TCONS_00010520 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010520
Unique NameTCONS_00010520
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3020

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010520 ID=TCONS_00010520|Name=TCONS_00010520|organism=Clytia hemisphaerica|type=transcript|length=3020bp
tGATATACTGTTAGAATGCCAAGATGCTTACGACAGAGCGTCTCGTTTGT
CAGTCTGTTGTGAACCGTTGATCACCAGTCAACCTATACCTATTTCCATG
ATCAAAAGTGAAGATCTTGCAATCTACACGCGTTGGTTTGTTTATTATTT
GCACTCCATCAAAAAGATTACTCATTTTATAAAGGTCATAGAATGGTTAC
CGCAAACAAAATTTTTACTATCCAAAAAGCATGATAAATtggaagaaaag
aaaacagTATCTAATTCAAACAAAAAGTTTACGTCTCGTGATGAAAGTAA
TGGCTTAGTTTCTCCAAGGTTTTTGAGTCCACGATCCTTTTGGAAGAGAG
ATGAAAAACCAACCCCTGTGTCAGAAACGAGTAAAGATATCAAACCTTTG
CCCTCATTCAGTACTGAGATTGAAGATTTCTCAAAACAATTGGATGTGCT
ATTGGCGAATTACGACATCAAAATGCGTTGCCACCAAGTTGAGAATCAAT
CTGACGGCATGGATATGTACAATCTAGTCATCCGCAAATTTAAACAACAT
CATTTCATTCAAGAACAAAATCGTCtatttccaatctatgattcaGAGAC
ACTCGAGAATTCAAAGgaaacaaaagaaaaaggtcacatgACGTACAAGA
AAGAAAGTAATTGGTTGGCTTTCATACAAATTCTACCTGATGTCTACAAC
ACTCAGAAAGCAGCTTTAACCAAACTAAAGGAGCAAGACGCAATGGATCA
ATTGATGTTTGTTCAATCCAAAATATTAAGTGTTAAATCTTCTGATAAgG
TATTATACTTGCTGAAAGAACACGCCAAACAAATCGGAAGTGATTTGAAA
ACCTCTTCATCGACCAGTTTGTTGAGAAGAAATACCAAAGATGTTTGGTC
CAACGTTTTCAACTTCAAAAGGCCACAAAGCGCACGCGGTGGGAATAACA
GCGGTGGATACGAAGAAAACTTATCGTCTAAAGGAAGTGAAACTTTCGAT
AAATCTTCAGGCAGCGGTGAAAATggcggtggtggtggtggagAGTTTGA
TATCACCGAAGCTGTGCATAAACTAGGCTTGGAAGATGATGACAGTACAA
AAACACATTCGTTCAATGTAAATGGTGCTTTATTATCGCTAATGCTTTTA
AGACATCTCAAGATTAAAGATCACCGCAGAACCgttTTGAACACGTTAAA
CTATTTCCGATCAGTAGAACGAACACTCACCATCAATGATGTTGGTTTCT
CTGCGAAGGAGAGCAAAATTCATTCGTCCAGTTACAAACCACACCACGAA
GGAGTGTCGGGCGGGATTGGAGATCACCAATACACCCATAACACGCCCGT
TGACTACATTAAGCATCAATTTAACACCCTCCAAGATTTGGATGTTGAAA
ATTATGATGATTTTTATAGTATAGAAGATAATTTGGTTCATGTGCAAGAT
CAAAAAGGATGGCTTATTATGTATGATGCAGCTTTGAAAGATTTCGGTGA
ATTGGAAAGCGAAATGATGTTGATAGCAACGCATTATTTGGAGGCTGCTT
GTCAAGACAACGAAGATGCTCAAAGTAGACCACGTAGCAGTCACAAAAGA
GAAGCTATCAATCTAGACTACTACGGTCTACGAAATGTCGATCGATTTGC
TGTTCTGTATGATTTGTGGCAATGGGAGATGAAATTTCAAGAGAAGAAAA
GACAATTATTGGATTGCTTTTTGGAAGCCTATCATCATATTACTAATGAG
AAAGAAGCGAAAAAAATGTGCCAGgtCCTCGTTAACATCATGTATCAGAG
ACCAAGGTTCAATTTCACTCATGGTTATTTCATTGAAAGCTACCAACTGG
AGTGTAAACTCCTAGAAGAAAAATGCAAAATCATTAAACTCATATTAGAC
GATCATATACAAGAACAAAGGCATTACACACAAATTATCAACCGTGACGA
GAAACGGTATTACGGTATGCCCGGCCCAATGATTCCGGTACAAGCCATCT
CCGTGAATACAAGCCGCCCGGTTTTAAAAGACATCTTCATGTTGGAATTT
CATCCGACCATAAGCACCATCGCCGCTGTACCATCTGCTATCTTGAAATC
ACACCGCGAGCTAATACACATGTTTCAGCCTGAATCCATTACTGATGAAG
TGAATTTGGAACTCAGTCTAGTGTTAGAGATATCAAAAGAATGGACAACG
AAAGATTCCTTTGGGAACAGTTATTCAGCACAGACAAGGAAAGATGTTTT
CTCGGAAATTTTCATCGAAGACCCAATGTTTGTTTGTGAAATAGGTGATT
CTCTAACAGCTCAACATGATAGCAGAGGAACACATAACAAACGTaaagaa
gaaatcaaaaagatgTTGAACACATGGTCTAAACTTCTGGAGATAATCAC
AAACAGACATCGTCTTTTGGAGAATATCAACGAAACTGATATTCTCCATA
ATGCTTACATTTTTATCTCCCGAAAAATTGGCGTGGATGAGTGTCATTTA
CACCTGAGACCAGTTTCGTTCGAGTACGCACAAGCGAAAACTAACGCCAA
AACAAAACCGCTCTCTTTGAAAGAACTATTGGATGATGAGAGCCGAGTCG
ACAGATACATACCTAACAATTCCAGTCTAGGAATTTCTGAGCTTGACGAA
AAGCATGTTTCCGTGTTCAACTTTCGAAATCGTGAAGGGCTTATCAATTT
AGTGTCAACACCCAATTCATCAGAAAAAGTACGCGCAGCATTATCCGCCC
AAATTTGTCAGAAATTTCTGCTGATGTCAGCAGTACAGCAGGTGAATGGG
AGCTATAATGAGATTCGAAGTGAAGAACAGCAGAGGTTGAAAATGGAACA
GAGTAGTTTTTTGATTGGATCATCGAGGAGTTCGAGTCAATCTTTGATTA
AAACAAGCTTGCCATCACAGCTCATGATACCAATGACTCAGTCACAACAA
ATGTTCAACGAAAATCTTATCAACGATAAACTCAAGCGATCTTTCTTATC
CTTGCAAGCTGAAAAGTTAN
Run BLAST on NCBI

transcript from alignment at sc0000107:278480..289121+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010520 ID=TCONS_00010520|Name=TCONS_00010520|organism=Clytia hemisphaerica|type=transcript|length=10642bp|location=Sequence derived from alignment at sc0000107:278480..289121+ (Clytia hemisphaerica)
tGATATACTGTTAGAATGCCAAGATGCTTACGACAGAGCGTCTCGTTTGT
CAGTCTGTTGTGAACCGTTGATCACCAGTCAACCTATACCTATTTCCATG
ATCAAAAGTGAAGATCTTGCAATCTACACGCGTTGGTTTGTTTATTATTT
GCACTCCATCAAAAAGATTACTCATTTTATAAAGGTAAGTTAGCATAAAT
TAGGGGGGAAATTTTTGTGCAGTTCAAATGCACTTTCATATTATGCCAAT
TCTTTTAGCAATTTCCGTTGAACTAATATTCACCATTTGTCACGAATTTT
GTACCCTGTACCAGACGACAACGGCTTTTTACTCGACGCCGTTCTAAAAG
AATGGCAAAAAAATGCGTGTTGGGATAGATATAGAGAGGGTACGAATAAT
GCTTGACTTGAAAGTTCATGATGAgaccaaattttacgaaataaGCTTAC
AAGTCTAGCTAATCACGATATCTCATCCTCTCCCATACTGTAGGTTTTTT
AAAATTGCTTTGATTTATAAAGTGGCCctaatttctttctttattacAGG
TCATAGAATGGTTACCGCAAACAAAATTTTTACTATCCAAAAAGCATGAT
AAATtggaagaaaagaaaacagTATCTAATTCAAACAAAAAGTTTACGTC
TCGTGATGAAAGTAATGGCTTAGTTTCTCCAAGGTTTTTGAGTCCACGAT
CCTTTTGGAAGAGAGATGAAAAACCAACCCCTGTGTCAGAAACGAGTAAA
GATATCAAACCTTTGCCCTCATTCAGTACTGAGATTGAAGATTTCTCAAA
ACAATTGGATGTGCTATTGGCGAATTACGACATCAAAATGGTTTGTATTC
TTTTTCACTTGGTTTTAGGCATTTTTATTGTAGAAAAATGTCTGTTTCTG
TTCGTTCATAACTTGTGGATTTGAcacaattatttatttatttttctcca
gCGTTGCCACCAAGTTGAGAATCAATCTGACGGCATGGATATGTACAATC
TAGTCATCCGCAAATTTAAACAACATCATTTCATTCAAGAACAAAATCGT
CtatttccaatctatgattcaGAGACACTCGAGAATTCAAAGGTAATTGT
GCGAAATTGCTGCAAAATGTCTACTTTTAATGCAGTCCTTTAGAGACTGC
TCGATATGCCTGCTCTTTTGGGATTCTTCTGTTAGCGGATGAAGGTTAtg
tatttgatttttataatattCTTAGGATTAGAATTAAGTTGGTACATAAC
CAATTCCTTTCGACAGGACTGACTTCATAATTTCTgaatagaggtttttc
atgttttatagaGTTATGTAACATCCGCCATTACGGAAGCAAATGTTCGA
ATCTTTAGATGCGATCCACATTACACAAATCGAAcctttgcttccataat
ggcggaaattacatAAACTaacaaattatgaaaaaacCACTATAAGATAA
AATGAGGAAGAAAAGCGAATTTAATCGGACTTTAACACGACTTTCTAAta
ggaaacaaaagaaaaaggtcacatgACGTACAAGAAAGAAAGTAATTGGT
TGGCTTTCATACAAATTCTACCTGATGTCTACAACACTCAGAAAGCAGCT
TTAACCAAACTAAAGGAGCAAGACGCAATGGATCAATTGATGTTTGTTCA
ATCCAAAATATTAAGTGTTAAATCTTCTGATAAggtttcttttaattttt
atagaccttttcataaattacgtcacaggcaacgcttacctcgttttaaa
tattgctatggtaattgattcccaaAAAGAGTTCATAAGAAGTTGACTCT
ATTATGAAAGTAATGATTGAATACTCAAGGGATTCAATCACCTTGATAAT
GGTTTCAGAACGAGGCAGTCACTgctctcaaaataatttatgagaAGGCC
TATTTTCAAGACTTTTATTAAGGCTGATCTACTAGGATCCTCCATAACAA
AAGtaataaaagtgaaaatatAGTTTTGTACCCCCACTGCTTGCTTAGAA
CATTACGGCTTCACATCGTTCTGGAATGAAACGGTTCTGAAATATCGtgt
aaatacaaaaagtttgaaacgtcaaaaaataagCTTTTCAAAGCGAATCG
AACAGTTCTTATTAAACTGTTTTCAttggaacggaactgctccgagACGT
TCTGAAAAGAATTATGAACACTTCCTTCTTGTAACAGAACCATTACCGGT
ACGATACGTTACCGTAACGTCTTGACAGAGTTGACTTTTTCGGAAATTTG
ACGGAATGAATATCGTTAATGGTTCAACTAATTATGCTTAACCAAGCCTC
CCATCTCCTGGATATCTACTCTCCGGTACATATTAATCTCGGGACGGATT
TCTTAATTTTCGGGGAATAATTGCGGAAAAATCTATCTGGGATTGCTTTG
TCCAAGTCATAATTTCGATTTGTTTTTAACTTCGCTAATGGAATATATTC
TTCTTTATTGCGCGAGTGAGAAGGTGATACTCGATATAAACAAAACGCAA
TCCCGTGCAGATCAACATAAACAGTTAGTAAAGGGTTCGTAACGCTCTGT
ATGTCTTTATCTATCTTTATATCAGGTATTATACTTGCTGAAAGAACACG
CCAAACAAATCGGAAGTGATTTGAAAACCTCTTCATCGACCAGTTTGTTG
AGAAGAAATACCAAAGATGTTTGGTCCAACGTTTTCAACTTCAAAAGGTA
TATGTCAATTTAAAATAAGAATTCACAGGATAATTGATTAAATGATTCTT
TCGAAAATCGAAACTCACAATTATACCCCTCATTTCATGAGATTTTCTTG
ACAGTAACTAATGGTGAAAAGAATTCTCTTTTTATTGGACAAAGTTTATG
AAATACAAGgggatcttcaaggggaattggatttttatcgaataagggag
atTATCGAAtgagggagcgtcgtttatgagagtttcttgttgacggggac
tttaaatttcatcgaatagtagaacgtcgaattagagagcgccaaTTGTA
ACTACCATCTGGGCTATTATTGGCGACTTTTTACTTAGACTTAGACTTTC
CACTTTCTCCACTTGTTGTATATCCAAATAATAGTAAACAGACTATACTA
TTTAGGTTAAATTGCGACCATTTGTTCGATcctatatttttttaaactct
tTATCTATCAGTAGGCCACAAAGCGCACGCGGTGGGAATAACAGCGGTGG
ATACGAAGAAAACTTATCGTCTAAAGGAAGTGAAACTTTCGATAAATCTT
CAGGCAGCGGTGAAAATggcggtggtggtggtggagAGTTTGATATCACC
GAAGCTGTGCATAAACTAGGCTTGGAAGATGATGACAGTACAAAAACACA
TTCGTTCAATGTAAATGGTGCTTTATTATCGCTAATGCTTTTAAGACATC
TCAAGATTAAAGATCACCGCAGAACCGTATGTAGTTTtcctttgatttca
tttttggaGATTTTTGTAGCACTATTTTATAAAATGTGACCAACCAGCGT
CCAAACAACGCTATTATACGGCTGTTGGGTGAATTGAATTTTACATTTTC
TTAGTTTTCTCTTAAAGGACATGATTTAACGTTTCTCCTACCATTACCAT
TTGCTTACAGTCTTACACAGCAAAATAGAtaacaacccccccccctcccg
cATTTAGAAATTATAATGCTAAAGAGGACGCGTCTCGTTTTTATATCATA
GAATATCTTTACATCATTTCCTGTAGCATTTTGGAATGTGTGATATTTTC
atgtttcattttttcgaaTGATTGCCCGTCAAGTAACccggggtacttag
gcaaaaattggtgctgggtatgtgcgtgtCCCAAGGGTcggttttcttat
ttttcaaagtctctctaaccTAAGGgtggaaaatctgaaatttttaaatc
aGCCTCTCttagggtcggaaaattcacaatttttttattttattttttta
ttgtaaaaatgtctctctaagggtcagggTTTGGAGGTCCGGCACGGACA
TACCCAGCATCAACCTTAGTACCCCCCTACCGGGCAAGCAACTCATGAAA
AGGCTTGAAATTTTTGAAGGTGAACAAGGTTTGGATATTTGCCCGTACTC
TTCTTTAGATTTTGGTCATCAGCTGCCGAAAACACGCCATCGTAATTCCA
ATCAGAtatcttattttgaaaataatacttttttgttttcaggttTTGAA
CACGTTAAACTATTTCCGATCAGTAGAACGAACACTCACCATCAATGATG
TTGGTTTCTCTGCGAAGGAGAGCAAAATTCATTCGTCCAGTTACAAACCA
CACCACGAAGGAGTGTCGGGCGGGATTGGAGATCACCAATACACCCATAA
CACGCCCGTTGACTACATTAAGCATCAATTTAACACCCTCCAAGATTTGG
ATGTTGAAAATTATGATGATTTTTATAGTATAGAAGATAATTTGGTTCAT
GTGCAAGATCAAAAAGGATGGCTTATTATGTATGATGCAGCTTTGAAAGA
TTTCGGGTAGGTGTACAATTGAGAAAGAATCTGATTACGTCGCTCTTTCT
GCCAATCTATACGTTTGTCTTTAGCCCAAAATCCATTTAAGGTTCAAAAT
TCTGACAGGAGTCTAAATCATACAAGATTTAATTTCAATCTTCTAATGAC
TATTCTTGTTTGTGTTTTGAGTTGCTATAGTACGTTTTTACTCAANTCTA
ATGACTATTCTTGCTTGTGTCTTGAGTTGCTATAGTACGTTATTACTCAA
ATAAGAgttataaaaacaacaaaaaggcAAAATAGGACATTTTCGTTGGG
AGTAAGTTGTTATAGTATGACTTCGAAAACGAGATGCCTTGgatttttta
caagatgcttaactgattggttatttttaaacaatagggatgacgcgttc
tttagaaaaagtaataaaatcgtttgtctcaacatttaacgaccaacaga
gtcaccaaagaacttgtaaaaactccagcttgaccctcGAAAACGGGGCT
CATGATGTTATTTATTAAAAGGCCTATTGTTCCCACTTTCAATCGTTAAA
AACTTACTTCTCAGTGAATTGGAAAGCGAAATGATGTTGATAGCAACGCA
TTATTTGGAGGCTGCTTGTCAAGACAACGAAGATGCTCAAAGTAGACCAC
GTAGCAGTCACAAAAGAGAAGCTATCAATCTAGACTACTACGGTCTACGA
AATGTCGATCGATTTGCTGTTCTGTATGATTTGTGGCAATGGGAGATGAA
ATTTCAAGAGAAGAAAAGACAATTATTGGATTGCTTTTTGGAAGCCTATC
ATCATATTACTAATGAGAAAGAAGCGAAAAAAATGTGCCAGGTATGTAAA
TATTAACAATTTAATTTGAATTCTGTTTTATGATTTTAAgacaaccaaaa
aaaaaagtactgTTCCCTTGTTTTAAGGATACAAGCTTTAtgcaattttt
tcttttctcttccagACTATCATATTTCATTATTGCAGTGTTCTCTTTTA
CAGCAAGATCAGTGCGAAAAACATGCTTAAAATCCTAGGGACGTGTTCTT
GATCTTAACATAACAGAATATCataattgattttgataatttAATTAGTA
GTGTTTATTGTGAATTAGAAATTTACTCAATAAAGCTATTGGACCATTAG
AAAGCAGAATCTATTGAGCTCTGAAATGACTTTTATCTTTAGGGTGctta
taaaaagcaaaacgCCTTACAAAAATAAAATCGTCTGTAATCTGATTCTT
TTCAAATACGTAAGAAGTTTGTATGTGATCGTAAAAGAGATTTTAGATGT
ATTTTTAAAAGTGAACTATATTTGAGTCACTCATACTTGTATCGCTTCAA
AGATGAGTTCCGTTCACTCAGGTGAAAGAAATTTGGCTCATTGTGCTGCT
ACAGCAACGAGCCACCCTCAGCAAGCTGCCAACCATGATGTAACAAAACT
CAAAGGAGAATATGAAAGACAAATCCAAACATTGAAGTTGGAACACAAAA
TTCAACTTTTGGAATTGGACAACAAAATGTCGAAACAAGAAAAtgacaac
aaaacaaagatgtTAGAGttgcaaaaagaaaatcaatcgCTTAAGCATGA
AAATGAGTTAATGAAAGTAAAGAGTGCTCATGAGCTACAATCCAACAAAC
TTTTGGTCGATTCAAACTTAGAAAGACAAATGGCTGCCAAGGAACTCGAG
TTTCGAGACCTAGTAAAGGTAAAGGACGAAGAAATTGCCTTAAAGGACAA
AGAAATGATGATAGGTATGGcggaaaaagaaaaggaaatcaTTGAAAAGG
ACAAGGAGTTTCTTAAGCAAGAAAATATGCACAAAATCGAAATGATTAAG
ATGAAGAACGAAATGGAAAAGACCATCGAGTCTTTGCGCAACGAGATcga
aatgcaaaaaaagaaagTCGAGGAGCGACCGAAGGAAATGGGTAACCCAA
ATGAAATTGTGGTTAATCCATTTGAGTTACCTTTGATGGAACAGCTAGAA
TGGGGTACAAATATCATTTCGAATGAAAAGTATCAAGAATGGTATAAACA
TATTATCAATGCAATGGAAAACAAAAAACTGTACAAAAATGAACGCTTTT
TGTACATGCGTAAAATCTTTGGTTGTTTCAAAAATGATCTTTTCTTTGTG
AACCTCCACAGTGGCAAAGCGCGCGTTGAAAATGACACCGACTTTCAAGC
GGAAGGTTTGGACACGCACGCTCTTAATAAAGGAACATTTGTATTGCTTC
ACCCGAAAGACGCATGGCAATCTCTTCGAACACAAAGAAGCGGTCGTACC
GGATTTTATGATTactggaaatttttaattttttggccattttcatcatg
gacattcttataaagtgtattcttataaaaaaaaaagcgtgtattgttAT
TCAACGCCCTGATGTCCTGTTGAGTGGAATTCAGGGACAAGATTCTCAAA
TTCGACAATGTTTTTGTAAATCATAGACCTAATTTGTTCAATTTACTATA
GCATTATGTAATTTATAAATCATTTCCTAAAATTGTCGTTTCCTGACAGG
ATCCACGCACCCAGTTACCTTTTTTTAGGGaataaaaatacaatgaaaac
aaCCATGCAAACCTCTCAAATCATTTGTCGATTGAAACCCTACGTATTTA
ACTTGAATCAACAAGTtaactttttcgttttttggccAAATCTGCAAAAT
CGAATCCGTAACAATAATTTCCAAAGCGTACAGTATTCGTTTTTTTTTGG
AGACCTTTTGCCAATTAAGGCCtggtaaatatatttttgatctAACTGTC
GTCACCAGGAAAAGATGCGAGGGAAAACTGcataaaaatgacgatttttt
caaagtttgaacTCAAGAAAAATGATTGATTTCATCATCGATAGTGTATG
AAATTGGGCAAAAAAGCAAAACAGTTTATTACAGGGCAAGGCCTTTACTC
GAACTTACACGTAGATGCTTTTATTTGAAGCTATAAATTCTGTCAGACCC
AATATAGTTTAgacgaaaaaatctaaaaaatgatttaaatggATTAATTA
TTGCGAGAATTATATTGCAAAAACCCTTagtaaaattaaagaaattaatt
gaaaaaGGGGCTGATTCACAAagaaatttcgcgaaaattaaaatattttt
gaaaagaattatctcgcgaaaatttctacTGGCGAAATTTTATCCGCTTA
AGGTATACATAAAGCGAGTGCACCTTGATTTGATTTTCTcgtcacttttg
ttttttttctttcaaggtCCTCGTTAACATCATGTATCAGAGACCAAGGT
TCAATTTCACTCATGGTTATTTCATTGAAAGCTACCAACTGGAGTGTAAA
CTCCTAGAAGAAAAATGCAAAATCATTAAACTCATATTAGACGATCATAT
ACAAGAACAAAGGCATTACACACAAATTATCAACCGTGACGAGAAACGGT
ATTACGGTATGCCCGGCCCAATGATTCCGGTACAAGCCATCTCCGTGAAT
ACAAGCCGCCCGGTTTTAAAAGACATCTTCATGTTGGAATTTCATCCGAC
CATAAGCACCATCGCCGCTGTACCATCTGCTATCTTGAAATCACACCGCG
AGCTAATACACATGTTTCAGCCTGAATCCATTACTGATGAAGTGAATTTG
GAACTCAGTCTAGTGTTAGAGATATCAAAAGAATGGACAACGAAAGATTC
CTTTGGGAACAGTTATTCAGCACAGACAAGGAAAGATGTTTTCTCGGAAA
TTTTCATCGAAGACCCAATGTTTGTTTGTGAAATAGGTGATTCTCTAACA
GCTCAACATGATAGCAGAGGTATGGTGTTTTTATCACAGatttttaaagc
ccgaagggctagatggcgtgttctggctgaaaagtgtgtcgTATttcggt
aggaaatcctactAAAGCCACGTGACANATGGTGTTTTTATCACAGattt
ttaaagcccgaagggctagatggcgtgttctggctgaaaagtgtgtcgTA
TTTCGGTAGGAAATCCCACTAAggccacgtgacattacaatagaatttaa
gcgcttgaccaatcagaagcttcacggattttcgaaaacaaaagcaacaa
tattttttgcgatattcaactttttcatcttAGAAAAGCACTCCATCTGG
CcgttcgggctttacagaaatctgtagtTTTTAAAAACAGTCCTCCCAAT
ATCTTTTTGGTATATCGTCAAAGCATTTTATAATGCTCGTAAAAATTCAT
TGCCAGACTAATATATCCCATATTCtcctcaaatttttccaaattctaaa
aaaaactaatcaaaTGACAGGATTCCTTTCTAACGACGGATTTAATCATT
TAGGTATCGAACTGACATGTTTTAGAACGTTCAATTtccaaaaccttttt
tccaGGAACACATAACAAACGTaaagaagaaatcaaaaagatgTTGAACA
CATGGTCTAAACTTCTGGAGATAATCACAAACAGACATCGTCTTTTGGAG
AATATCAACGAAACTGATATTCTCCATAATGCTTACATTTTTATCTCCCG
AAAAATTGGCGTGGATGAGTGTCATTTACACCTGAGACCAGTTTCGTTCG
AGTACGCACAAGCGAAAACTAACGCCAAAACAAAACCGCTCTCTTTGAAA
GAACTATTGGATGATGAGAGCCGAGTCGACAGGTAAGCATATGAACGCAA
TCACACTCTTCAAGTACTTTGCTGAtttttaccgagtttatgtatcggag
gatatcgagggcggcGGTAAGagaaatgatacaaaacaaagtcgatagtt
gatatacggctctatatcgccttttcTCGCCTAAACAGAcgtcgatttat
ctcgaatacataaacttgctttTAGTTCTCAGTGGGCTGTAGGAGCGTTG
AGCATcactttacaaaaaaataaaatgtaaatggGCTAAACCTGAAATCT
TGCTCAAAATTAGCTGGGAAAAAATCATGTCACTTTGCCAAAATGTGTCA
CcttctttggaaaattttagacTAAATATCCTTGTTATTCATCccaaaat
tctcttttttctaGATACATACCTAACAATTCCAGTCTAGGAATTTCTGA
GCTTGACGAAAAGCATGTTTCCGTGTTCAACTTTCGAAATCGTGAAGGGC
TTATCAATTTAGTGTCAACACCCAATTCATCAGAAAAAGTACGCGCAGCA
TTATCCGCCCAAATTTGTCAGAAATTTCTGCTGATGTCAGCAGTACAGCA
GGTGAATGGGAGCTATAATGAGATTCGAAGTGAAGAACAGCAGAGGTTGA
AAATGGAACAGAGTAGTTTTTTGATTGGATCATCGAGGAGTTCGAGTCAA
TCTTTGATTAAAACAAGCTTGCCATCACAGCTCAGTAAGCTCggaaattt
ctttgattttttatattaCGAAAACGGTCAATATAATATAACATACACTG
TAGTACAGTCACTCTGTTTAAAACGATCCTTTTTCTCAAACCAGTCACCG
CATTAAAGTCGCCATGATGAGAAATAAAGGTGTTTTCGGTCTTAGGCCTT
GCATCTAATCGATAAAGCTAAGGATACACTGATAACACTTTACAGTCTGC
TGCAACGCAATATACATTGCGttgtaaatttttctgaaatcacTCTACAA
CGCGatgaaaatattgcaaaaaaaattcaattcaaactGATTTCGTTCCA
AGCAAATTTGTTTGTTATTGAAGGtctttttatctattttgaTTGTACNA
CATCATGTTGTTGTTGGTGGTATAcccaaaaagcttaaaaatccttttag
taccatAAGGAAAAAGTGGTATCCAgactaaaatttgagaaatNGTTATT
GAAGGtctttttatctattttgaTTGTACATTTTTTGATGGTGGCTGCAC
TACAAAAAATCGCAGGTGGAAGTCGCCTGTAAAACTCAACAACGCAGCTT
TAGCTTAAAGATCTCTACAATACGTCTTTCTGATTACCGTATTTTCAACA
TTCCATTCATTATGTATCCAGAAAATTACTTGCTTACTTATTTTAGTGAT
ACCAATGACTCAGTCACAACAAATGTTCAACGAAAATCTTATCAACGATA
AACTCAAGCGATCTTTCTTATCCTTGCAAGCTGAAAAGTTAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005902XLOC_005902Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010520-exon-sc0000107-1491911889:278480..278663TCONS_00010520-exon-sc0000107-1491911889:278480..278663Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:278480..278663TCONS_00010520-exon-sc0000107-1510915933:278480..278663Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:278480..278663TCONS_00010520-exon-sc0000107-1575043694:278480..278663Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:279029..279319TCONS_00010520-exon-sc0000107-1491911889:279029..279319Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:279029..279319TCONS_00010520-exon-sc0000107-1510915933:279029..279319Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:279029..279319TCONS_00010520-exon-sc0000107-1575043694:279029..279319Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:279431..279571TCONS_00010520-exon-sc0000107-1491911889:279431..279571Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:279431..279571TCONS_00010520-exon-sc0000107-1510915933:279431..279571Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:279431..279571TCONS_00010520-exon-sc0000107-1575043694:279431..279571Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:279981..280163TCONS_00010520-exon-sc0000107-1491911889:279981..280163Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:279981..280163TCONS_00010520-exon-sc0000107-1510915933:279981..280163Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:279981..280163TCONS_00010520-exon-sc0000107-1575043694:279981..280163Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:281055..281176TCONS_00010520-exon-sc0000107-1491911889:281055..281176Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:281055..281176TCONS_00010520-exon-sc0000107-1510915933:281055..281176Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:281055..281176TCONS_00010520-exon-sc0000107-1575043694:281055..281176Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:281644..281905TCONS_00010520-exon-sc0000107-1491911889:281644..281905Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:281644..281905TCONS_00010520-exon-sc0000107-1510915933:281644..281905Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:281644..281905TCONS_00010520-exon-sc0000107-1575043694:281644..281905Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:282672..282985TCONS_00010520-exon-sc0000107-1491911889:282672..282985Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:282672..282985TCONS_00010520-exon-sc0000107-1510915933:282672..282985Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:282672..282985TCONS_00010520-exon-sc0000107-1575043694:282672..282985Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:283544..283820TCONS_00010520-exon-sc0000107-1491911889:283544..283820Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:283544..283820TCONS_00010520-exon-sc0000107-1510915933:283544..283820Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:283544..283820TCONS_00010520-exon-sc0000107-1575043694:283544..283820Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:286246..286798TCONS_00010520-exon-sc0000107-1491911889:286246..286798Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:286246..286798TCONS_00010520-exon-sc0000107-1510915933:286246..286798Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:286246..286798TCONS_00010520-exon-sc0000107-1575043694:286246..286798Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:287385..287661TCONS_00010520-exon-sc0000107-1491911889:287385..287661Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:287385..287661TCONS_00010520-exon-sc0000107-1510915933:287385..287661Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:287385..287661TCONS_00010520-exon-sc0000107-1575043694:287385..287661Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:288044..288363TCONS_00010520-exon-sc0000107-1491911889:288044..288363Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:288044..288363TCONS_00010520-exon-sc0000107-1510915933:288044..288363Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:288044..288363TCONS_00010520-exon-sc0000107-1575043694:288044..288363Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1491911889:289026..289121TCONS_00010520-exon-sc0000107-1491911889:289026..289121Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1510915933:289026..289121TCONS_00010520-exon-sc0000107-1510915933:289026..289121Clytia hemisphaericaexon
TCONS_00010520-exon-sc0000107-1575043694:289026..289121TCONS_00010520-exon-sc0000107-1575043694:289026..289121Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107supercontigsc0000107:278480..289121 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.48719	0.000497059	2.60771e-07	0.850805	0	0	2.87389e-10	0	2.53606e-08	1.44275	7.16319e-05	0	0.62748	0.69298	0	0.492139	0.494179	2.99824e-06	0.401755	0	0.705532	0.809574	0.839573	1.0209	0	0	3.09505e-10	0.781316	0.596642	1.00657e-08
Blast
[Close]
BLAST of TCONS_00010520 vs. Swiss-Prot (Human)
Match: CF183 (Putative uncharacterized protein C6orf183 OS=Homo sapiens GN=C6orf183 PE=5 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 2.195e-24
Identity = 76/269 (28.25%), Postives = 136/269 (50.56%), Query Frame = 2 
Query:    5 ILLECQDAYDRASRLSVCCEPLITSQPIPISMIKSEDLAIYTRWFVYYLHSIKKITHFIKVIEWLPQTKFLLSKKHDKLEEKKTVSNSNKKFTSRD---ESNGLVSPRFLSPRSFWKRDEKPTPVSETSKDIKP--LPSFSTEIEDFSKQLDVLLANYDIKMRCHQVENQSDGMDMYNLVIRKFKQHHFIQEQNRLFPIYDSETLENSKETKEKGHMTYKKESNWLAFIQILPDVYNTQKAALTKLKEQDAMDQLMFVQSKILSVKSSD 796
            I+ E  D   RA RLSV  E  +  +  P +++  EDL IYT+W V +LHS+  +  +++ +++LP +K +LS   +++ E       N+     D   +  G  SP           D   T +S   +      LP  +TE  +   QL +LL+++ I     ++ + +  M++++LV +KF+     Q++ ++FP  ++   +          MT KK++NW++FI+I P     QK  LTKLKE+   D L+ +Q+K L + + +
Sbjct:  151 IMQEYNDTLQRAERLSVARENFLMGKNNPPNLVTQEDLTIYTKWLVCHLHSLGTVHQYLQALQYLPISK-VLSVAFNRVAE---AGQKNENVCVNDIDPDIQGSASP-----------DPVDTSISGPMRTEAAFVLPQHATETGELKPQLKLLLSHFSIPYDVEELWDSAKEMELFSLVSQKFQSVFMEQQRLQMFPDCEAGIAKADNLGLAGPRMTLKKKANWISFIKIKPKCDPWQKKLLTKLKERRRTDALLQLQAKFLKISNPE 404
The following BLAST results are available for this feature:
BLAST of TCONS_00010520 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CF1832.195e-2428.25Putative uncharacterized protein C6orf183 OS=Homo ... [more]
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