TCONS_00010401 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010401
Unique NameTCONS_00010401
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2685

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010401 ID=TCONS_00010401|Name=TCONS_00010401|organism=Clytia hemisphaerica|type=transcript|length=2685bp
CAAAGTGaactgaaattaattttttacttaatttttcttttctagaaATA
GTATTACAGTAACACACATAATTATACCATAAAGGATGAACTGGGAAGAT
TTAAAGCCATCATTCAAATGGAATTTGTTACTAAAAGGGACTTTCATTCA
ATCTGATTTTGAAGTTATTTTTTCCTCGAAATGCGATCGTCGACCATGCG
CTACTAATGATCTAGAAATGGAAAAACGCTGGCAAGAAATATGTGAAGAA
AATCCTCGTATATATAATGGAAGTAAATTTCGACTGCATAATGTTTTACA
AAAAGACGGGAAAGTTGTGATCGAGGTCGGCGTGACAGATTATAAAAGCT
TTTTATGTACCAACCCTTCTGAGAGTGTCAAACTTCTCTACGATTATGGA
TTAAAACATCATGAGAGCAAGAAAGCATGTTTTGCAGATCCGATAGGCGT
GAATTGTGTGGTAAAGACAAAGGATGATCGTATTGTGTTGATGAAACGTG
CTGATTGGGTTGGTGAAGCTAAAGGTTTATTTGATACACCTGGTGGTCAT
GCAGAACCTGAGGAAATGTTACAAAAGTTGGGACTTAGCATTGAAAGAGT
TTATGAAGCTGACGGGAAACATGTTAtcgatgaaattttcaattccATCG
TACGTGAGATAAGAGACGAGctgaatATACCAGAAGAAGTCATCGAACGC
CCGACGTTGATAGGGATCATAGGTAACAAAGAACTAGCTGAGAAACCTTG
TTTTTGCTTCACTGTAAGATGTGATTTATCAGCCAAAGATATTGAGGATT
ATTACATAAAAGGGGGAGCAGAAACAGACGAGTCAACCGAACTCATATTT
ATCCCTAAACAAgaGTTGCAATCTCTAAAAGATTCGAAATGGAGAGAAGT
TTTGACACGAATGGCGCCCTCTGGTCAAGCCGGTATCTTTTTATCATTGA
CAAATGATAAATGATCAGCACAATCTATTGGGAGCAGGGATAATGATTGA
ACGAATTATGCTCAAAACACTCTTGTTTTACATGAataaaaagtattgaa
aataatttcttgaaattcaaaaatcactttttttgtttcaagttgaaaat
aaaatattcatAGAGTGGATATGAATTATTTAGTGAAATTTTTGAGAAGT
TATTTTGTTTCATTCAAATCGAAATCACCAAGGCTCTGAAGTTAATACAG
TGACGACTACataggaaaaaacaacaaagatattttcaaattttcaagat
gGCGCACTATGCAAGACGGAAGGGTAAAATGTCTTTTCAAAAGAGGGAAG
AAGAACGAATGTGGAAAGACCATTTATCCAAACATAAGAACAATGTGAAA
TCAGTCAAGCCCACTattgtaaataaaaatgaaatggatAAACATATTCA
TACCAGATTGAAGCTCAAACGATTACAGcttCATGAAGACAGAATTGCCA
CAATTGATTACGAGAATCGCCGTTTGTTGGAAAACATTACGCGCATCGAA
AACAAGTCTAATCCTGATTATTATAACAAACCGTATTTGGAGAAGCTTGA
TGCAGAGGGTGAAGGCCCGTCATTCTCCTCTTCCGAAtcggaaagcgaaa
gtgaaagtgaatcAGAATCGGAACACGCGGAAAGCGAGGATGAATCGACA
AAAGCAGAAAGGAGAAGGtcgaaaagagaagaaaaagaaaaactaagaCA
ACGTAAAAAAGAAGCAAAGGAAGCTAAGCGTGAAGCAGCTTTGGAAGaat
tccagagaaaaaatttaatgaatgaGCTTGGTGCGGATACGCTAAAAGAC
GAAAATGAGAAGCTTGACCGTCATTTACGGAGAACTCTCAAAAGTCTGCA
GAAGAGTGAAAACAATGATGGAAGTATTGAAGCAATCAAAAAGGCTCAAG
AAGCATTACGCCAAGAAATGGAGGCAATGGAGTTGGACAGTGACGCAAAA
GATCCAAAATCTTCACGGTGTGAGGACGAGAGAATAAAAGAGAATCGCCG
TCTACACCACAAACTGCAAGACATTCAAAAAGGAAAAGGTCGCAAGAAAC
CCGATGATCCAGAAGGCTTATCCCGATGGTGGGTGACTTCACCACGTGGG
AAAGACAAGACGGAATATCAGAGAGAAAGACAAAAATTAATGGAAGACCT
TAAAATACAGAAGGAGAAAAAGAGAATTGAACGagagaaagaagagaaag
agctgattaagaaaaaacaagaagaaagtcaaaaagaaaaggAGAAACTG
CCTGAAGGATATCGCAAGAAACGACGAAAGAAGAAATCTGTGATTGATGA
TCCAGACATGGCTGGCGAAACGAAAGAAGAGGAAGAGTTACCCGATGTCA
GCATCTTGTCCAAAGATCCTTATAATGAAAATAATGATGGAGCTAGCCGT
ACTGGAAAGGCCGAAACTAAAGCGCAAACGAAAAAGGCGATTGATAAAAA
GGTTGCTCGGAAAGCAAAGAAGTATTAATTGCGGAAGAATAGATTCTTGA
ACGATTACAAGCTAATTCTGAGGAAAGATTAATAAATGGAAAGAGAAATT
TACATGCATTTTGTATGCATTTTTCTAAATGTTTAAATTCCGGTGTGATA
CTTCTACagctttaaaaaaagtgtaattttacattttggatttaattttt
ataaatttgtacCTTGGCTAAAGGGTTCCCTGATT
Run BLAST on NCBI

transcript from alignment at sc0000106:153627..169181+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010401 ID=TCONS_00010401|Name=TCONS_00010401|organism=Clytia hemisphaerica|type=transcript|length=15555bp|location=Sequence derived from alignment at sc0000106:153627..169181+ (Clytia hemisphaerica)
CAAAGTGaactgaaattaattttttacttaatttttcttttctagaaATA
GTATTACAGTAACACACATAATTATACCATAAAGGATGAACTGGGAAGAT
TTAAAGCCATCATTCAAATGGAATTTGTTACTAAAAGGGACTTTCATTCA
ATCTGATTTTGAAGTTATTTTTTCCTCGAAATGCGATCGTCGACCATGCG
CTACTAATGATCTAGAAATGGAAAAACGCTGGCAAGAAATATGTGAAGAA
AATCCTCGTATATATAATGGAAGTAAATTTCGACTGCATAATGTTTTACA
AAAAGACGGGAAAGTTGTGATCGAGGTCGGCGTGACAGATTATAAAAGCT
TTTTATGTACCAACCCTTCTGAGAGTGTCAAACTTCTCTACGATTATGGA
TTAAAACATCATGAGAGCAAGAAAGCATGTTTTGCAGATCCGATAGGCGT
GAATTGTGTGGTAAAGACAAAGGATGATCGTATTGTGTTGATGAAACGTG
CTGATTGGGTTGGTGAAGCTAAAGGTTTATTTGATACACCTGGTGGTCAT
GCAGAACCTGAGGTAAAATTATTGTAGAAATGCTGTTTAGTTCAACTCTT
TCGTTCCTCATCCTCATTATTGGACCTACCGTGTTTTCAGGATCCGTCAA
attttgggtattgccattttgcattattgtgcaaaaaatcagaaaagaat
taatgagccaatcccaagGAAAGCTGACatcagacggacgaacgaataTG
GGTTAATTCATGACCCTGTCACATTTTCCGGAGAAAATAGCttgagccac
tttttagagaaccttgccctctgCTTTTATgtataaacttaaaaaatagt
aTTGAAGCAGTTTTGCACAAGGcggtttttttcaaaatagcttTACAAAG
GTTTTGTTAAGTTATCATTACAGGAAAGAAAGGTCGGAGTGTTCACCTTT
GTCAGGTAGGCTCTATCGGTATGTATGTAGCTTGTTTTGTGTCTCTACCT
ACTTTGTTTTTAACGAGTTTACAATTAAATGAAGAACTACTTTCACTTTG
TAGGAAATGTTACAAAAGTTGGGACTTAGCATTGAAAGAGTTTATGAAGC
TGACGGGAAACATGTTAtcgatgaaattttcaattccATCGTACGTGAGA
TAAGAGACGAGGTGATATAATCTATACGCTTTCTTTATAAAGATAACTTC
TAAAAAAACACACAAGTATAGAATAGAATACCTTAGAATACCTCCATAGT
TCATTTAATTTAATAAAGATGGCTGGGTTGTTAGGATATTTTAATCAGAT
TGATATTTTGTAAACCTATGTATggtctcaaaaataatcaaatatttttt
gtagctgaatATACCAGAAGAAGTCATCGAACGCCCGACGTTGATAGGGA
TCATAGGTAACAAAGAACTAGCTGAGAAACCTTGTTTTTGCTTCACTGTA
AGgtattgatttttatgttttcatgaGATGAGATATTTTTATTTGGGTGG
CACGTATAGGCAATGACTTCAAATGATTTCGTGGCATACCTATATgataa
tacgcttaaatcgcGTAACTCTCCCTTTCTCGCATGAAGCTTTTTCGCTA
GGGATTTTTAAGCATCCGGCAATTTCTTTGGCGCCTTTTTATATTGATCT
TCCCATTGGTCAATTTTTAGCCTGAAAATGAAAGCTGCCAACATGTaatt
tttcgtttctttttctaatcttcttttttaacatttataAGAGCGTTTTG
AAATTGAACACTCGTTATCTGTTTCTTTTTCTGTTATCTAATTTTCAAAG
TtattcatatttttaaaatcgaTCTCGAATTtctagccacgatggctaat
GTACTCCANtcatattttttaaatcaaccTCGAATTtctagccacgatgg
ctaatGTAATAGCAAAAGAATAGTTTTACACGACACTCTTGATTGTGGTA
GATTTTAGCAATGCAAGATATTCTTTCCTTGCAAATAGATTGAAGAAATG
GCAGTTTCGATTCGATTTACTTTTAAAATAACTACCGGGtgtttcattaa
aaagtgaACATGTTTGAAGTGAGGTTGTGAGAAAACTGTTATAAATCTAA
TATTTTCACcatcagaaagaggaaaggttaacttaaattttgaactatca
tactttaaatttgcttcacgttttcaaaagttatgaagaaaattggaaaa
agttcTCTTTCGAAAAAGCGTAATTTTTGAGTAAAGTGTATTTTAATTAT
GTATTTATCTATGAACAGCagaaaaagtgcatttttaGTTGCTTTCTTAC
ATGCTACCCGCCTTTCTAGGAATCGCACCAGCGATTGTATTAAATGGAAA
TAGAATTATGGCGTAGATTTTGGATGCTTAGATTCCTGGGCTTATACATC
GTATAAAGTTAAAATTTCCTGCTCTGTTTTGAGATTTAAATAACAGACCC
TTCGTATTCATATCTTATGCTTGCATCCTTACATCTTTTATTCTAGATGT
GATTTATCAGCCAAAGATATTGAGGATTATTACATAAAAGGGGGAGCAGA
AACAGACGAGTCAACCGAACTCATATTTATCCCTAAACAAGTATGTATAA
ATCTGATATTGCGATCCTTTGAAGAAAATAGAATCACCAAATTATTACAA
GAACTAGCTGAAATAAAATTTGAGTTCTGGTGTATTTAGCTTCCCTACAG
AAACCTTCTTTTGCATTATAAAACGAAAAATTTGTATTTAGCCATAtatc
agtaaattttttttttacaggaGTTGCAATCTCTAAAAGATTCGAAATGG
AGAGAAGTTTTGACACGAATGGCGCCCTCTGGTCAAGCCGGTATCTTTTT
ATCATTGACAAATGATAAATGATCAGCACAATCTATTGGGAGCAGGGATA
ATGATTGAACGAATTATGCTCAAAACACTCTTGTTTTACATGAataaaaa
gtattgaaaataatttcttgaaattcaaaaatcactttttttgtttcaag
ttgaaaataaaatattcatAGAGTGGATATGAATTATTTAGTGAAATTTT
TGAGAAGTTATTTTGTTTCATTCAAATCGAAATCACCAAGGCTCTGAAGT
TAATACAGTGACGACTACataggaaaaaacaacaaagatattttcaaatt
ttcaagatgGCGCACTATGCAAGACGGAAGGGTAAAATGTCTTTTCAAAA
GAGGGAAGAAGAACGAATGTGGAAAGACCATTTATCCAAACATAAGAACA
ATGTATGTGCAGTTTTCATTATTAATGAAATCCTTTTAAAAACTGTGAAT
AAAACGATTGCTGTGGCATGTTTTACTGTGTATTAAGCTATTAAGAAAGT
GACTTTTGGTATGTTAAAGagttgcttcacttttttcttttctattgcAG
GTGAAATCAGTCAAGCCCACTattgtaaataaaaatgaaatggatAAACA
TATTCATACCAGATTGAAGCTCAAACGATTACAGGTCTGTGAATCTGTTC
ATAAACTTGTATTTCAAGGTCGGAAATTTCCTACAATGACCACTTAATTC
GCAAAAAAATGATTCCCAAGGATTTCATTACAAActtgttctcaacttca
gttgagctagaatctgagaatgtgtgtgtgtgtatgtcccaaaactttca
TAGTGGGAACCCCCCCTaactttaggggggggggttggaggttttcagaa
aaatttaagcagGTGGGGGTTAGCCTGCTCACAAATCTTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGGGGGGGTTGGGTCGGtagcatttttcaggtgggggttacccta
tgcaggtgggggtgactttattcaggtgggggttggaggggtgctgccca
ctatgactttggggcagcctggagacttcaaaaattgttccatttggctg
aaatttggcacacttgttccttgggtgaatatctgggggtaattttttca
ttttttgaaaattttgatttttggagcctgggaacgagtttttcgccaaa
acgaggctaaaactttggggcagcctagagacttcaaaaattgtttgatt
acagtatatggcccccaaaacggagacggcccctaaaacggaggttttca
ttaaaataaagattctgacttgtagatttatcagaattaaacgatttttg
tttattttgaaagaatgatggttatacttaaaaatgagcatgtttttgct
ggtttgagacagattcaaaataacatatttgcgtctaaaggaaatatttt
aacaccaaaattagataaaaattgcatataactctNNNNNNNNNNNNgga
tattgaaaataagttatgaaaacgggatataggaaactttctacacctaa
tgccgttcagaaaatgcaaatacatctgtgactttagaggctgagTAAAA
GATATaacatcttgaaggtcaaccagtattttggagccctagaatcagca
ttgacaaaaccgAAAATtttaaatatgagaaaaagcaaaaaatcttggaa
ttctattcctatcaccttgagttaatagtttataacaaaaaattaacatt
atatataaaaattctcgctgaatcagcaaaaacggtaAATTCggtcattt
ttttacaaaatataggagaaaaatatctttaatgcttaatattttcactt
tcagtaaagctttttttctcaaattttcacagcttattccatacatgaat
tgaactattttcaaaaacttgattaaccCTTTGACTCCGCTGTCGATCGC
TGTTTTTGACTCTACAGCGCGCAgtggtttttcataaaaagtcaCCTTTT
ACGCAAACCGGTAtaacttttaaacaaaacaacTTCAGCTAAAAAGTTAT
ATATCTTTGAAAAGGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAATATCATTGCTTAAATGACCATACATATAAAAGACGCGTATACGCGTC
CCTCGTATATAGGCGCGGACGCACATGTGCGTCCCGCGTGGGCTAAGggt
taagacgttgttaaatcaaaattgtcattttgaaaatttctaaattttca
gtttggacttggcaatatcgaaaatcttgaaaattttcataaaaatcata
aattttactaccatcgggtcgtaaatttttaaagggaaaacacaaatatg
ttcatagtttttccccctattaccactgagcttaataatttgattttaac
tacacctccgttttgggggccccaaacctgcattttgacaaccaggggta
tactgtaaaaaatttatcaaataaatttatgcccacaaccctctaaatca
tatttcaaaactatggtcaaaattttgtattcatatcttaaagatatctc
gagaaatcgctaaaatttcaaacctccgttttgggggccattagaaaaaa
gctacctatctttaagcgattgaaaaatattgttgaaattaaaaattttg
aaaaagaacttccaggaaataaagtaaagatgttaaaggttttcatgcag
caaaattttttgtaaaatctcttttcctctatagatttgagagaaatttc
aaatttgatcgccgttttgggggccacatactgtaggctgaaatttggca
cacttctttcttgggtgaatatctgcaggtgttttttttcatttttcaaa
aattttgatttttggggcctggggacgagttttttgccaaaacgaggcta
aaactttggggcagcctggagacttcaaaaatggtcgcatttagctgaaa
tttggcacacttgttccttgggtgaatatctgggggtctacaattgggcc
tatgaatagtttgaagccactgaagttgagcccagtgcgttgtgCACGTT
CGACTATACTTGAATCATCCGTTAGGTGAAACGTTGGAAAAAGTTTATTA
TAAGTTTACGAGTTCATTGTAACAAATAACCAATCTAAATAACGGGCACT
TCATTCTGTGCGCATCACGCCCTACTATGAAAGGATTCGTCAAATGTGAT
TATCCGACAATCTGCGGCGATGCTTCCGCTTGAAAACGAGCTTGAAAACT
TTCGATTGATTCTTAGTACTTTTGAGCTCTTAAGTAGAAGCTTTTCCAAG
AATTCAGCCTAGACATGCTTTAAAGCTTAAACTACCTTTCGAGAGGAAAC
GTATAGCGTGACTAACGAAATTTAATGACTGCTAAAATTCATGACATCAA
ACGATATTTAATGATGAAAATCTTCAGTAAGACCACTGTATTCTGAATGG
GAAGGGTACTGTCTGTCATATATCCATCTTCCGATCTGACGATATCTTCA
GATACCTATACGATTGATTTtactttcttattttttttcagcttCATGAA
GACAGAATTGCCACAATTGATTACGAGAATCGCCGTTTGTTGGAAAACAT
TACGCGCATCGAAAACAAGTCTAATCCTGATTATTATAACAAACCGTATT
TGTAAGATAATCCTTCGAAGTTTCTTCAAAATGGCAACCCATTTTTCATC
CTAATCCATGTTTTTAGGCAGCAGTTGAAAAGCCAGTTGTTATCTTATCT
GTTAAACAAGAGGTTTCAATAATTTAAACTTGTGTTTTTCTGTTCTAGGG
AGAAGCTTGATGCAGAGGGTGAAGGCCCGTCATTCTCCGTAAGTATCTTA
TGTAGTAGAATTGTAACAAAACCTTTCATGTGAAATTattttgcccaaaa
tgagtTTTCCATCAATTACTTCTCGGTTAAAACATCTTTTAATTATGGCT
CTTTGGTAGATagaattcttcttttttccaGTCTTCCGAAtcggaaagcg
aaagtgaaagtgaatcAGAATCGGAACACGCGGAAAGCGAGGTAAGGAAT
GGATTTTCAGTATACTGGACAATTCAAGTAACCGACTCTACCAGAACGAA
TTCGGACTTGTCCCCCCCTCATTGACTTCTGTTTATCAATCGTTGGTATT
TGTTGATCAATCATTTACTCTTCACCCAATGTTGATGTTGATTGAATGTC
AAAGTGTGCCTGGACAATTTACCTTGACCTTGTGCGCCCCATGTTATGAT
GCgaagaacattttcaattcGATGTCATTGATGTCATCCGTTATCTTTTC
TGTTgtataaatgaaaacaaaacaacaatgtCCCTTTCCAACCGAGCTAT
CTCACCGTCTTTCGAGTAGACATTAACTGACATTTTTGAATCTTGAAAAT
CCTTCGGTCTTTGAGcttttctttcttcatttgtTTGGTTTCAGGATGAA
TCGACAAAAGCAGAAAGGAGAAGGtcgaaaagagaagaaaaagaaaaact
aagaCAACGTAAAAAAGAAGCAAAGGTATGGACAATGTATGAATCGCTTC
AATTAACGAAGAACAAATTTTTGTAGCCTTTATTGGCTTTTTCTATTGGC
ATTTAGTTATATAGTTTAGATGTAGGTAAAAAAGAAACAGAAGGTTGCAG
CTATCAGATGAATTattgaaaatctttcaatttttattttcctttgaTAT
TCAGGAAGCTAAGCGTGAAGCAGCTTTGGAAGaattccagagaaaaaatt
taatgaatgaGCTTGGTGCGGATACGCTAAAAGACGAAAATGAGAAGCTT
GACCGTCATTTACGGAGAACTCTCAAAAGTCTGCAGAAGAGTGAAAACAA
TGATGGAAGGTGTGTAAATATCCAAGCGTGTTTTTCAGTTATTGTAATTA
CAGTCAATAGGTACGGCTGGAGAGATATTCGTTTCTGACCATAGTGGCCT
ATTCGAGCATTAGTATTTGTTCATTTGTCTTAAGTATGCATCAATATTTG
CTTAAATTGCTATTATTCAACAAAAATTTCGATATCAAAAATTagtcaga
aagaaaagacacttttttattctgctactggcagtttcatacCGCTTTtt
gtgacaatcttcaggcaactaaaaataaaaaatagacttTACattatcta
tttaaaaaaaacaattcaatagcTTCATTTTATATGAcgtcaatatttca
aaaattatacatctttgaaaagataattcaaagTATAATTTTTGAGAAGA
GTAACttcaaaatgacaatgaaaatgaagaagaaaaaaatgaacttttta
tacTTTCTTTCTTCCTTTTTAGTTTAGAGTTACTTTAGAGTCTCATGATT
TCAGATATAAATGTCATTTGCTCTGCATTGATTTTTCAGTATTGAAGCAA
TCAAAAAGGCTCAAGAAGCATTACGCCAAGAAATGGAGGTGACTTTCTAA
TAATTGAATTTGCTTGTTCTTACCGACAAATTTAAATAAACagtagaatt
tgaaaaatttgataaattaaaatattttttgtaccAGTCTATCGATGCAT
TTTGTAGGAAGAAAAACCTTCTTTAGAAATACACTTTTGTAAGTACTGTA
GATGTTTTTGCGAGTTAAACATGCTGACATTAAAACATCAACAACAATTG
TTCTAATTTCAACGTAAACTCAACGAGAACTTATTGGCCAAAATAAGTCC
CTTCCTATCGAGGTATTCGattacaatttttattttttcattgaacTCCC
ATGTTAGGCAATGGAGTTGGACAGTGACGCAAAAGATCCAAAATCTTCAC
GGTGTGAGGACGAGAGAATAAAAGAGAATCGCCGTCTACACCACAAACTG
CAAGACATTCAAAAAGGAAAAGGTCGCAAGAAACCCGATGATCCAGAAGG
CTTATCCCGATGGTTTGtatttgattctttaaagagATCCACATAATCAT
TAAATGAATACTGACTAAAGAAGTGTTAACGTATATTTCAACTACATGGG
TTGTAAAGAAGCACAAATtcgttaaaatattttcttcaaatattgTCAGA
AGGGAAGTTTCGTCCTTGCGAAGCCTTATCCCATCAAAATACCTtcttgt
cattacttttttcaacGACGATCTGCAGTAATGATTTGAAATGACGCAAT
TAATAGTTACAGCCAGAATAGcatcaaaattataaattgaACGAGGGATT
CTCCCTAAATTGAAGCGATTTCAATGTCAATAGATTTTTAGCGTCacttc
tttcaaaagaaatccaatccaacgtcagaaaaaaatagCCCTGAGATTGA
TTCCTTTGTGATTCCTCTTTTATCGATAACTTTTATTTGCAACTTGTCCA
ATTTACGATTTTAGCGAGTTTTCTTCTTAGAATCAGCCGCTTAACAAACT
AtgtgaaaatgtaaaatatctGGTTATCTCAAGTGGCGGGTCTGAGGGAA
TTTGTAATTTACAGTAATTGGCCCACACAGTATTAAATCGacgtaaattt
ttgttttgagacaAAGTGAAGAAAGGTTCTTCTTTGTTGGAAGTCTTCCT
TCTGTGAATATTTTGGTATATACTTGtatgtattttatatttttcatcct
ACATAAGGAAATTATAAGTTGTGAACTACCTCAGATCCGCCACTGAATCT
CTTTAAGAATTGAAATCACAGTCTTTTTATTTCTCATCCTTCTNTCCGCC
ACTGAATCTCTTTAAGAATTGAAATCACAGCCTTTTTATTTCTCATCCTT
CAAGGTGGGTGACTTCACCACGTGGGAAAGACAAGACGGAATATCAGAGA
GAAAGACAAAAATTAATGGAAGACCTTAAAATACAGAAGGAGAAAAAGAG
AATTGAACGagagaaagaagagaaagaggTAAACAAATCTTTCACATACA
TtaatggtttttttctttttgtattttgccATAAGAAGAAAGCcctaaaa
ttcatcaaaatttctcaaaataagaCACAATAGAACAGATTCAGCCTGTC
ATTCGTTAAGATTAGCTTTGCCGAAGTTAAAAAGTTTGATCATTCACCat
aaaataagttctcgccaaaattaaaaatgttctGGATTTTTGCTgcacgc
taaaattagttcacGCCAAAATATAAAAGTTCCCTTATAATTTGACGTTG
TCACAGCCTTTTTGATCAGTAATTTTCAGAAGTAGCCAATTAAGGGGAAC
AAATGACACTTTACTGCACCGAATTAGTTATAACATTTGAGTTTAGTTTA
TCAACAATTTGAAGCATCGAGAGCCATGCCTAAGGGAAATCTTCTGACCA
TGATGCTGATTAATATAAACATTCTGATCAGATGGTATATTAAGTATTTT
AAGTATATAATATTTAAACGATTGCAACCACATAATGTCTCAAGTAAAGA
TGTGGCGGTACAATGCCTAACATTTAAACAAAGCAGACTTGAAGTTCAAA
GTGTGTCCAAAAAGCGTTTAATCACGTTATAAAAATCTGAATATATGATA
GTCTCAGGTGCCTTATAAATGCAATTAGGACTCAcccgtttattgaaatt
ttagttttaacaCCCCTTCCCCAAAAGACACCTACAAGTATATTTGGCTA
CCTTAAGGGTATATATTTTCCCGGgtactaaatttcgcgaatgtCACTTT
CTGGAACTTTTCGcctgtattaaatttcgcgattttgtgtttttgaaaaa
tttaaacagtactATAGTTCGTGAAATTTTACCTAAAAACTCGTAAAATT
AAGTACCTGCGAAAAATTAGTACACCCGTGAAAATTTAGTACCCGCAAAA
ATATGTACATGTACAATAGAATGGGTGTGGTGTTTGAATCTAGCTGAAAA
AGTTCTTTGAGCGAGGAAATTTCCAGCGGActccccccttttttaagggg
gggggggtggtgaCACCTTCTGAACTAATGAAGAAGGGGAATCAGAAGTT
TTCACGAAAAAagggggatagcaaggaaggggggagggcttacatatata
ttgtagattattttcaagcactggTATGAAAATTGGTCTTCACgaaaagg
aagttttctgttagagtagtctgagtcaaaaagaagaaagaagtttatta
tttcgctttctctttctaaagatatttcacatatatttgttagTTATTTT
TGtcggcataccggataagtgggggggaacctgggaacctaaagtaggaa
cctaaatgaacacctgaaaagtgggatgggggaacctaagtgggaaccta
aatgaacacctgaaaagtgggatgggggaacctaaagtgggaaNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNctttatgtatttgtttttaaagaaaaataa
taataataacaaattaggttcccactttaggttcccgggttcccccatcc
cacttttcaggtaaaaaatactttaggcgtacaaactttcgcgaacagaa
actttcgcgaggacgaaaaatcgcgaaattcacgacatttactttcgcta
atatttttcgcgagcataaactttcgcgaatcaagacgtaaaatttagaa
ttttcacatgaaaaaaatggcttagaggaacaaatacttcttggattgac
ttgaaacatttgttctttgacttattagtcaatttagcaggctaaaaagt
gccataaaagttacattttattcaaagtttgaagttttacagattttcta
ttttgtgaagaatttttcgcgagcataaactttcgcgaatggcccttcct
acaatttttaaagacatttactttcgcgaaaagggccaaaattcgcgaaa
atcgcgaaagtttctgctcgcgaatgTTTGTACGCCTNttaggttccccc
atcccacttttcaggtgttcatttaggttcccactttaggttcccaggtt
cccccatcccacttatccggtatgccatttttgtccaaaatcctttgGGG
ATAGGCGTTTTTAAAAGTTGGGGAATGCCAAGAAGGGGGTGATCAGACGC
CTTTCCGCACtataaaatcattaaaagttttttgctttgagaattaattt
ttcttcttctttcactTTGTTAgctgattaagaaaaaacaagaagaaagt
caaaaagaaaaggAGAAACTGGTTGGTATTTACTTTTAGTTACTTTATTC
ATACGATCGAATTTCTTTACCGTacctttttgattttggttcTTTTTACA
CCTGTGCTACTTATGCCGGTCTTACCGCCGGCACCCCTCCTACACAGACC
CTCAAATATTTGAATCCACTGCCAACATAATCTTTGatgataccttaagg
gaatgaATTAATGCGAGAATTAATTAATGCGGAATAGATTAATGCGGAAT
TAATTAATACGAATTTGGCcctttttcgcaaaattaaattccgcaaaact
taaaaaaattcgGCCATTAGCATTAATAAATTCcgcaaaacataattttt
tttgggattctcgcattaatttattctcgcattaatttattACCTTAAGG
TAACCTCTTATGTTATGAGTGAGGTTGAAAATGACTTTCTTGTTCTCGTT
TTCACCATTAAACTCGAGCTACTACTTTCgctaaaatacaaagttaaatt
gCTGTTAATTTAACTTGAAGCCTGAAGGATATCGCAAGAAACGACGAAAG
AAGAAATCTGTGATTGATGATCCAGACATGGCTGGCGAAACGAAAGAAGA
GGAAGAGTTACCCGATGTCAGCATCTTGTCCAAAGATCCTTATAATGAAA
ATAATGATGGAGCTAGCCGTACTGGAAAGGCCGAAACTAAAGCGCAAACG
AAAAAGGCGATTGATAAAAAGGTTGCTCGGAAAGCAAAGAAGTATTAATT
GCGGAAGAATAGATTCTTGAACGATTACAAGCTAATTCTGAGGAAAGATT
AATAAATGGAAAGAGAAATTTACATGCATTTTGTATGCATTTTTCTAAAT
GTTTAAATTCCGGTGTGATACTTCTACagctttaaaaaaagtgtaatttt
acattttggatttaatttttataaatttgtacCTTGGCTAAAGGGTTCCC
TGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005847XLOC_005847Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010401-exon-sc0000106-1491911889:153627..154188TCONS_00010401-exon-sc0000106-1491911889:153627..154188Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:153627..154188TCONS_00010401-exon-sc0000106-1510915933:153627..154188Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:153627..154188TCONS_00010401-exon-sc0000106-1575043694:153627..154188Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:154680..154787TCONS_00010401-exon-sc0000106-1491911889:154680..154787Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:154680..154787TCONS_00010401-exon-sc0000106-1510915933:154680..154787Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:154680..154787TCONS_00010401-exon-sc0000106-1575043694:154680..154787Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:154981..155078TCONS_00010401-exon-sc0000106-1491911889:154981..155078Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:154981..155078TCONS_00010401-exon-sc0000106-1510915933:154981..155078Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:154981..155078TCONS_00010401-exon-sc0000106-1575043694:154981..155078Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:156123..156216TCONS_00010401-exon-sc0000106-1491911889:156123..156216Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:156123..156216TCONS_00010401-exon-sc0000106-1510915933:156123..156216Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:156123..156216TCONS_00010401-exon-sc0000106-1575043694:156123..156216Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:156397..156878TCONS_00010401-exon-sc0000106-1491911889:156397..156878Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:156397..156878TCONS_00010401-exon-sc0000106-1510915933:156397..156878Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:156397..156878TCONS_00010401-exon-sc0000106-1575043694:156397..156878Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:157027..157110TCONS_00010401-exon-sc0000106-1491911889:157027..157110Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:157027..157110TCONS_00010401-exon-sc0000106-1510915933:157027..157110Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:157027..157110TCONS_00010401-exon-sc0000106-1575043694:157027..157110Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:160818..160927TCONS_00010401-exon-sc0000106-1491911889:160818..160927Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:160818..160927TCONS_00010401-exon-sc0000106-1510915933:160818..160927Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:160818..160927TCONS_00010401-exon-sc0000106-1575043694:160818..160927Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:161075..161114TCONS_00010401-exon-sc0000106-1491911889:161075..161114Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:161075..161114TCONS_00010401-exon-sc0000106-1510915933:161075..161114Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:161075..161114TCONS_00010401-exon-sc0000106-1575043694:161075..161114Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:161258..161317TCONS_00010401-exon-sc0000106-1491911889:161258..161317Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:161258..161317TCONS_00010401-exon-sc0000106-1510915933:161258..161317Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:161258..161317TCONS_00010401-exon-sc0000106-1575043694:161258..161317Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:161721..161801TCONS_00010401-exon-sc0000106-1491911889:161721..161801Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:161721..161801TCONS_00010401-exon-sc0000106-1510915933:161721..161801Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:161721..161801TCONS_00010401-exon-sc0000106-1575043694:161721..161801Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:161981..162135TCONS_00010401-exon-sc0000106-1491911889:161981..162135Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:161981..162135TCONS_00010401-exon-sc0000106-1510915933:161981..162135Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:161981..162135TCONS_00010401-exon-sc0000106-1575043694:161981..162135Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:162666..162714TCONS_00010401-exon-sc0000106-1491911889:162666..162714Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:162666..162714TCONS_00010401-exon-sc0000106-1510915933:162666..162714Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:162666..162714TCONS_00010401-exon-sc0000106-1575043694:162666..162714Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:163034..163188TCONS_00010401-exon-sc0000106-1491911889:163034..163188Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:163034..163188TCONS_00010401-exon-sc0000106-1510915933:163034..163188Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:163034..163188TCONS_00010401-exon-sc0000106-1575043694:163034..163188Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:164031..164154TCONS_00010401-exon-sc0000106-1491911889:164031..164154Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:164031..164154TCONS_00010401-exon-sc0000106-1510915933:164031..164154Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:164031..164154TCONS_00010401-exon-sc0000106-1575043694:164031..164154Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:168200..168247TCONS_00010401-exon-sc0000106-1491911889:168200..168247Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:168200..168247TCONS_00010401-exon-sc0000106-1510915933:168200..168247Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:168200..168247TCONS_00010401-exon-sc0000106-1575043694:168200..168247Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1491911889:168747..169181TCONS_00010401-exon-sc0000106-1491911889:168747..169181Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1510915933:168747..169181TCONS_00010401-exon-sc0000106-1510915933:168747..169181Clytia hemisphaericaexon
TCONS_00010401-exon-sc0000106-1575043694:168747..169181TCONS_00010401-exon-sc0000106-1575043694:168747..169181Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000106supercontigsc0000106:153627..169181 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.516666	0.335887	0.389999	0	0.397829	0	1.48545	0.573364	0.870769	0.526472	0.621508	0.775897	1.86222	2.41154	0.684553	0.104947	0.511667	0.524524	0.71606	0.999104	0.99907	0.730977	0.188109	0.718106	0.924536	0.495067	0	0.225294	0	0.38951
Blast
[Close]
BLAST of TCONS_00010401 vs. Swiss-Prot (Human)
Match: NUD22 (Nucleoside diphosphate-linked moiety X motif 22 OS=Homo sapiens GN=NUDT22 PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 3.283e-39
Identity = 91/282 (32.27%), Postives = 149/282 (52.84%), Query Frame = 2 
Query:  122 NLLLK---GTFIQSDFEVIFSSKCDRRPCATNDLEMEKRWQEICEENPRIYNGSKFRLHN-----VLQKDGKVVIEVGVTDYKSFLCTNPSESVKLLYDYGLKHHESKKACFADPIGVNCVVKTKDDRIVLMKRADWVGEAKGLFDTPGGHAEPEEMLQKLGLSIERVYEADGKHVIDEIFNSIVREIRDELNIPEEVIERPTLIGIIGNKELAEKPCFCFTVRCDLSAKDIEDYYIKGGAETDESTELIFIPKQELQSLKDSKWREVLTRMAPSGQAGIFL 943
             LLL+   G   Q   +   S   DRRP    D  +   W+   +  P +++  KFRLH+     +  +  ++++ +G+T Y+ FL TN S S   L   G       +A  ADP+GV   + T DD +V ++R+  V EA GL D PGGH EP+ +    G S +   +  G+ V+ E+F+S+++EI DE+N+P   + +P L+GI  N+  A +    F V+C L+++ +  +Y+ GG E  EST + F+  Q +Q L ++   E+   + PS +  I L
Sbjct:    6 TLLLQCPGGGLPQEQIQAELSPAHDRRPLPGGDEAITAIWETRLKAQPWLFDAPKFRLHSATLAPIGSRGPQLLLRLGLTSYRDFLGTNWSSSAAWLRQQGATDWGDTQAYLADPLGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPEPQALCP--GGSPQH-QDLAGQLVVHELFSSVLQEICDEVNLPLLTLSQPLLLGIARNETSAGRASAEFYVQCSLTSEQVRKHYLSGGPEAHESTGIFFVETQNVQRLLET---EMWAELCPSAKGAIIL 281
The following BLAST results are available for this feature:
BLAST of TCONS_00010401 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUD223.283e-3932.27Nucleoside diphosphate-linked moiety X motif 22 OS... [more]
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