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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010603 ID=TCONS_00010603|Name=TCONS_00010603|organism=Clytia hemisphaerica|type=transcript|length=1684bp
CTCGAATCTTTTCATGCCTTTTATGGTAATTGTCGTGAAAAAAGATTTCT
GTTGTTAATTGAGTTATCTGAAAAAGGTAGTGTACAGACACTTTtatctt
ttagtaaaaacagAAATTGTAAATTACAAAGATGGAGTTGGAAGAAATGC
TTTCCCACTTTCGAAAGCTAAAAGCATTGACAAAGAGTgaagtgaaaaga
aaaagatcaaacatgttgaaagaatttgatggcgactgttttttcaaaat
cgcACTTTGGCCGAAgtttattcgaagaaaattcttttcgAGTCTTTATG
GCGATTGTGatacttttgattttgtatctgtTTTTTTCAGGTAAAACATA
CTTCCTTACATAGTATTAAACACTCCCCCGGTGTAAATTTCAGACCCCCG
CCACTGAAATATACAAGTTTCTCGCgagtttttatgattttttgattaCC
TCACCAAAAACAAATAGTTTTGTATTGTTCCttggtgagttccactttga
cgatttttcgaCGTGGAGTAATGTCGACGTGGATTTTATTTTTCGCTACT
GCTTAGTCTACTATGTATANNNNNNNNNATATTTGGCGTGGTTTCTGTCA
TCACATGTAAAAAATCCACGTTGGAAAAAACGAATTTACCAACTTGACTG
GTTATTCAAAAACGAATTTTTTCATCGCGATCAATGGTTCTACTTCGATA
TTTACGAAACAAAATATCTATATATGAACGGTAATAAACGAATAAAACGC
TAGACTGTGATGGTAGTATTTCTAATGAGGAGTGTGCTGGTCCTACATTC
ATGTCATGCTGCCATATTTAGTTTGATTTTACTTAACAGACTTAACatca
aagaaattaatttttcggGCTTTCCATTAATTAGTGGatgaattaattaa
ttaaattaattgGCTTTTCAATAATTAATTACTCAAATCGAATACATTAC
ACAATTAATACATCACTTAATTGATTGATAAAAAATTTGTGATTTTGGAT
GGATGTGATTTTTTGCTTTTGCTATGTATGATATTTGCGTGTTTTAATTC
TTTTGTTTCTTTTAAGATTTTTACACGTTTTTATAAGAACTAAATAAGAG
CCTATGCATTTGAGCCTAAAAAATATTCTTATTTCTggcattttatgagt
atttttattATGTTATTTACTAAGGATTTACATGCTTTAGAGTTTACCAA
gactcatgttcttatatactttgttcttgtagaaaaaacaacgtgtacaG
TATACTACATTCATATATAATCTTTTGATGTGcttttaaatttgttaaaa
aggCGGTCGGTTGATTGGGTTTTTTCTTGCTACCGCtgacgaaaattaga
taaataGGTAGATTTGTTTTTCTGCACGTGGTGAACATCGTGAAGATCTT
TTTTTGGGTATATTTAATGACAGCTTCCCAATTTTTAACCGAATCCTATC
AGCGGTTAAAATATAGATGCCGGTCAGATGGGTTTTATTCACAAGGGGTT
AGGTTCTTACTCCTGCGAATATTTTTAGTTTAGAGAATATTTACTTTATC
ATCAATAGTAGCAAAATTAAGTTGTATtatgttacaaaaaaaaattagta
ttgAGATCCTTTATAACAGATTATGCTATGGGTCCTCATCCGAATTTTAT
TGTTAAGAATTTGAGTCGTACAGCATTACGGTCC Run BLAST on NCBI transcript from alignment at sc0000107:267290..268973 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010603 ID=TCONS_00010603|Name=TCONS_00010603|organism=Clytia hemisphaerica|type=transcript|length=1684bp|location=Sequence derived from alignment at sc0000107:267290..268973 (Clytia hemisphaerica)
GGACCGTAATGCTGTACGACTCAAATTCTTAACAATAAAATTCGGATGAG
GACCCATAGCATAATCTGTTATAAAGGATCTcaatactaatttttttttg
taacataATACAACTTAATTTTGCTACTATTGATGATAAAGTAAATATTC
TCTAAACTAAAAATATTCGCAGGAGTAAGAACCTAACCCCTTGTGAATAA
AACCCATCTGACCGGCATCTATATTTTAACCGCTGATAGGATTCGGTTAA
AAATTGGGAAGCTGTCATTAAATATACCCAAAAAAAGATCTTCACGATGT
TCACCACGTGCAGAAAAACAAATCTACCtatttatctaattttcgtcaGC
GGTAGCAAGAAAAAACCCAATCAACCGACCGcctttttaacaaatttaaa
agCACATCAAAAGATTATATATGAATGTAGTATACtgtacacgttgtttt
ttctacaagaacaaagtatataagaacatgagtcTTGGTAAACTCTAAAG
CATGTAAATCCTTAGTAAATAACATaataaaaatactcataaaatgccAG
AAATAAGAATATTTTTTAGGCTCAAATGCATAGGCTCTTATTTAGTTCTT
ATAAAAACGTGTAAAAATCTTAAAAGAAACAAAAGAATTAAAACACGCAA
ATATCATACATAGCAAAAGCAAAAAATCACATCCATCCAAAATCACAAAT
TTTTTATCAATCAATTAAGTGATGTATTAATTGTGTAATGTATTCGATTT
GAGTAATTAATTATTGAAAAGCcaattaatttaattaattaattcatCCA
CTAATTAATGGAAAGCccgaaaaattaatttctttgatGTTAAGTCTGTT
AAGTAAAATCAAACTAAATATGGCAGCATGACATGAATGTAGGACCAGCA
CACTCCTCATTAGAAATACTACCATCACAGTCTAGCGTTTTATTCGTTTA
TTACCGTTCATATATAGATATTTTGTTTCGTAAATATCGAAGTAGAACCA
TTGATCGCGATGAAAAAATTCGTTTTTGAATAACCAGTCAAGTTGGTAAA
TTCGTTTTTTCCAACGTGGATTTTTTACATGTGATGACAGAAACCACGCC
AAATATNNNNNNNNNTATACATAGTAGACTAAGCAGTAGCGAAAAATAAA
ATCCACGTCGACATTACTCCACGtcgaaaaatcgtcaaagtggaactcac
caaGGAACAATACAAAACTATTTGTTTTTGGTGAGGtaatcaaaaaatca
taaaaactcGCGAGAAACTTGTATATTTCAGTGGCGGGGGTCTGAAATTT
ACACCGGGGGAGTGTTTAATACTATGTAAGGAAGTATGTTTTACCTGAAA
AAAacagatacaaaatcaaaagtatCACAATCGCCATAAAGACTcgaaaa
gaattttcttcgaataaacTTCGGCCAAAGTgcgattttgaaaaaacagt
cgccatcaaattctttcaacatgtttgatctttttcttttcacttcACTC
TTTGTCAATGCTTTTAGCTTTCGAAAGTGGGAAAGCATTTCTTCCAACTC
CATCTTTGTAATTTACAATTTctgtttttactaaaagataAAAGTGTCTG
TACACTACCTTTTTCAGATAACTCAATTAACAACAGAAATCTTTTTTCAC
GACAATTACCATAAAAGGCATGAAAAGATTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010603-exon-sc0000107-1491911889:267290..268973 | TCONS_00010603-exon-sc0000107-1491911889:267290..268973 | Clytia hemisphaerica | exon |
| TCONS_00010603-exon-sc0000107-1510915933:267290..268973 | TCONS_00010603-exon-sc0000107-1510915933:267290..268973 | Clytia hemisphaerica | exon |
| TCONS_00010603-exon-sc0000107-1575043694:267290..268973 | TCONS_00010603-exon-sc0000107-1575043694:267290..268973 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107 | supercontig | sc0000107:267290..268973 . |
Blast
The following BLAST results are available for this feature:
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