TCONS_00010489 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010489
Unique NameTCONS_00010489
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length152

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010489 ID=TCONS_00010489|Name=TCONS_00010489|organism=Clytia hemisphaerica|type=transcript|length=152bp
AGCTTGTACGTAGTCCACTTTATGGTGAAGATCAATCGTGTAAGAATAAC
GATCGAATCGCTGGGCTCACCAAATTGTTTGATGCATGGGCACGTGTGGC
AAAATTGTTTaacattgaatattttttgacatatGGATCGTTAATCGGAG
CG
Run BLAST on NCBI

transcript from alignment at sc0000106:219345..219496

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010489 ID=TCONS_00010489|Name=TCONS_00010489|organism=Clytia hemisphaerica|type=transcript|length=152bp|location=Sequence derived from alignment at sc0000106:219345..219496 (Clytia hemisphaerica)
CGCTCCGATTAACGATCCatatgtcaaaaaatattcaatgttAAACAATT
TTGCCACACGTGCCCATGCATCAAACAATTTGGTGAGCCCAGCGATTCGA
TCGTTATTCTTACACGATTGATCTTCACCATAAAGTGGACTACGTACAAG
CT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005877XLOC_005877Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010489-exon-sc0000106-1491911889:219345..219496TCONS_00010489-exon-sc0000106-1491911889:219345..219496Clytia hemisphaericaexon
TCONS_00010489-exon-sc0000106-1510915933:219345..219496TCONS_00010489-exon-sc0000106-1510915933:219345..219496Clytia hemisphaericaexon
TCONS_00010489-exon-sc0000106-1575043694:219345..219496TCONS_00010489-exon-sc0000106-1575043694:219345..219496Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000106supercontigsc0000106:219345..219496 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010489 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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