TCONS_00010381 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010381
Unique NameTCONS_00010381
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1426

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010381 ID=TCONS_00010381|Name=TCONS_00010381|organism=Clytia hemisphaerica|type=transcript|length=1426bp
AAATTATCGAAATCGTGTGGAAAGTTCTAGATTTTTGCATCGGGTGGTCT
tcgtttttcattgttttacaCAGATAAGACCCTCTGTTTCTTCCTAAACT
CAAAGTCTTTTCGAACAGTTTTCAATTATTATTTAGGATGGCTCTTTGGG
GTAAAGGAGATCCTCGATGGATCGTTGAAGAAAGACCAGACTCAACAAAC
GTAAACAACTGGCATTGGACAGAAAGAGATGCTACAGCTTGGTCAAAGGA
TAAACTGAAGAAATTATTTATGTCAGTTAAAGAAGAAACAGGAGAAGGAA
GTTGGCAGATTGATGAAGTGAAAGATGTGACTGGTGAAGCAACCATCAAc
AACCGAAAAGGCAAactgatatttttttatgaatgggAGTTGAAGTTTGC
TTATAAAGGTCAATTAAATGGGAGTGAAGTCGATTATAAGGGTACTATAT
CCATCCCGAACCTTAGTGACGAAAATACTGCTGACGAAATCGATGTTGTT
GTTGCAGCCAAGGGAGATTCGAAGAATGCAGATAAACTGAAACACATGAT
ACGTGAAAATGGAATTAAAATGTGTCAGGATAAATGTGCCGAATATATAG
ATGCCCTGAGAGCAGAATACACAAAGGGAATGGTGCTACCAACCAAAGAT
GCTTCAAATATCAACGCAGCTCCAACTGGTACAAAAGAAGCAGCAAAACA
GTTTAAGGTTAGCgatcaaatgaaaaatttgaatgtcAATAAAGAAAAAA
AGACAGATGGAGTTACTATCACTGTATCAGAAGAATTCAAAACGAGGTCA
GAAGTGATTTACCACACTTTAACTCAATCAGAGCGTTTATGCATGTTCAC
ACGGTCCACATGCACTTCAGAACCAAAAGTTGGTGGAGAATTCAGCCTGA
TGAATGGAAACATCACTGGAAAATATATCCAACTTGATGTGGGCAAGAAA
ATAGTACAACAATGGAGGTTCAAAGAATGGTCCGAAGGCCTATTTTCGAC
GGTGACGATAGAATTAGAGGAGAAATCTGGAGATACTTTATTAAAACTTA
CACAAACTGGTGTTCCTGGATTCGATAAAACACGCACTGAACAAGGATGG
AAACAGTATTTCTTTGGACCCATCAAACAGATTTTTGGTTTTGGtgcttc
tttgttttgatgttgttttgatttttacccaaaaaatgattttattagCA
AAATGGCAGTTACATGATGGAAAGGAAATTTTCTTTACCCCAAAGAGAAA
ATGTGAATTTCATAATACCCATGATTTTTAAGAATTCTAGATTGATTTTT
TTACACAACAGATTATTATTTATATGCTGTcaagttttctttattttttg
ccACTTTGACATTATTGTAGAGTCATTAACGGTTAATAAAATACATTGAA
CTGTTCATGTCTACGAACCTTCTTGA
Run BLAST on NCBI

transcript from alignment at sc0000106:25884..36774+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010381 ID=TCONS_00010381|Name=TCONS_00010381|organism=Clytia hemisphaerica|type=transcript|length=10891bp|location=Sequence derived from alignment at sc0000106:25884..36774+ (Clytia hemisphaerica)
AAATTATCGAAATCGTGTGGAAAGTTCTAGATTTTTGCATCGGGTGGTCT
tcgtttttcattgttttacaCAGATAAGACCCTCTGTTTCTTCCTAAACT
CAAAGTCTTTTCGAACAGTTTTCAATTATTATTTAGGATGGCTCTTTGGG
GTAAAGGAGATCCTCGATGGATCGTTGAAGAAAGACCAGACTCAACAAAC
GTAAACAACTGGCATTGGTAAGGTTTttatggtttgtttttttcaaaagg
aaattcAACCAAAGATTTTTTCCATAGTCATTAgcagaacctccaaattt
tactggttaCTTGTTTTCCAAAGTCAAGATATTtaggtttgaatttttta
ttttctgcttgaaaacaatagaatttcagcgtttACTGtgaagggtaact
tgcatcagtcagTTAGgggtccatattcatttgacaacacaaaacgtcaa
attgacattatcctctgaaccccccacccccccacagataacgtcaagcg
atgtactgatgtataccaaaagttgtagccatttttcatcaaagttttcc
cgttCCGCTGCAAAGTCCGTACTTTCTTGCTACTTGGTTGTACCCTGTGT
GTGTATGTGTATgtgacctttatttaaaaagaaactaaaagCTCCACTTG
GCGCTAGGTCCGTGCCGTGCTTCAGGcgtaccaccttctttgccAACTTG
TGCGATGTGGTGACGCTCGATCatgcaaacaatgaaaatatgatgtaata
tCATAGCGCAAACCAATGGGATTACGCgagcagcaaattttcatgtactT
CATACACGAATATGTTTTTgtacagttagggaaaccatccaggatcctgc
cattcgataagccagcaaaaactaaatgacacttgtgaACTTAagttctt
accattttccatcgaaaacaaccaaaaacattgctacttNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCC
CCGGCCTTTTCTGAGGACACActaactttcactttcgattaaAATACATG
TGAGCGTGGTTGCAAAGCATGACCGATATCATAATATTAGTCGGGCTCAA
CTGTAAATAGAACCGCTATAACTTACATCTCGCTTACATGTTTACGCCTA
CGCGGCCAGAATAGTACCATAAGATATTGCAGTTTGACACCACTGAAACA
AAATTATCGAAATCGTGTGGAAAGTTCTAGATTTTTGCATCGGGTGGTCT
tcgtttttcattgttttacaCAGATAAGACCCTCTTTTTCTTCCTAAACT
CAAAGTCTTTTCGAACAGTTTTCAATTATTATTTAGGATGGCTCTTTGGG
GTAAAGGAGATCCTCGATGGATCGTTGAAGAAAGACCAGACTCAACAAAC
GTAAACAACTGGCATTGGTAAGGTTTttatggtttgtttttttcaaaagg
aaattcAACCAAAGATTTTTTCCATAGTCATTAgcagaacctccaaattt
tactggttaCTTGTTTTCCAAAGTCAAGATATTtaggtttgaatttttta
ttttctgcttgaaaacaatagaatttcagcgtttACTGtgaagggtaact
tgcatcggTCAGTTAGgggtccatattcatttgacaacacaaaacgtcaa
attgacattatcctctgaaccccccaccccccacagataacgtcaagcga
tgtactgatgtataccaaaagttgtagccgtttttcatcaaagttttccc
gttCCGCTGCAAAGTCCGTACTTTCTTGCTACTTGGTTGTACCCTGTGTG
TGTATGTGTATgtgacctttatttaaaaagaaattaaaagctccacttGG
CGCTAGGTCCGTGCCTTGCTTCAGGcgtaccaccttctttgccAACTTGT
GCGATGTGGAGACGCTCGATCatgcaaacaatgaaaatatgatgtaatat
CATAGCGCCGAACCAATGGGATTACGCgagcagcaaattttcatgtactT
CATACACGAATATGTTTTTGTAAGCTAATaaagtaccgtgagtggtcctt
aatccgacagccctgcctaattccgaccctcCAAATAAcagttataaaaa
aaatttatgtttacaaacactccctcttaaaaagtgtgagttgtaaaatt
aattaccttttattgtcATTTATATTATGACGTTGgacatattgcaataa
aaaatcatgtttcatataagaagcaattactgttaattatttggttcaac
tggttcactgtatcaaatttctcagtttagttgacactttggtatttttg
ttgcgtcacagtaaaaggttttttatttcagtttgtatctttgaaagacc
acgtcggatttaggcagggctgtcggatttaggaccactcacggtatagt
GTGGTTGGTGGTTACAAATATCCgctattttcacaaaaaggtaccatgag
attgggtaacttgcatcagtggaggctaacatgcatagccctcaaatgaa
agacctggttggtcattaaaatacaaaattaaatcaaaacaaaaatggta
gagtagagctgccagcggagctgcgtagttttattttaatgaccagccag
gtctttcatttgagggctatgcatgttagcctccactaatgcaagttgcc
caatctcacggtatacctttgatttcttaacgtcaaacctaacttttgaa
aactcCGCCaccccccaccccctcataacgtcaatttgacgttttgcgtt
gtcaaatgaatatggaccgCTCCCCTTagtcacaagtgtttcaaccggta
ttccaacgaagccatattttggtttgaacagaaatttcgcccgctctaat
caaaacaacaaaatggtcaatctcactaaagcaaaacattgtcGCCACAg
tatttccctggataaaaattctggtcacttgaccatccgtgattttagac
caatgaaaacgcttcatttccccggattaaagttgtgtctccACTAACAC
GCAGGAAttagctagaaaaagagagaaaaaaccggggNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNgaaatgtaatcttcactttagatgaatacttt
tatttatttggattcatgaaaggttcaaggtttgtttactttttatttca
aattatttcattgatttatcgtgctgcaatagctgattgaaaaacaaaga
tttttgatagttatcagcgtgggcttggccgccattttgaattttgattt
tttttctcctgtgctcagcaatttagaggttgCTCGAAATATGccatttg
gcttacgcgtaacacttgtgtagtcacactagcgtcccgccaaaatgcgt
atcaaagattaatgctgcgaaggtgctatattgtttacttgactctcaag
cagaAAATGTGCctcaaaacttctaaagggattcatgaaaaaataacccg
gcgctttttaatgaaattaacattttcaaaaactttgacgaAGAATTTCT
tgaattgcctaaaatttgagctagagatgaaaaaaatttgagtcaagcca
accttgaaaactaatttaaagatcaacttcccaagaaaaaaatCTACAGG
GAGGccgaacccacctagatcctaGAAAGTCCCTGTCATTCATTTGACAT
TTTCTGTGGCAATTCTGAGTTTGGAAGGCTCCCCTAAGTCAAAGTGGTTC
TTCTTGGTCCGAAGAGGAAAATTGGGAGGAAGAATCAGTACAAACTGGAT
ATTGGGCTTATCTCAAATGAAAGTTCAGTACCACCCTGCGGACGCATCGT
TTTGTCTGATGCCAAAAAGTATCCCACAGCCACATCATAAACCTTTTGCC
TGGTGTTAGTTCGGTGTTGATTTTTTAAACTTCTGGACACCGGACGCGTA
TGTTTCAAAAATGATGTGCGAACACATCGGACTCGAGTCCAGTGTTCAGA
TTGTCTGATGTTAAAAAGTATCCTCATCTGACACCAGACTTCGCGTGTCA
GGCGGCCGTGAGTGATGGTGAAGTTCCAGCATCATATCCGCTATGGAAGG
AATCTTTGAGCCaagttttactttttatctAGTTACCGTCaatggctcta
acttgggactatctcaccgaacctccaaagtcatttaattaactGTAACA
TAACCGCAAATCATAGATAGCAAATGATGTGAATACGCTACTCTCACCCG
GTAGGATAAGTGGGGGGGGTCGGAATAAGAAtttcctgggtggaaaattt
tagaaaaattaattagcagggTGATGACTATtgggtacccgagagtaaca
aAAAATGGCATCAAGATGTGAGCAGCTTGTGTGATGAaattgttaattac
ttcttcaaattatgtacttttaaaatgctttaaaaatgcatttggttgtg
attatgggatggtgaaagtttgattgataaacttggtttaagtatcaaaa
caaatttgttgctaaagtgatttaaacagtaagtgaaaatacaggccaga
tatcaacaatgccatgttttgaccaattgtcccaagttagagccgttgac
actatcctttaatttttctttgtatttgctTTGTTGCAGCTTGTTGCTAT
AAAATATCTGGCTTTCATATAAGTAAATTTAGCAGGCAAAATTGGGCAAA
TAAGCATTAGACCTTGCTCTTCTTGGCcagatcttttttaaacaaaGTTT
TACCTTTCCGAAATCATGATTTTCTCCTGTTTTCTCCAAATATGTCTGCC
AACGCGTTGATCTTGCACCTGTCATCGTTGAGCTTTTGTCTATTTGCACC
AACATTGGGTTTTCATACCCGCATTGATATATTattaaaatcaaaaggaa
agTTAGAATGATGCgattaattatttttaaagtaaatttgTGCCTGAAGG
tgaaagcaaataaaattaCATGATTTCAGTGGACTTTGTCAGtagaaatt
ggctgaaaaagATTTTCGTCCCAATAATTGCTTTTTCATCggtatttgat
aaaaaactcaaaagttttttgtcaaGGAACCTTAAATTATTTTATACCTA
GATAAAACAAATCCATTATATGATGTTATCATTAACAAAATTTCTGCtag
agtaattagttattcatgCGATTCCTTATTGTCTGTATGTTTGATTGAGC
TGACGACTTTATCGCTTATCCTAGAATTGGatttatctttaaaatattGT
TGTTGTCATTGATTCAGGACAGAAAGAGATGCTACAGCTTGGTCAAAGGA
TAAACTGAAGAAATTATTTATGTCAGTTAAAGAAGAAACAGGAGAAGGTA
CATTATCCTTTGTTTCATATCATATATCcatcttcaaaaattaaaatcac
atGTTAAACAGTCTTTAAGGCCCAAGCCAATCATCAGATGCTGTCAGATG
TGGATAAATTGTCCTCTCATTCatatattttaaagttttatccTGTAAAT
CTCGCTGATTATTAaaagacaaatttttttgaggttTATTTTTCAATTCA
CTTTAACATTGTTTCTGAGTTTAGGAAGTTGGCAGATTGATGAAGTGAAA
GATGTGACTGGTGAAGCAACCATCAAGTAAGTGAACTGCATAGACTGTCC
AGTGACATCAAGTTGCATCTCTGAAAATCAAAGCAGGATGATTGAGTTTT
ATTgcttgaaatatttaatatttgaatACCTCTTTTTTTACTCTTGATGG
CTTTCAatccttgaaaaaaaaattgatttttctttcagcAACCGAAAAGG
CAAactgatatttttttatgaatgggAGTTGAAGTTTGCTTATAAAGGTA
AAGgcatttttatttggatttattttatgatttttaaataaataaaactt
ataccattagaaaataaattttgtatcNAGTCCCTGTCATTCATTTGACA
TTTTCTGTGGCAATTCTGAGTTTGGAAGGCTCCCCTAAGTCAAAGTGGTT
CTTCTTGGTCCGAAGAGGAAAATTGGGAGGAAGAATCAGTACAAACTGGA
TATTGGGCTTATCTCAAATGAAAGTTCAGTACCACCCTGCGGACGCATCG
TTTTGTCTGATGCCAAAAAGTATCCCACAGCCACATCATAAACCTTTTGC
CTGGTGTTAGTTCGGtgttaattttttaaacttctGGACACCGGACGCGT
ATGTTTCAAAAATGATGTGCGAACACATCGGACTCAAGTCCAGTGTTCAG
ATTGTCTGATGTTAAAAAGTATCCTCATCTGACACCAGACTTCGCGTGTC
AGGCGGCCGTGAGTGATGGTGAAGTTCCAGCATCATATCCGCTATGGAAG
GAATCTTTGAGCCaagttttactttttatctAGTTACCGTCaatggctct
aacttgggactatctcaccgaacctccaaagtcatttaattaactGTAAC
ATAACCGCAAATCATAGATAGCAAATGATGTGAATAGCTTGTTGCTATAA
AATATCTGGCTTTCATATAAGTAAATTTAGCAGGCAAAATTGGGCAAATA
AGCATTAGACCTTGCTCTTCTTGGCcagatcttttttaaacaaaGTTTTA
CCTTTCCGAAATCATGATTTTCTCCTGTTTTCTCCAAATATGTCTGCCAA
CGCGTTGATCTTGCACCTGTCATCGTTGAGCTTTTGTCTATttgcaccaa
cattgagttttcatacccgcattgatatattattaaaatcaaaaggaaag
TTAGAATGATGCGATGAATtatttttaaagtaaatttgTGCCTGAAGGtg
aaagcaaataaaattaCATGATTTCAGTGGACTTTGTCAGtagaaattgg
ctgaaaaagATTTTCGTCCCAATAATTGCTTTTTCATCggtatttgataa
aaaactcaaaagttttttgtcaaGGAACCTTAAATTATTTTATACCTAGA
TAAAACAAATCCATTATATGATGTTATCATTAACAAAATTTCTGCtagag
taattagttattcatgCGATTCCTTATTGTCTGTATGTTTGATTGAGCTG
ACGACTTTATCGCTTATCCTAGAATTGGatttatctttaaaatattGTTG
TTGTCATTGATTCAGGACAGAAAGAGATGCTACAGCTTGGTCAAAGGATA
AACTGAAGAAATTATTTATGTCAGTTAAAGAAGAAACAGGAGAAGGTACA
TTATCCTTTGTTTCATATCATATATCcatcttcaaaaattaaaatcacat
GTTAAACAGTCTTTAAGGCCCAAGCCAATCATCAGATGCTGTCAGATGTG
GATAAATTGTCCTCTCATTCatatattttaaagttttatccTGTAAATCT
CGCTGATTATTAaaagacaaatttttttgaggttTATTTTTCAATTCACT
TTAACATTGTTTCTGAGTTTAGGAAGTTGGCAGATTGATGAAGTGAAAGA
TGTGACTGGTGAAGCAACCATCAAGTAAGTGAACTGCATAGACTGTCCAG
TGACATCAAGTTGCATCTCTGAAAATCAAAGCAGGATGATTGAGTTTTAT
TgcttgaaatatttaatatttgaatACCTCTTTTTTTACTCTTGATGGCT
TTCAatccttgaaaaaaaaattgatttttctttcagcAACCGAAAAGGCA
AactgatatttttttatgaatgggAGTTGAAGTTTGCTTATAAAGGTAAA
Ggcatttttatttggatttattttatgatttttaaataaataaaacttat
aCCATTAGAAGATAAATTTTGTATCTTTTGTCACAGCCTATGTGGTCACA
GCACTTCACACTAACATTGAAATTAACAGAAAGAGAAATGTGTTactaaa
agctttaaaaaacattttaggaCATCACTGACCAACCATGATTCCTTTAT
AGGTCAATTAAATGGGAGTGAAGTCGATTATAAGGGTACTATATCCATCC
CGAACCTTAGTGACGAAAATACTGCTGACGAAATCGATGTAAGCTCTCTA
GTTTCTAATTTGCTCTTAGAGTATACCCTGATTCATTATTattctctttt
tatttttccaggcCTGTCTAACATATTGTCTCTTGTTTTGTTAAGGTTGT
TGTTGCAGCCAAGGGAGATTCGAAGAATGCAGATAAACTGAAACACATGA
TACGTGAAAATGGAATTAAAATGTGTCAGGATAAATGTGCCGAATATATA
GATGCCCTGAGAGCAGGTGGGTTTCTAATTTAAAGCAGcacattgtttac
atttttaagTGAAATAGAGTAAAATATTCATAACAGAGAACCATGAAGAA
AGATGGACAGATCCCTCACTTGTCCTAGTTCTTTATTTGACTAAGATATT
TATGCACTTACTGGTTTCTATTCTTTCAGAATACACAAAGGGAATGGTGC
TACCAACCAAAGATGCTTCAAATATCAACGCAGCTCCAACTGGTACAAAA
GAAGCAGCAAAACAGTTTAAGGTaacatgaaaaaagaaaaaagtaagttC
AATATCAACCCCAATGCAATCTTACTCTTTTTTTCAGAGGGGTAGCTGAT
TGTCAATAAATTCAAACCTttctaaaatattgaattatttgaATCATCTT
ATCATTTTGTTTGTTGTTCTATTTCAGGTTAGCgatcaaatgaaaaattt
gaatgtcAATAAAGAAAGTAAGCTTTAtcttatgttaattattcttaAAA
GAATATTCTTTGTATTTGCATTGAAATCAAATTCAGTCTTCATAATAATc
attaaagttttttaaatctataaataacttttgaagtTGCTATCTAGTCA
TAtccaaaaaaagctaaatttgaGAGTGAGAGATCTCACCAGTTTTCACT
TTAATATTTTGGAATTCCAGAAAAGACAGATGGAGTTACTATCACTGTAT
CAGAAGAATTCAAAACGAGGTCAGAAGTGATTTACCACACTTTAACTCAA
TCAGAGGtaaaatctttagattttaaACTGGATCTTGCAAATTGATTGTT
TTTAACTTGGTGGCATTTTTTCTGAAGTGGACTGTAAAAGAATTCACATC
TCTTTCCTGTTTCGTTGTAGCGTTTATGCATGTTCACACGGTCCACATGC
ACTTCAGAACCAAAAGTTGGTGGAGAATTCAGCCTGATGAATGGAAACAT
CACTGGAAAATATATCCAACTTGTAAGTTATGTCAATTATTTCTTCTTTG
AATTATTCGTTAGAATAATTAGAATAATAAAGTTGTTTGAGACAAACGTC
AtctgatgttttttttcttgtttaagGATGTGGGCAAGAAAATAGTACAA
CAATGGAGGTTCAAAGAATGGTCCGAAGgtattcaatgttttttttctgt
acCACAATTTCAAAGGTTTTAAAAACACAGCAAATCTCAAAATTCTCTCA
CAATCACTAGATCGATaatgttcttctttttctttttcttcttgaaCGTG
GATCTACTGGATATAGTTAATGAAATTAATTATACATTTTCTTTCCCTTT
AGGCCTATTTTCGACGGTGACGATAGAATTAGAGGAGAAATCTGGAGATA
CTTTATTAAAACTTACACAAACTGGTGTTCCTGGATTCGATAAAACACGC
ACTGAACAAGGATGGAAACAGTATTTCTTTGGACCCATCAAACAGATTTT
TGGTTTTGGtgcttctttgttttgatgttgttttgatttttacccaaaaa
atgattttattagCAAAATGGCAGTTACATGATGGAAAGGAAATTTTCTT
TACCCCAAAGAGAAAATGTGAATTTCATAATACCCATGATTTTTAAGAAT
TCTAGATTGATTTTTTTACACAACAGATTATTATTTATATGCTGTcaagt
tttctttattttttgccACTTTGACATTATTGTAGAGTCATTAACGGTTA
ATAAAATACATTGAACTGTTCATGTCTACGAACCTTCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005838XLOC_005838Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010381-exon-sc0000106-1491911889:25884..26100TCONS_00010381-exon-sc0000106-1491911889:25884..26100Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:25884..26100TCONS_00010381-exon-sc0000106-1510915933:25884..26100Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:25884..26100TCONS_00010381-exon-sc0000106-1575043694:25884..26100Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:33949..34028TCONS_00010381-exon-sc0000106-1491911889:33949..34028Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:33949..34028TCONS_00010381-exon-sc0000106-1510915933:33949..34028Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:33949..34028TCONS_00010381-exon-sc0000106-1575043694:33949..34028Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:34256..34307TCONS_00010381-exon-sc0000106-1491911889:34256..34307Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:34256..34307TCONS_00010381-exon-sc0000106-1510915933:34256..34307Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:34256..34307TCONS_00010381-exon-sc0000106-1575043694:34256..34307Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:34470..34528TCONS_00010381-exon-sc0000106-1491911889:34470..34528Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:34470..34528TCONS_00010381-exon-sc0000106-1510915933:34470..34528Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:34470..34528TCONS_00010381-exon-sc0000106-1575043694:34470..34528Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:34736..34821TCONS_00010381-exon-sc0000106-1491911889:34736..34821Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:34736..34821TCONS_00010381-exon-sc0000106-1510915933:34736..34821Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:34736..34821TCONS_00010381-exon-sc0000106-1575043694:34736..34821Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:34929..35049TCONS_00010381-exon-sc0000106-1491911889:34929..35049Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:34929..35049TCONS_00010381-exon-sc0000106-1510915933:34929..35049Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:34929..35049TCONS_00010381-exon-sc0000106-1575043694:34929..35049Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:35213..35304TCONS_00010381-exon-sc0000106-1491911889:35213..35304Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:35213..35304TCONS_00010381-exon-sc0000106-1510915933:35213..35304Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:35213..35304TCONS_00010381-exon-sc0000106-1575043694:35213..35304Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:35461..35500TCONS_00010381-exon-sc0000106-1491911889:35461..35500Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:35461..35500TCONS_00010381-exon-sc0000106-1510915933:35461..35500Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:35461..35500TCONS_00010381-exon-sc0000106-1575043694:35461..35500Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:35704..35789TCONS_00010381-exon-sc0000106-1491911889:35704..35789Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:35704..35789TCONS_00010381-exon-sc0000106-1510915933:35704..35789Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:35704..35789TCONS_00010381-exon-sc0000106-1575043694:35704..35789Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:35904..36005TCONS_00010381-exon-sc0000106-1491911889:35904..36005Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:35904..36005TCONS_00010381-exon-sc0000106-1510915933:35904..36005Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:35904..36005TCONS_00010381-exon-sc0000106-1575043694:35904..36005Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:36110..36161TCONS_00010381-exon-sc0000106-1491911889:36110..36161Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:36110..36161TCONS_00010381-exon-sc0000106-1510915933:36110..36161Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:36110..36161TCONS_00010381-exon-sc0000106-1575043694:36110..36161Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1491911889:36336..36774TCONS_00010381-exon-sc0000106-1491911889:36336..36774Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1510915933:36336..36774TCONS_00010381-exon-sc0000106-1510915933:36336..36774Clytia hemisphaericaexon
TCONS_00010381-exon-sc0000106-1575043694:36336..36774TCONS_00010381-exon-sc0000106-1575043694:36336..36774Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000106supercontigsc0000106:25884..36774 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.2833	11.988	2.8459	3.70714	12.9588	11.2628	13.4088	12.641	10.5277	9.54024	16.9076	19.6523	21.7656	24.9209	20.7444	20.1548	18.4614	19.2328	13.0642	13.9053	20.0505	15.7348	21.4778	25.7511	42.3654	41.6139	22.8014	33.7912	12.985	12.4118
Blast
[Close]
BLAST of TCONS_00010381 vs. Swiss-Prot (Human)
Match: AHSA1 (Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Homo sapiens GN=AHSA1 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 4.118e-98
Identity = 153/346 (44.22%), Postives = 220/346 (63.58%), Query Frame = 3 
Query:  138 MALWGKGDPRWIVEERPDSTNVNNWHWTERDATAWSKDKLKKLFMSVKEETGEGSWQIDEVKDVTGEATINNRKGKLIFFYEWELKFAYKGQLNGSEVDYKGTISIPNLSDENTADEIDVVVAAKGDSKNADKLKHMIRENGIKMCQDKCAEYIDALRAEYTKGMVLPTKDASNINAAPTGT------KEAAKQFKVSDQMKNLNVNKEKKTDGVTITVSEEFKTRSEVIYHTLTQSERLCMFTRSTCTSEPKVGGEFSLMNGNITGKYIQLDVGKKIVQQWRFKEWSEGLFSTVTIELEEKSGDTLLKLTQTGVPGFDKTRTEQGWKQYFFGPIKQIFGFGASLF 1157
            MA WG+GDPRWIVEER D+TNVNNWHWTERDA+ WS DKLK LF++V+ +  EG  ++ EV  + GEA+INNRKGKLIFFYEW +K  + G  + S V YKG + IPNLSDEN+ DE+++ V+   D  + + L  +++E G+K+ ++    YI  L+ E+T+GM+LPT +  +++  P G       +  AK      Q + + V    K     IT+ E F T  E +Y   T  E +  FT +  T E   GG+F +++GN++G++  L   K IV +WRFK W EG F+T+T+   +K+G+T L +   G+P  ++ RT QGW++Y+F  IKQ FG+GA LF
Sbjct:    1 MAKWGEGDPRWIVEERADATNVNNWHWTERDASNWSTDKLKTLFLAVQVQNEEGKCEVTEVSKLDGEASINNRKGKLIFFYEWSVKLNWTGT-SKSGVQYKGHVEIPNLSDENSVDEVEISVSLAKDEPDTN-LVALMKEEGVKLLREAMGIYISTLKTEFTQGMILPTMNGESVD--PVGQPALKTEERKAKPAPSKTQARPVGV----KIPTCKITLKETFLTSPEELYRVFTTQELVQAFTHAPATLEADRGGKFHMVDGNVSGEFTDLVPEKHIVMKWRFKSWPEGHFATITLTFIDKNGETELCMEGRGIPAPEEERTRQGWQRYYFEGIKQTFGYGARLF 338
The following BLAST results are available for this feature:
BLAST of TCONS_00010381 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AHSA14.118e-9844.22Activator of 90 kDa heat shock protein ATPase homo... [more]
back to top