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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010497 ID=TCONS_00010497|Name=TCONS_00010497|organism=Clytia hemisphaerica|type=transcript|length=1435bp
GCGTCGTTAAGTTTCTGTAGATCGACAGTTCGGCGGGGGTCCCCGTTTTT
CTTTGAGGTGACAATCATACGCGCACACCACTCGGTTGTGGTTCCTTGGG
GGATTTGCTCGATGATCTTGAGACGGACGTCGCGGTCGATgtcttctttg
actttttgtttcCAGTGGTGTGGGACGGGGATAGGCGTGTGAGCTGCGTA
AGGGTCTGCGTCTTCTTTAAGATGGAGTCGGATGGGTTCTCCTGTCATTG
TTGGTAGCTCCTGGTGAGGGCATTGGTTAAAAGCGGAATAGCCATGAACG
CGTCCAGGATCCACGATTTAAGCTTTGGAATGTTCTCTTGCGTTGGCTCG
AAGGGGATGTCTTCTGGGCGATTCGGCGGTGGCGTTCTCTCTTGGCAGTG
GCATTCGTCCGATTGTGACTCTGTGGAGGCGGAGATGCTTTTCGGGAAGG
ATTCGTTGACGATTCCCAAATCTTTCATGGCGGTTTGAGATAGGTAAAAA
CCTTTACAGTTTTTCGAAATGTAAACCATTTGACTCGATGAGCGCCCTCC
GTAAGTGATGTGGAGGAAGAGCGTGCCCAATATATCGAGAGGGCGTGAGT
GATGCCTACAATTTTATGTTTGGTTTTTACGAGGTAGGCGTAtgtgcatt
tcagtttatttaacAGTTCGGGTCAGGCAGTGCATGTTTGGCATCCGCTA
TCTGCTATAGCTTCGGTGAGTGTGTCCGTTATAATGGGGCCGTTCCTCTT
ACCAAACTGCCCGTGGGTCTGTTTGAGTATTTTGATGGACACGTCAATTT
TCGGTGGGCTTTCGGGGCGAGTTGGTGTGAACGAGTTGCCTCTCCATTCC
ATGTGGGAAGGAACGGTGGCGTTCGCTAGGGCCGGTTGTTCGAGGACGGG
GCAAGACGAAAATCCTCAGCGGGTGTTGCGAATGCGAAGGATGGCACGTC
CTTTAGTTGGCTTTCTTCTTGCTGTTGTGGGTGGGATGCTTCCCCGACGG
CGCTTGCTTGGGAACGACTCGCTGTGCCTTTCATACATACGGCGTGGAAA
TGACCCTTGATTCCGCAATTACCACAGTTCTTATTGAATGCTGGACAGTC
TTTGCGAGCCATGGTTTTACCTTCGTGCGAAGTGCGTCCGCAGCCTCTGC
AGGGGCGATTGGTCTTGCTATCATGGGGGCGATTGGTCTTGCTATCATGG
GGGCGATTGGTCTTGCTATCCATGTTGTTGTGGACGTCTGAATTGGTCTC
GTCTGTAGGTCGATTTGGCGAATGCGTTGGTGGAGCTGCTCGTCGGGGGG
TTGGCTCTCATGATGTCGGTTGATTGTTCTGTTGATTCGAGACATTGTAA
ACGTTCTATTTTGTCTCCTAACGTCGGCAGGGCTGCTGTTTCTGAGAGTA
TTCGGGACTGGTGTTGTTGGTTTCTCAGCCCGAAC Run BLAST on NCBI protein sequence of TCONS_00010497-protein >TCONS_00010497-protein ID=TCONS_00010497-protein|Name=TCONS_00010497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=134bp
VRAEKPTTPVPNTLRNSSPADVRRQNRTFTMSRINRTINRHHESQPPDEQ
LHQRIRQIDLQTRPIQTSTTTWIARPIAPMIARPIAPMIARPIAPAEAAD
ALRTKVKPWLAKTVQHSIRTVVIAESRVISTPYV Run BLAST on NCBI transcript from alignment at sc0000106:309414..310848 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010497 ID=TCONS_00010497|Name=TCONS_00010497|organism=Clytia hemisphaerica|type=transcript|length=1435bp|location=Sequence derived from alignment at sc0000106:309414..310848 (Clytia hemisphaerica)
GTTCGGGCTGAGAAACCAACAACACCAGTCCCGAATACTCTCAGAAACAG
CAGCCCTGCCGACGTTAGGAGACAAAATAGAACGTTTACAATGTCTCGAA
TCAACAGAACAATCAACCGACATCATGAGAGCCAACCCCCCGACGAGCAG
CTCCACCAACGCATTCGCCAAATCGACCTACAGACGAGACCAATTCAGAC
GTCCACAACAACATGGATAGCAAGACCAATCGCCCCCATGATAGCAAGAC
CAATCGCCCCCATGATAGCAAGACCAATCGCCCCTGCAGAGGCTGCGGAC
GCACTTCGCACGAAGGTAAAACCATGGCTCGCAAAGACTGTCCAGCATTC
AATAAGAACTGTGGTAATTGCGGAATCAAGGGTCATTTCCACGCCGTATG
TATGAAAGGCACAGCGAGTCGTTCCCAAGCAAGCGCCGTCGGGGAAGCAT
CCCACCCACAACAGCAAGAAGAAAGCCAACTAAAGGACGTGCCATCCTTC
GCATTCGCAACACCCGCTGAGGATTTTCGTCTTGCCCCGTCCTCGAACAA
CCGGCCCTAGCGAACGCCACCGTTCCTTCCCACATGGAATGGAGAGGCAA
CTCGTTCACACCAACTCGCCCCGAAAGCCCACCGAAAATTGACGTGTCCA
TCAAAATACTCAAACAGACCCACGGGCAGTTTGGTAAGAGGAACGGCCCC
ATTATAACGGACACACTCACCGAAGCTATAGCAGATAGCGGATGCCAAAC
ATGCACTGCCTGACCCGAACTgttaaataaactgaaatgcacaTACGCCT
ACCTCGTAAAAACCAAACATAAAATTGTAGGCATCACTCACGCCCTCTCG
ATATATTGGGCACGCTCTTCCTCCACATCACTTACGGAGGGCGCTCATCG
AGTCAAATGGTTTACATTTCGAAAAACTGTAAAGGTTTTTACCTATCTCA
AACCGCCATGAAAGATTTGGGAATCGTCAACGAATCCTTCCCGAAAAGCA
TCTCCGCCTCCACAGAGTCACAATCGGACGAATGCCACTGCCAAGAGAGA
ACGCCACCGCCGAATCGCCCAGAAGACATCCCCTTCGAGCCAACGCAAGA
GAACATTCCAAAGCTTAAATCGTGGATCCTGGACGCGTTCATGGCTATTC
CGCTTTTAACCAATGCCCTCACCAGGAGCTACCAACAATGACAGGAGAAC
CCATCCGACTCCATCTTAAAGAAGACGCAGACCCTTACGCAGCTCACACG
CCTATCCCCGTCCCACACCACTGgaaacaaaaagtcaaagaagacATCGA
CCGCGACGTCCGTCTCAAGATCATCGAGCAAATCCCCCAAGGAACCACAA
CCGAGTGGTGTGCGCGTATGATTGTCACCTCAAAGAAAAACGGGGACCCC
CGCCGAACTGTCGATCTACAGAAACTTAACGACGC Coding sequence (CDS) from alignment at sc0000106:309414..310848 >TCONS_00010497 ID=TCONS_00010497|Name=TCONS_00010497|organism=Clytia hemisphaerica|type=CDS|length=405bp|location=Sequence derived from alignment at sc0000106:309414..310848 (Clytia hemisphaerica)
GTTCGGGCTGAGAAACCAACAACACCAGTCCCGAATACTCTCAGAAACAG
CAGCCCTGCCGACGTTAGGAGACAAAATAGAACGTTTACAATGTCTCGAA
TCAACAGAACAATCAACCGACATCATGAGAGCCAACCCCCCGACGAGCAG
CTCCACCAACGCATTCGCCAAATCGACCTACAGACGAGACCAATTCAGAC
GTCCACAACAACATGGATAGCAAGACCAATCGCCCCCATGATAGCAAGAC
CAATCGCCCCCATGATAGCAAGACCAATCGCCCCTGCAGAGGCTGCGGAC
GCACTTCGCACGAAGGTAAAACCATGGCTCGCAAAGACTGTCCAGCATTC
AATAAGAACTGTGGTAATTGCGGAATCAAGGGTCATTTCCACGCCGTATG
TATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010497-exon-sc0000106-1491911889:309414..310848 | TCONS_00010497-exon-sc0000106-1491911889:309414..310848 | Clytia hemisphaerica | exon |
| TCONS_00010497-exon-sc0000106-1510915933:309414..310848 | TCONS_00010497-exon-sc0000106-1510915933:309414..310848 | Clytia hemisphaerica | exon |
| TCONS_00010497-exon-sc0000106-1575043694:309414..310848 | TCONS_00010497-exon-sc0000106-1575043694:309414..310848 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106 | supercontig | sc0000106:309414..310848 . |
Blast
The following BLAST results are available for this feature:
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