|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010405 ID=TCONS_00010405|Name=TCONS_00010405|organism=Clytia hemisphaerica|type=transcript|length=2525bp
TTTCGCGTTTATGAAGAAGTCTTCACCGAAGAGCAAACAGCAAAgagaag
ttcatttttgtaattttataaCAAAATGGCCGACAGTAGAATTCTGCTAA
TGTTTTGTGTAGCTTTTAAAAAAGACTTTTATTTTGatgagaattttgaa
atttgttaaAGAGGTTTcatggtaGATAGATTAAAGAATTAAAGAGAAAT
GTCACTGAGCAAAAACTTAACAGTGGAACCTAGGGAAGATGAACCAAGTC
ATTCAGACAACATGACATCCATATCACATTCTTTGGAGAACGCTGAACCT
GTCCAAACCAATGCACAGATATTACTGACGCAAGACGGAATCGTTTGGGC
ACCAGGTGAAACGTTGATGCTGACACAGGATGAGATACAAAGCTTACACG
AGTCTGGTGTCGCCCACATAAGACAAAATGAAAGTGGCACTGAATATGGG
TTGAAAGTTAATGCAGATCGCTCTTTGAATTCTGACGACGAACAAAGGAT
TCCCTGTTCTGTAGAATCATGTGTTGTGGCAGATACTTTCACTATTGAGC
CGCCGGTCATTGAAAGTCGTCAAGAAATCAATTATGCTAACAATTTGACA
CAATTCCAAGTACAAATGTCAATAGGTGACATGAACCATTTGCAAAAGAT
CACCAACGAAAATGTTTTGATGAGTCAAGCAGTCATACATGACGATAGCA
TGAGAAAACAAGAGTTTCTCTCGCCAAATACTTCCATGCAAAGAGCTAAA
AATGATATAGTGGGCGAATCGAAACAGTTTCTATCTAATGATTCGTCAAA
TATAATTTCGGAGGATAGAAATGATCTGTTTATCAAAAACGAATTAAGAG
AAAGCAAACAACATATTGATAAATCAAAAGGGAATGTGAAATCCGAATGT
TCTTCATCACGTGTTGCCAAAAAAGAAGTGACAGTTGATGGGACGAGTGA
TGCAATGACTTCCATCGTATACATGCATCTAGCGGATGATGATTCAGAAG
AAATGGTTACGCAACAAACAGACCATGCAATCGATATGCAAAAGTGCAAT
CAAAAGGAAGAATTTCTGAATGATGCTTCAATTAAAAGTAATTCTGCTGA
AAGTATAGTCTCTAAAACCGATGCTTCGCACGGAACTTATATCAATGTCG
ACAAAAGCAATTTGAGAACACTTGCTCCAAGACTTCAAACGTTACCACTT
TATGCTGGGGCACATGCTAGTCTAGGGATTGGAAAGTCACTTTTAAAACC
AATAAACTATCCTTCGAACACCGTACCACTTTTAGAGTCTggtcaatttt
ttgaagttttgggACGATGTACACATTGTTTTCGTTTTAGTCGTACGATT
TCTTACTGTCGTTCTGAAAAAAACCATCGCGAGCCAAAGGCCAACGTTTG
CGGGGACTGTGAGCAACTTGGCTTGAGTACCGTCGTTTGTCGGCGTAAAC
GTAACCATACGGCACCGAACGCTCAACCTTTGAATATCGTGATCAACACC
GCGTTACAAATTCCTGATAACGTCAAGCAATTGTGTATGCGAAATTATTT
GCCATCCTGCTTTGCAGAATTGCACAGCATAGTGATCCATCATGCGGACA
TAACCTTTGTTGCACCCAGAAGGAAATCTTGTCCAGCTGATGAAGAGCAG
TCGACAACTGATAAAGTCGCCAATATGCGCAAACCAACTGATTACGCGCG
TGGTTATCTTTACCCATACACACCAGAAAGGTGGAAACAATGGCTGAAAG
ACTTTTCAACAGAAACGGGCACAAATTACCGTATTCGAACCGGAAAACGC
GTCAATAAAAAGATGGATCATCACGGACTGGCTAACCACAACGGTAATAT
CATTTCATACAGTACCATAGAAACCCAACTCTATAATTGTGCTTTGGGTG
GTCGTCCTAGAAAGCGAAAACATGTAGAGTCGATACCAAAGCGTAAAGAG
AGAGAATCCAAATTGATTGGATGTTCTGCAGTGATTCATACGAGATTGCT
GGAAACGAAAGACGGCTGGAAAAGTCTGGAGGTTACTGTTCCAAAACTTT
CAGCACATCTACCATTTCACGACCCAAAAGAATCGGTAGAGGATGAGAGC
ATTGTACAAACTATTGATCATTTTAACCCACCATTGAACTCGCCATCAAA
TGAAAACCTCACTACGACCGAGTTCTTTGATATTGATGTTCAAACTTCAA
AAATGACTACTGTCAACGAAAAAGAGACTTTAATGAATGAAACACGTAAA
AACATAAAACAGTTATTGCTGACTTCTGCAAGCCTCATTGATTCCATTGA
CAATCCCAATGTGCTGGAAGATATTCAAGTCCAATCACAAGACTTCttcg
aaaacattttcaaagaagCAAAATCAGcgaagaaaatgaaaaggagTAGA
AATTCGAACAGTAAAGTCTCCATCTCTAACGAAAGTGATATtgattaaat
tattttattaaaattatattaaagGGAATTCTTGTAAAGCTCGTGAAACA
AGTTAATAATCTCACTGATAATTTA Run BLAST on NCBI protein sequence of TCONS_00010405-protein >TCONS_00010405-protein ID=TCONS_00010405-protein|Name=TCONS_00010405-protein|organism=Clytia hemisphaerica|type=polypeptide|length=749bp
MSLSKNLTVEPREDEPSHSDNMTSISHSLENAEPVQTNAQILLTQDGIVW
APGETLMLTQDEIQSLHESGVAHIRQNESGTEYGLKVNADRSLNSDDEQR
IPCSVESCVVADTFTIEPPVIESRQEINYANNLTQFQVQMSIGDMNHLQK
ITNENVLMSQAVIHDDSMRKQEFLSPNTSMQRAKNDIVGESKQFLSNDSS
NIISEDRNDLFIKNELRESKQHIDKSKGNVKSECSSSRVAKKEVTVDGTS
DAMTSIVYMHLADDDSEEMVTQQTDHAIDMQKCNQKEEFLNDASIKSNSA
ESIVSKTDASHGTYINVDKSNLRTLAPRLQTLPLYAGAHASLGIGKSLLK
PINYPSNTVPLLESGQFFEVLGRCTHCFRFSRTISYCRSEKNHREPKANV
CGDCEQLGLSTVVCRRKRNHTAPNAQPLNIVINTALQIPDNVKQLCMRNY
LPSCFAELHSIVIHHADITFVAPRRKSCPADEEQSTTDKVANMRKPTDYA
RGYLYPYTPERWKQWLKDFSTETGTNYRIRTGKRVNKKMDHHGLANHNGN
IISYSTIETQLYNCALGGRPRKRKHVESIPKRKERESKLIGCSAVIHTRL
LETKDGWKSLEVTVPKLSAHLPFHDPKESVEDESIVQTIDHFNPPLNSPS
NENLTTTEFFDIDVQTSKMTTVNEKETLMNETRKNIKQLLLTSASLIDSI
DNPNVLEDIQVQSQDFFENIFKEAKSAKKMKRSRNSNSKVSISNESDID Run BLAST on NCBI transcript from alignment at sc0000106:174895..184845+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010405 ID=TCONS_00010405|Name=TCONS_00010405|organism=Clytia hemisphaerica|type=transcript|length=9951bp|location=Sequence derived from alignment at sc0000106:174895..184845+ (Clytia hemisphaerica)
TTTCGCGTTTATGAAGAAGTCTTCACCGAAGAGCAAACAGCAAAgagaag
ttcatttttgtaattttataaCAAAATGGCCGACAGTAGAATTCTGCTAA
TGTTTTGTGTAGCTTTTAAAAAAGACTTTTATTTTGatgagaattttgaa
atttgttaaAGAGGTTTcatggtaagttaattatgtgtcaTTGTATGGGT
TGCCAAGATTGAGACTCGAAAGGTTCacaaaaaaagacaatttttagTTC
TTTGGCTCAGCTGACCATACAatacgaccctggacaccgtCGTACATCGT
ATGGTGTTGTCCGGTGGGTGTACGGTGGGAACAAGTCAACCTATTTTGAC
CACTGTACAAGGTACGTACGCCGGCTACACTGTACCGTGACAGTAGACCT
GTTCTTGTTTCTGAAACAATTCTGATTGGGTAATTTGCATCAGTGCCAGT
Aggggaggctaacatgcatagccctcaacaatatgaaagacctggctggt
cattaaaatgcaaaattaaatcaaaacaaaaattacaagttaccccaatc
tcacggtacgtCCAATGTACGGTGGGAGCGATTCCTCAAAGATTTATTCC
CGGTGTAGCCGCCTTTGACTGAGGAGAAAACAAACCACACGAAAAAAGAT
TGAACCTGATCAGACTTACTAAGATTGTTTTCTGAGTCCAGGGGGAgggc
cggaaaattttcgaaaaattaacaagcagggggCCCGTTTacttggcacc
taagagtaggtAGAAACATGCCACCCtaccagttagtcacactaggaaat
ctagctttcagaaaaaacaacatcagtcatctacaggatacatttcaaca
acaaggatgagagttacctgaatcaagttcgcaagacaataataattaaa
actaaaagttggaaacaaaataaaacatgcagcagccaaaatcaaccaac
taaaatttgtcataccataattcccgagacagcgcttcaatttttaaggc
cttgtttatacgctaaagtaaaacaattacacacatgtaaatgggtcatt
gtttgaggtccggcaaaatttccgggagatagcctttccggcggtgcgcg
gatccaGGTGGGTTctgcctcccccgtagatctttttcttggaaagttga
tcttcaaattagttttcaacgttggcttggctcaaattttttcaactaTG
Gcacaaattttaggcaatttctcaaagttcgcctgaaaatgttaatttca
ttaaaaagcgccgggttattttttcatgaatccctttagaagttttgcgg
cgcatttttttgcttgactacAGTGAAACAAAACAGTTTCTCCAAAAATC
AGTTATGTCtgcaacaaaaagttatgtccgcaacaaatcATGAAGTTTTC
TCAACCTCCAAACACCAATTTTaggtttctttgacaaattaaTGCATCTA
AGGTCATTTTAAGTTGGTTACAACcagaaaaaagtttcataatTTTCCAT
TGGCAAGGTTTCCAGTTTATTTACTTCTTTCATATGTATTTCATGTTGCA
GACATAGCTATTTTGTCTAAAATGTTGTTGATAAAGTGTATTTGCAAGCT
GGCATGATGTTTTATTATACGATctattagaaatagaaaacaaatactCT
GATGTCAAGTTAAggtccaaaatgaaaattttaacagaaaaataaacctt
ttgtttctttgaaaatgatggttCTGAACCTGTGAGCTTGAATAAAGAAT
AAATCATGCATTAATTTGCATATTAAATTCATTGTGTAGTGTTCACACAA
CATAATCTACTACACATTCACTTACAGACTAGTTAGAATTGCTCCAATTA
GTTCAAAACAGAGTCATATTCCATTAGCAAAttgtatgttgcggacataa
ctatttaaagtatttatcagatttttaacCCTCTTAAGCAGTTATGCTAA
CACCTTGACAATACTAAATTACATTTGTAAGTACCATATGCATTTActtg
cttttttcaatttttcctctAGGGTTGTTCTTCTATTAGAAATATTAGAA
AGTTTTAATATCATTGTGGagtcttcttttgtttttttcatgaagaaaaa
catgtaataactgaaatcaaaccaaaccaaatcttttggttttatattga
tttagtctcaaatattccttaaattttgGAAACAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAAAAGACactccaaaattttaaataaatga
tGTAAAATGTTCTATGGTTCTACCctggaagaaaaaaagttatgtccgca
acatagcATTATTACCCATTTTTAaccctttctattgaaaagGTTACTGA
TTATGAAGATGTACAACAGTTAATgtcaagctcaaaatttaacttttaaa
attagattatgacaaaaaatgatatatgattggattttattttacagata
gatcttcaattttcaggaaatcatagttacgaagacctttcaagacaaca
aatttcaatgattaagtTTTGGTTCAAGTACAGCAAAGTATTAAAAGCCG
AATAATTACTCAGTTTAATGTTTATTGCTgattttaaagtaaatttgaca
aaaagttatgtccgcaaccaacaaggtttcatattctaattttttattga
tcaactgaaatatagcaaacttttggtttttttgaaaacttataatgagt
ccttcaaatctagaatgaaGTTACCTGATCATagccagttttcttttcat
gaaatcaaactttattggaatattttttaatattttagattttcgtCTGG
AAATAAGTGCCAGAATTTGAAAAGTATAACATACTGGAcggtaaaaattg
cttttcaatgCAGCTTAATATATTAGCCATGGACTGAAATCCAAGACAAG
TATTAGATTAGCATATTTTATCTCAAATGAAGTGTAAACAACAGaaagtt
ttttgccaaatttgtctgATAATAACTACTCTAGGTCAAATGTCTGGACC
AAGCCAGTTTGATTAAGCCCTGATatttatgttttctgaaaattgaagtc
attaataaaaatattatccaggaataaaaatgtaattcaaaactttattt
ttaccaaattttttcACCTATTTGGGTGACATTACCAGATTCATGCTCAT
ATACAATGTACGGTGGTGTCCAGGGTCGTGCTCAGCTCAGGACAATTTTT
TGTTCCAATTTGGATCGCCTTTAAACTAATCTATCTCACCACTATGATAA
GCAAATCTAAATTTTGGATCTTTTATTTTACCAACAAACAGTCAAGAACA
TATATCTTTTCATAAGTTGCAGCTCAAAAATGtatttaccgtcaactgct
ctaacttgggactatttgacaaaacatgggacggccattatACCGAACcc
ccaaagtcatttgatttgagttatgAGCAGtgcttaaaaaatacacgatt
tctctttcgcacagagtaggcttttaaatcaaattgtgaaaaaaaatccg
tagtagTGGAACACACACGAGTGTCTAGAaggaagaagaacaaattagta
ccgttaagtcgggtaacttgcatcagtggagggaaacttgcatagccatc
aaatgattgaccaatcaaagcaacaaaatttcaaaacaattgaaCTACGT
AGCTCTGCTCGcaactctactctaccatttttgttttgatttaattttgt
attttaatgaccagctgggtcattcatttgagggctatgcatgttagcct
ccactgatgcaagttacctgatctcatgGTAGCAAAACGATGGagggttt
gacgtcactcgcgtggCAAGTTACTCACTATGTGTTAATCCCATCAGACG
ATAGGCGGTTAGATGGCGGaggttctctaattctccaatcagcgtTNcat
gttatgacagaaagtatgattgataaacttggtggagttatcaaaacaaa
tttgttgtcaaagagatttaacagtaagtgaaaaaacaggccagatatca
acagtcccatgttttgaccaatcgtctcccaagttagagcagttgacggt
aaccaTGGCATGACTAGAAATGGTGCAAAAACACCCATTTTTTGTACAAT
TGATTTGAAAGTGTCCGTTAAGACTcttcagcactgcatactgcaccctg
gctagGTAGATTGAATTGCCTAGCATCTTGCGTGTGTTAAAAAATACACC
AACCTAAATTCGCGTATATACCGTAAGATGGTCTaataatgttgacatcc
ctcatctaatttcgacacccttctttcaAGATAGGAAAAAGGAAGGTCAG
AAACACTGATTGACTCCCCAACTGATTGCTGAGCAAACAAGATGagtttc
aatcagcaattctgaccttcttattattgattatttcctatctctaaaga
aggccTGTGACGAAATTCACAGGAAAAAGTATGGAAATCACATGCTTGGT
AAAACTGATTTCCGAGCATGTGATCCTGAAAagaatcacatgcgtgtgaa
aatgcAATTCACAAGCCATCTTTTCTCAACTTAAATGGAGTGTCTGACTA
GATCTAAAATCACAAATAGGATTGTTTGTCTTTCTTAGAGAGAGAGGTTT
AATACCCTAAAAGTAACTcacttctattctatttaacAGTGAGAAAAGAA
GGATCGTGAATTACATTTTCACAcgaatgtgattttttgcaggatcacat
gctcggaaattggttttcacacgcatgtgattcacggattttttcctgtg
attaGAAGAGCCAGGTAAACATTACCAGCTTACGATATTTCTCTGAATAT
AAAAGCGTTAAAAATACATTAACCTAATTCGTATTTCTCTGcctaaaaaa
gctttaataaaaatatatgccaatcttattttttgtttttttgttttcag
gtaGATAGATTAAAGAATTAAAGAGAAATGTCACTGAGCAAAAACTTAAC
AGTGGAACCTAGGGAAGATGAACCAAGTCATTCAGACAACATGACATCCA
TATCACATTCTTTGGAGAACGCTGAACCTGTCCAAACCAATGCACAGATA
TTACTGACGCAAGACGGAATCGTTTGGGCACCAGGTAAAATCTGCAGTAA
GatcttttttagtcaaagcttTTGCAGTTGAGGCACGCAATCAATTTTTC
ACCACCACCGTCCTTTTTGCTGAAATCAGTCCTAGGATACGGTATCCAGG
GATTCGAAAATGCTATTGACTTAAGATTTTAATAAGTGTTAGGTATTGGA
AATGCAAGCTTATAGCCAAAATTCCATCAAAATTAGACCAGGGAAGTGCT
GAAAGTGATCATTTTAGGACCGGTCTGGAAAGTACCAAACACGCTCGGAA
ACAAATTTCTCCATTAactttctcttttatttgacaaaatAGCCTTCATA
ATTGTTCTGAAagaaatttcaatcaaatctaACGAGGTTATCGGTTAATA
TTTGATTTTACCCAAATTTACTTTTTGGTTCCGGATATTTGTCCATCTAG
ACCAGGCCTAAAACTCATcaaataacaacaaaataagaacGTTGATGATG
CTCGCGAGAGTATTcttaagtgtttttttttcgttttaacaAGCAAAGGT
GTTTTTAAGAGTAAGTCCACTATATTTCCCCCAAACGATAAGGCATAAGA
GGGTTTTCTTCCTGAAACTATAGAGATAATAAAAGTTAGATGGAGtaaca
acttttctgtaatagcGAGAGAAGTtataaaactctttagaaatttcttt
caaatcggcctcctttgattaccaatccttgatagcaaaaatcagtcaag
atatagattataagaactaaagtaaagttattctgtccaacgaaacctcg
tatttttaggtaaaatgcgaatttttttcgagtaataatttctttatagt
tttgaaagaagtttttattttatcgggaaactttcgagaggtaaactttt
gcgaattctttgttgtttgtggaaggttctttgctataaatatctttaga
tctaaaatagcagctgcctcaaaattttgatagaatatagttgaaagatt
ggtattaaagtctgtccagatataattggcagtggaaacaaaaaggcctg
taacttttgatagtcaaatttaattatggaaattttttttgattgtttta
gagaatcaaaagcgctatatttgaatgtatttttggttgaaaaattcgca
atttttagtggttaaatttgcgattgcaaaaattgagcgttttttctact
tatgctataacgttcatttttacatcagtggtagttcaaccttagcttaa
gaagtttcttaaatttcaaggcaaacagaaaagcccttcggaagatatgg
gacccgaaataccccttggtagcacttttctgtgaaatatcaaatctcca
acttattacttaaAACGGGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATTACttaaaacgggggtagtgatatgattgataaaa
cagtttttcgatcataacacattttacgatctttttaatgacctcatagc
caaactgtgtttggtattttgggaattagcaaagttctttaatggcttaa
aaataacaaaggcaatataagttcatgcttatcttttcaataaaagcaat
tatactgtgatttcacttcgtttcgaaataatccaTGATACCAATAGTAT
CAATgaaccaacacttaacattttccaacttttaattgcactgttcaaaa
aacaTGATAACatataacccccgtttttagtaataagttggagatttgat
atttcacagaaaagtgctaccaaggggtatttcgggtcccatatcttccg
aaggacttttctgtttcccttgaaatttaagaaacttcttaacctaaggt
tgaactaccactgatgtaaaaatgaacgttatagcataagtagaaaaaaa
gctcaatttttgcaatcgcaaatttaaccactaaaaatcgcgaatttttc
aagcaaaaatacatttaaatataacgcttttgattctctaaaacaagcaa
aaaaaatttccataattatatttgactatcaaaagttacaggcattcttg
tttccactgccaattatatctggacagactttagtaaatATGtagaaatt
gaccaaatttgccgaggattccctgagcagcgaacatttcaaattcgata
ttctgtgcttattcttgcaaggttttcttatgttttataaacaaaactgt
catcacaagatgaacaaattaaaaatgtagcgtgcttttattcaaattct
cttcAACTCAAGTATTATCTCATGGGAAAGCAAAGTTCATGGCTTTTTNt
atgttttataaacaaaactgtcatcacaagatgaacaaattaaaaatgta
gcgtgcttttattcaaattctcttcAACTCAAGTATTATCTCATGGGAAA
GCAAAGTTCatggctttttcccaaagcaacaaagcaacagtttgctatca
acgatacaatacaatagaatagtaggagtggtatctccatctatattttt
attatctcCATGCTGAAACCAATTAGGGAAGAAATTATGCTGAAATACTA
TTCACCAAGTCGTTGTCTTTTTCATTTCCAGGTGAAACGTTGATGCTGAC
ACAGGATGAGATACAAAGCTTACACGAGTCTGGTGTCGCCCACATAAGAC
AAAATGAAAGTGGCACTGAATATGGGTTGAAAGTTAATGCAGATCGCTCT
TTGAATTCTGACGACGAACAAAGGATTCCCTGTTCTGTAGAATCATGTGT
TGTGGCAGATACTTTCACTATTGAGCCGCCGGTCATTGAAAGTCGTCAAG
AAATCAATTATGCTAACAATTTGACACAATTCCAAGTACAAATGTCAATA
GGTGACATGAACCATTTGCAAAAGATCACCAACGAAAATGTTTTGATGAG
TCAAGCAGTCATACATGACGATAGCATGAGAAAACAAGAGTTTCTCTCGC
CAAATACTTCCATGCAAAGAGCTAAAAATGATATAGTGGGCGAATCGAAA
CAGTTTCTATCTAATGATTCGTCAAATATAATTTCGGAGGATAGAAATGA
TCTGTTTATCAAAAACGAATTAAGAGAAAGCAAACAACATATTGATAAAT
CAAAAGGGAATGTGAAATCCGAATGTTCTTCATCACGTGTTGCCAAAAAA
GAAGTGACAGTTGATGGGACGAGTGATGCAATGACTTCCATCGTATACAT
GCATCTAGCGGATGATGATTCAGAAGAAATGGTTACGCAACAAACAGACC
ATGCAATCGATATGCAAAAGTGCAATCAAAAGGAAGAATTTCTGAATGAT
GCTTCAATTAAAAGTAATTCTGCTGAAAGTATAGTCTCTAAAACCGATGC
TTCGCACGGAACTTATATCAATGTCGACAAAAGCAATTTGAGAACACTTG
CTCCAAGACTTCAAACGTTACCACTTTATGCTGGGGCACATGCTAGTCTA
GGGATTGGAAAGTCACTTTTAAAACCAATAAACTATCCTTCGAACACCGT
ACCACTTTTAGAGTCTggtcaattttttgaagttttgggACGATGTACAC
ATTGTTTTCGTTTTAGTCGTACGATTTCTTACTGTCGTTCTGAAAAAAAC
CATCGCGAGCCAAAGGCCAACGTTTGCGGGGACTGTGAGCAACTTGGCTT
GAGTACCGTCGTTTGTCGGCGTAAACGTAACCATACGGCACCGAACGCTC
AACCTTTGAATATCGTGATCAACACCGCGTTACAAATTCCTGATAACGTC
AAGCAATTGTGTATGCGAAATTATTTGCCATCCTGCTTTGCAGAATTGCA
CAGCATAGTGATCCATCATGCGGACATAACCTTTGTTGCACCCAGAAGGA
AATCTTGTCCAGCTGATGAAGAGCAGTCGACAACTGATAAAGTCGCCAAT
ATGCGCAAACCAACTGATTACGCGCGTGGTTATCTTTACCCATACACACC
AGAAAGGTGGAAACAATGGCTGAAAGACTTTTCAACAGAAACGGGCACAA
ATTACCGTATTCGAACCGGAAAACGCGTCAATAAAAAGATGGATCATCAC
GGACTGGCTAACCACAACGGTAATATCATTTCATACAGTACCATAGAAAC
CCAACTCTATAATTGTGCTTTGGGTGGTCGTCCTAGAAAGCGAAAACATG
TAGAGTCGATACCAAAGCGTAAAGAGAGAGAATCCAAATTGATTGGATGT
TCTGCAGTGATTCATACGAGATTGCTGGAAACGAAAGACGGCTGGAAAAG
TCTGGAGGTTACTGTTCCAAAACTTTCAGCACATCTACCATTTCACGACC
CAAAAGAATCGGTAGAGGATGAGAGCATTGTACAAACTATTGATCATTTT
AACCCACCATTGAACTCGCCATCAAATGAAAACCTCACTACGACCGAGTT
CTTTGATATTGATGTTCAAACTTCAAAAATGACTACTGTCAACGAAAAAG
AGACTTTAATGAATGAAACACGTAAAAACATAAAACAGTTATTGCTGACT
TCTGCAAGCCTCATTGATTCCATTGACAATCCCAATGTGCTGGAAGATAT
TCAAGTCCAATCACAAGACTTCttcgaaaacattttcaaagaagCAAAAT
CAGcgaagaaaatgaaaaggagTAGAAATTCGAACAGTAAAGTCTCCATC
TCTAACGAAAGTGATATtgattaaattattttattaaaattatattaaag
GGAATTCTTGTAAAGCTCGTGAAACAAGTTAATAATCTCACTGATAATTT
A Coding sequence (CDS) from alignment at sc0000106:174895..184845+ >TCONS_00010405 ID=TCONS_00010405|Name=TCONS_00010405|organism=Clytia hemisphaerica|type=CDS|length=4500bp|location=Sequence derived from alignment at sc0000106:174895..184845+ (Clytia hemisphaerica)
ATGTCACTGAGCAAAAACTTAACAGTGGAACCTAGGGAAGATGAACCAAG
TCATTCAGACAACATGACATCCATATCACATTCTTTGGAGAACGCTGAAC
CTGTCCAAACCAATGCACAGATATTACTGACGCAAGACGGAATCGTTTGG
GCACCAGGTGAAACGTTGATGCTGACACAGGATGAGATACAAAGCTTACA
CGAGTCTGGTGTCGCCCACATAAGACAAAATGAAAGTGGCACTGAATATG
GGTTGAAAGTTAATGCAGATCGCTCTTTGAATTCTGACGACGAACAAAGG
ATTCCCTGTTCTGTAGAATCATGTGTTGTGGCAGATACTTTCACTATTGA
GCCGCCGGTCATTGAAAGTCGTCAAGAAATCAATTATGCTAACAATTTGA
CACAATTCCAAGTACAAATGTCAATAGGTGACATGAACCATTTGCAAAAG
ATCACCAACGAAAATGTTTTGATGAGTCAAGCAGTCATACATGACGATAG
CATGAGAAAACAAGAGTTTCTCTCGCCAAATACTTCCATGCAAAGAGCTA
AAAATGATATAGTGGGCGAATCGAAACAGTTTCTATCTAATGATTCGTCA
AATATAATTTCGGAGGATAGAAATGATCTGTTTATCAAAAACGAATTAAG
AGAAAGCAAACAACATATTGATAAATCAAAAGGGAATGTGAAATCCGAAT
GTTCTTCATCACGTGTTGCCAAAAAAGAAGTGACAGTTGATGGGACGAGT
GATGCAATGACTTCCATCGTATACATGCATCTAGCGGATGATGATTCAGA
AGAAATGGTTACGCAACAAACAGACCATGCAATCGATATGCAAAAGTGCA
ATCAAAAGGAAGAATTTCTGAATGATGCTTCAATTAAAAGTAATTCTGCT
GAAAGTATAGTCTCTAAAACCGATGCTTCGCACGGAACTTATATCAATGT
CGACAAAAGCAATTTGAGAACACTTGCTCCAAGACTTCAAACGTTACCAC
TTTATGCTGGGGCACATGCTAGTCTAGGGATTGGAAAGTCACTTTTAAAA
CCAATAAACTATCCTTCGAACACCGTACCACTTTTAGAGTCTggtcaatt
ttttgaagttttgggACGATGTACACATTGTTTTCGTTTTAGTCGTACGA
TTTCTTACTGTCGTTCTGAAAAAAACCATCGCGAGCCAAAGGCCAACGTT
TGCGGGGACTGTGAGCAACTTGGCTTGAGTACCGTCGTTTGTCGGCGTAA
ACGTAACCATACGGCACCGAACGCTCAACCTTTGAATATCGTGATCAACA
CCGCGTTACAAATTCCTGATAACGTCAAGCAATTGTGTATGCGAAATTAT
TTGCCATCCTGCTTTGCAGAATTGCACAGCATAGTGATCCATCATGCGGA
CATAACCTTTGTTGCACCCAGAAGGAAATCTTGTCCAGCTGATGAAGAGC
AGTCGACAACTGATAAAGTCGCCAATATGCGCAAACCAACTGATTACGCG
CGTGGTTATCTTTACCCATACACACCAGAAAGGTGGAAACAATGGCTGAA
AGACTTTTCAACAGAAACGGGCACAAATTACCGTATTCGAACCGGAAAAC
GCGTCAATAAAAAGATGGATCATCACGGACTGGCTAACCACAACGGTAAT
ATCATTTCATACAGTACCATAGAAACCCAACTCTATAATTGTGCTTTGGG
TGGTCGTCCTAGAAAGCGAAAACATGTAGAGTCGATACCAAAGCGTAAAG
AGAGAGAATCCAAATTGATTGGATGTTCTGCAGTGATTCATACGAGATTG
CTGGAAACGAAAGACGGCTGGAAAAGTCTGGAGGTTACTGTTCCAAAACT
TTCAGCACATCTACCATTTCACGACCCAAAAGAATCGGTAGAGGATGAGA
GCATTGTACAAACTATTGATCATTTTAACCCACCATTGAACTCGCCATCA
AATGAAAACCTCACTACGACCGAGTTCTTTGATATTGATGTTCAAACTTC
AAAAATGACTACTGTCAACGAAAAAGAGACTTTAATGAATGAAACACGTA
AAAACATAAAACAGTTATTGCTGACTTCTGCAAGCCTCATTGATTCCATT
GACAATCCCAATGTGCTGGAAGATATTCAAGTCCAATCACAAGACTTCtt
cgaaaacattttcaaagaagCAAAATCAGcgaagaaaatgaaaaggagTA
GAAATTCGAACAGTAAAGTCTCCATCTCTAACGAAAGTGATATtgattaa
ATGTCACTGAGCAAAAACTTAACAGTGGAACCTAGGGAAGATGAACCAAG
TCATTCAGACAACATGACATCCATATCACATTCTTTGGAGAACGCTGAAC
CTGTCCAAACCAATGCACAGATATTACTGACGCAAGACGGAATCGTTTGG
GCACCAGGTGAAACGTTGATGCTGACACAGGATGAGATACAAAGCTTACA
CGAGTCTGGTGTCGCCCACATAAGACAAAATGAAAGTGGCACTGAATATG
GGTTGAAAGTTAATGCAGATCGCTCTTTGAATTCTGACGACGAACAAAGG
ATTCCCTGTTCTGTAGAATCATGTGTTGTGGCAGATACTTTCACTATTGA
GCCGCCGGTCATTGAAAGTCGTCAAGAAATCAATTATGCTAACAATTTGA
CACAATTCCAAGTACAAATGTCAATAGGTGACATGAACCATTTGCAAAAG
ATCACCAACGAAAATGTTTTGATGAGTCAAGCAGTCATACATGACGATAG
CATGAGAAAACAAGAGTTTCTCTCGCCAAATACTTCCATGCAAAGAGCTA
AAAATGATATAGTGGGCGAATCGAAACAGTTTCTATCTAATGATTCGTCA
AATATAATTTCGGAGGATAGAAATGATCTGTTTATCAAAAACGAATTAAG
AGAAAGCAAACAACATATTGATAAATCAAAAGGGAATGTGAAATCCGAAT
GTTCTTCATCACGTGTTGCCAAAAAAGAAGTGACAGTTGATGGGACGAGT
GATGCAATGACTTCCATCGTATACATGCATCTAGCGGATGATGATTCAGA
AGAAATGGTTACGCAACAAACAGACCATGCAATCGATATGCAAAAGTGCA
ATCAAAAGGAAGAATTTCTGAATGATGCTTCAATTAAAAGTAATTCTGCT
GAAAGTATAGTCTCTAAAACCGATGCTTCGCACGGAACTTATATCAATGT
CGACAAAAGCAATTTGAGAACACTTGCTCCAAGACTTCAAACGTTACCAC
TTTATGCTGGGGCACATGCTAGTCTAGGGATTGGAAAGTCACTTTTAAAA
CCAATAAACTATCCTTCGAACACCGTACCACTTTTAGAGTCTggtcaatt
ttttgaagttttgggACGATGTACACATTGTTTTCGTTTTAGTCGTACGA
TTTCTTACTGTCGTTCTGAAAAAAACCATCGCGAGCCAAAGGCCAACGTT
TGCGGGGACTGTGAGCAACTTGGCTTGAGTACCGTCGTTTGTCGGCGTAA
ACGTAACCATACGGCACCGAACGCTCAACCTTTGAATATCGTGATCAACA
CCGCGTTACAAATTCCTGATAACGTCAAGCAATTGTGTATGCGAAATTAT
TTGCCATCCTGCTTTGCAGAATTGCACAGCATAGTGATCCATCATGCGGA
CATAACCTTTGTTGCACCCAGAAGGAAATCTTGTCCAGCTGATGAAGAGC
AGTCGACAACTGATAAAGTCGCCAATATGCGCAAACCAACTGATTACGCG
CGTGGTTATCTTTACCCATACACACCAGAAAGGTGGAAACAATGGCTGAA
AGACTTTTCAACAGAAACGGGCACAAATTACCGTATTCGAACCGGAAAAC
GCGTCAATAAAAAGATGGATCATCACGGACTGGCTAACCACAACGGTAAT
ATCATTTCATACAGTACCATAGAAACCCAACTCTATAATTGTGCTTTGGG
TGGTCGTCCTAGAAAGCGAAAACATGTAGAGTCGATACCAAAGCGTAAAG
AGAGAGAATCCAAATTGATTGGATGTTCTGCAGTGATTCATACGAGATTG
CTGGAAACGAAAGACGGCTGGAAAAGTCTGGAGGTTACTGTTCCAAAACT
TTCAGCACATCTACCATTTCACGACCCAAAAGAATCGGTAGAGGATGAGA
GCATTGTACAAACTATTGATCATTTTAACCCACCATTGAACTCGCCATCA
AATGAAAACCTCACTACGACCGAGTTCTTTGATATTGATGTTCAAACTTC
AAAAATGACTACTGTCAACGAAAAAGAGACTTTAATGAATGAAACACGTA
AAAACATAAAACAGTTATTGCTGACTTCTGCAAGCCTCATTGATTCCATT
GACAATCCCAATGTGCTGGAAGATATTCAAGTCCAATCACAAGACTTCtt
cgaaaacattttcaaagaagCAAAATCAGcgaagaaaatgaaaaggagTA
GAAATTCGAACAGTAAAGTCTCCATCTCTAACGAAAGTGATATtgattaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010405-exon-sc0000106-1491911889:174895..175065 | TCONS_00010405-exon-sc0000106-1491911889:174895..175065 | Clytia hemisphaerica | exon |
| TCONS_00010405-exon-sc0000106-1510915933:174895..175065 | TCONS_00010405-exon-sc0000106-1510915933:174895..175065 | Clytia hemisphaerica | exon |
| TCONS_00010405-exon-sc0000106-1575043694:174895..175065 | TCONS_00010405-exon-sc0000106-1575043694:174895..175065 | Clytia hemisphaerica | exon |
| TCONS_00010405-exon-sc0000106-1491911889:179895..180078 | TCONS_00010405-exon-sc0000106-1491911889:179895..180078 | Clytia hemisphaerica | exon |
| TCONS_00010405-exon-sc0000106-1510915933:179895..180078 | TCONS_00010405-exon-sc0000106-1510915933:179895..180078 | Clytia hemisphaerica | exon |
| TCONS_00010405-exon-sc0000106-1575043694:179895..180078 | TCONS_00010405-exon-sc0000106-1575043694:179895..180078 | Clytia hemisphaerica | exon |
| TCONS_00010405-exon-sc0000106-1491911889:182676..184845 | TCONS_00010405-exon-sc0000106-1491911889:182676..184845 | Clytia hemisphaerica | exon |
| TCONS_00010405-exon-sc0000106-1510915933:182676..184845 | TCONS_00010405-exon-sc0000106-1510915933:182676..184845 | Clytia hemisphaerica | exon |
| TCONS_00010405-exon-sc0000106-1575043694:182676..184845 | TCONS_00010405-exon-sc0000106-1575043694:182676..184845 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106 | supercontig | sc0000106:174895..184845 + |
Blast
The following BLAST results are available for this feature:
|
