAAATAGGTTActctaacttttttttaa
gtaGTGCTGatagtttttattaaaaattctacTGTGATCCATTTTGAGAT
TTGTTTTTTGAGCTCCTTTACAACAGAGGTTAAATATTAAATCTTAGCCT
TTTGTCGACATCTTTTTTGACATCTTTCTAATGTCCATGATATTTGAATC
AACTAAAAAATCCATAAAGTTACTACAGCTTAAGATAACAAGATATTATT
CCGAATTtgaccatgtgtactaaaactCTGGAAAGGGATCACAGTGTAAG
AATACTTcaatatataaaaacaaaaacaaataaaattttaataaaataaa
atgattgaaaattttttcaaaaatttccgcTCTCACTGAATATTTCATTT
GTATATGGTTCAACAGAAGACCATAATTCATCCCTTCAATGATGGTCAGA
CAGGGTTCATTTTTGTTCGTATTCCAGACTTTGAGAGCAAAATACTTCAG
TGCTAAAAGATTTCTCGGGTGATTTCATAATATCTCgcataaaatatttt
tgccaagggaaaatattttatcaaatacCGTACCAATGCATCATTCTTGA
CTTATTATCCAATCAAGAGAAGGATGACAATATTGTATTATGCAACTTGA
TTACGCGTATCTCCTTTCCtgtcaaaaactttttctgtCGTGCTACGTCC
TTTAATCATGTCGTACCACGTTCTTTCTTTTAAttctttcatttaaaaat
aaacGACAAcacattttctttaactttaaaaaaacattcatGTAGCTTTC
TTCTCTTCGTCCTCATCCAAAGTGTCCGATAAAAAATCCGGGCTN Run BLAST on NCBI transcript from alignment at sc0000107:583018..584112 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010609 ID=TCONS_00010609|Name=TCONS_00010609|organism=Clytia hemisphaerica|type=transcript|length=1095bp|location=Sequence derived from alignment at sc0000107:583018..584112 (Clytia hemisphaerica)
NAGCCCGGATTTTTTATCGGACACTTTGGATGAGGACGAAGAGAAGAAAG
CTACatgaatgtttttttaaagttaaagaaaatgtgTTGTCgtttatttt
taaatgaaagaaTTAAAAGAAAGAACGTGGTACGACATGATTAAAGGACG
TAGCACGacagaaaaagtttttgacaGGAAAGGAGATACGCGTAATCAAG
TTGCATAATACAATATTGTCATCCTTCTCTTGATTGGATAATAAGTCAAG
AATGATGCATTGGTACGgtatttgataaaatattttcccttggcaaaaat
attttatgcGAGATATTATGAAATCACCCGAGAAATCTTTTAGCACTGAA
GTATTTTGCTCTCAAAGTCTGGAATACGAACAAAAATGAACCCTGTCTGA
CCATCATTGAAGGGATGAATTATGGTCTTCTGTTGAACCATATACAAATG
AAATATTCAGTGAGAgcggaaatttttgaaaaaattttcaatcattttat
tttattaaaattttatttgtttttgtttttatatattgAAGTATTCTTAC
ACTGTGATCCCTTTCCAGagttttagtacacatggtcaAATTCGGAATAA
TATCTTGTTATCTTAAGCTGTAGTAACTTTATGGATTTTTTAGTTGATTC
AAATATCATGGACATTAGAAAGATGTCAAAAAAGATGTCGACAAAAGGCT
AAGATTTAATATTTAACCTCTGTTGTAAAGGAGCTCAAAAAACAAATCTC
AAAATGGATCACAgtagaatttttaataaaaactatCAGCACtacttaaa
aaaaagttagagTAACCTATTTTATTAAAAGTGACTTTGTTCGAGAGCGA
GAGCGTGCGACCGTGAGCTAAATGAAAGCGTGAGACGTCTTATTTGTAAG
ACGGGGCTGGAGTAAAAATATATTTAGTGGAAGGACAAaaactattcaaa
tttttattccGGTCAATTTTTATGTGTGTAGATATAAAATAGAGAAACAG
AACCAGAAGTCTTTGTAAATACAATTAAAACCATGTTGtgaataataatg
ataataataacttattattttgaataaaaggaatttaaaattaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010609-exon-sc0000107-1491911889:583018..584112 | TCONS_00010609-exon-sc0000107-1491911889:583018..584112 | Clytia hemisphaerica | exon |
| TCONS_00010609-exon-sc0000107-1510915933:583018..584112 | TCONS_00010609-exon-sc0000107-1510915933:583018..584112 | Clytia hemisphaerica | exon |
| TCONS_00010609-exon-sc0000107-1575043694:583018..584112 | TCONS_00010609-exon-sc0000107-1575043694:583018..584112 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107 | supercontig | sc0000107:583018..584112 . |
Blast
The following BLAST results are available for this feature:
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