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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010490 ID=TCONS_00010490|Name=TCONS_00010490|organism=Clytia hemisphaerica|type=transcript|length=974bp
TGGTGGGCTCTTTTGAATGCAAGTGTTATTAACTCAAAATTTGAAGGATT
TGAAATCATTACCTTTGAAAAGTATCTTAAAGAAACCATACATTCCAACC
AGTTGCTAACCTCAGAACTGATAAAATATTATAGAACATTGAAAAATCAA
ATGACTAACGCAATATTGATAGGTGAAGTGTCTCTTTTATAAGAATCGTT
TCCAATAACGTTGCAAGTCATTGAAGGAACAAGAAGCCACATACCAGTTA
GCCTTTAGCAACCACCAAACCACCACCAGCAGTTAAATGAAGGGTAGAGG
AAAGTGACAAAGGTGACGTCATGTTTCTTATGGTTGAAGATGTTTGTCTT
TGTAGTCCTCAAGTGTTGTTGTTGTAACAATATTTGAATGTCTGTATTAC
GTTCTCGTGATGATACTCTAGTCTTCAGAGTATTTTAAGTCGTAACGTAG
GCTGTCATTCGTTTGGATAGATATTTATTTGCAGAAGATGTTGCATAATT
ATCTGCATCCTTGCATGATTTTATCAAGTGTTCGATTTTACAAGATGTAG
CTGTCAAAGAGATGATGACATGTGAATGTACAGAAACAGTGAAGTCGTTA
CGCATTATAAAAGTGAGAACTTCGACATTCGGAAAAGGCTTTTTCAATAT
CAAGTAGTCAATAATAGAAGTACACGGATACACAACAATTGTAGCAGGAA
CTCGCTTCGTAAACAAACTGAAGAACGGCAAGGTTTACACTTTTTCCTCC
AACCTCCACCCACGCCACCATTGGTCAACAAAACATGTAATTCATCAATC
ATAACAAccaacaatcaatcaatcataaCAACCATTTCAATGCAATGTTT
ATTATGTGGATAAAAGCACTCACTTCATCTACCCTAAACTTACTTGGACT
Aacgtaaaaatataaataatattttgtttttttcgttttcttttactttt
tctttttttgttgttgcgtttttt Run BLAST on NCBI transcript from alignment at sc0000106:225951..226924 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010490 ID=TCONS_00010490|Name=TCONS_00010490|organism=Clytia hemisphaerica|type=transcript|length=974bp|location=Sequence derived from alignment at sc0000106:225951..226924 (Clytia hemisphaerica)
aaaaaacgcaacaacaaaaaaagaaaaagtaaaagaaaacgaaaaaaaca
aaatattatttatatttttacgtTAGTCCAAGTAAGTTTAGGGTAGATGA
AGTGAGTGCTTTTATCCACATAATAAACATTGCATTGAAATGGTTGttat
gattgattgattgttggTTGTTATGATTGATGAATTACATGTTTTGTTGA
CCAATGGTGGCGTGGGTGGAGGTTGGAGGAAAAAGTGTAAACCTTGCCGT
TCTTCAGTTTGTTTACGAAGCGAGTTCCTGCTACAATTGTTGTGTATCCG
TGTACTTCTATTATTGACTACTTGATATTGAAAAAGCCTTTTCCGAATGT
CGAAGTTCTCACTTTTATAATGCGTAACGACTTCACTGTTTCTGTACATT
CACATGTCATCATCTCTTTGACAGCTACATCTTGTAAAATCGAACACTTG
ATAAAATCATGCAAGGATGCAGATAATTATGCAACATCTTCTGCAAATAA
ATATCTATCCAAACGAATGACAGCCTACGTTACGACTTAAAATACTCTGA
AGACTAGAGTATCATCACGAGAACGTAATACAGACATTCAAATATTGTTA
CAACAACAACACTTGAGGACTACAAAGACAAACATCTTCAACCATAAGAA
ACATGACGTCACCTTTGTCACTTTCCTCTACCCTTCATTTAACTGCTGGT
GGTGGTTTGGTGGTTGCTAAAGGCTAACTGGTATGTGGCTTCTTGTTCCT
TCAATGACTTGCAACGTTATTGGAAACGATTCTTATAAAAGAGACACTTC
ACCTATCAATATTGCGTTAGTCATTTGATTTTTCAATGTTCTATAATATT
TTATCAGTTCTGAGGTTAGCAACTGGTTGGAATGTATGGTTTCTTTAAGA
TACTTTTCAAAGGTAATGATTTCAAATCCTTCAAATTTTGAGTTAATAAC
ACTTGCATTCAAAAGAGCCCACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010490-exon-sc0000106-1491911889:225951..226924 | TCONS_00010490-exon-sc0000106-1491911889:225951..226924 | Clytia hemisphaerica | exon |
| TCONS_00010490-exon-sc0000106-1510915933:225951..226924 | TCONS_00010490-exon-sc0000106-1510915933:225951..226924 | Clytia hemisphaerica | exon |
| TCONS_00010490-exon-sc0000106-1575043694:225951..226924 | TCONS_00010490-exon-sc0000106-1575043694:225951..226924 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106 | supercontig | sc0000106:225951..226924 . |
Blast
The following BLAST results are available for this feature:
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