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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010377 ID=TCONS_00010377|Name=TCONS_00010377|organism=Clytia hemisphaerica|type=transcript|length=1704bp
CTCCCTCAAAACTGAAaatgcatttttattttttgttgatgtACCATTAG
CAGATAGTCCCCAGATAGTATACTCAAATCTTGTATTTGAACCTTTACAT
CTATTCAGcagtttattattattttcccTCGTCCTATTTTTCTTCTACCC
TCCTTTTCTCACCTTTCCCATCTCTAACCCCTTACTCTCGAGTGTCTAAT
TAACACAATTAACCTAATCTTGgtcatctgaaaatattttcaagaattgA
TAAAGGGGTTtgggtaaaatcgaaaaattaacaagcaggcTTGAACACCT
GAGAGTTAACCAGTCTACTTGAGAGTATCCTCAAATTCATTAAGCTTTTT
CGGTCTCTGATTTCTTCCAGTATGGAGTCGAATTGTCACAATCCAGAAGA
TGTTTTATCACATTAGCTTGAAATTTCTAACCCAAAAGTTAAAGTTGTTT
TTAATCTGAAAGTgtattgtttatatttttattgattattgatttttaaa
atgacACCACAAAGCTTTAACAAACATTTATACTTTTNgatagaggatgc
tctaacttaaactttgagctattactttttaaatttggttcagtggttct
tcatttatgagcttttaaagtcaaaattcaatcaTCGGGGAGtgcaaaaa
cacgtcaaaaatgaggtatcaaattataattgttttctttatctttaaca
TTGTGTTTTTCGAATGTGCTGATGTTTTACGACCTCGTTTAATTAGTTGA
TTGAtaatactgaggttaagcatacaaggataatcacgacgacggacgaa
aaatgtaataggctagtgaaaatacgaaaattgattggttgaaactcact
agcttgttaaattttcgttcgtcgtcgtgattttgctgatttacttaacc
tcactaataaagcaatttgatacctcttttttgacgtaatttcgctcttt
ccgaaaagtgaattttgactttaaaagctcataagtagggaACTTgtggg
tcaaatttaaaaagtaatagctaAAACTTTCAGTtagaatatctactttc
tacatattaaaatttcaagcactttgagacatttgttcggcctcgagACG
CTGAAAGAAAactgtccgaactttttcgtgggtcacccggtattatAACA
TATCACGAGGGAAGATTTTAATAAGTTATTTCATTGCACAGTGATAGTTT
GGAGGTTAAAATTCGATTTAAAACCTAAATCCAAGCAATTGGCACCTCTT
TGTGTATTTTTCAGACCagataatgaaatttttaccgaatatgtcatgtt
acataccgttggaaagcatttTCGATGCTGACTTAGAAAAATATGACAAC
TTATTACAAGTTGAAGGGGGTGAGGTTTCCTGAACTATGATGtaattgct
gatgtcagcaaaaattcCAAGACCGAccaaacaaatttgttttagtGAAT
TTGATTTAAATAAGAACCTTCATAAATAGATACGGGGGATTGGTGTTAGc
attgtttttattattctcatttttatagAGATTATATTTTGTTAACATTA
CACGATTACTAATTAGTAATTAAAGTATTTTtcatgttatgattctctaa
aAGTTTGAATTGGTCTGGATTCTGAAACGATTTCTAAGGGCTACAACTTC
TATAAATCAAAAACTTAGACTACGAGCTACAATACCCCCAAGTGTGGCGT
GATC Run BLAST on NCBI transcript from alignment at sc0000104:625924..627627 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010377 ID=TCONS_00010377|Name=TCONS_00010377|organism=Clytia hemisphaerica|type=transcript|length=1704bp|location=Sequence derived from alignment at sc0000104:625924..627627 (Clytia hemisphaerica)
GATCACGCCACACTTGGGGGTATTGTAGCTCGTAGTCTAAGTTTTTGATT
TATAGAAGTTGTAGCCCTTAGAAATCGTTTCAGAATCCAGACCAATTCAA
ACTtttagagaatcataacatgaAAAATACTTTAATTACTAATTAGTAAT
CGTGTAATGTTAACAAAATATAATCTctataaaaatgagaataataaaaa
caatgCTAACACCAATCCCCCGTATCTATTTATGAAGGTTCTTATTTAAA
TCAAATTCactaaaacaaatttgtttggTCGGTCTTGgaatttttgctga
catcagcaattaCATCATAGTTCAGGAAACCTCACCCCCTTCAACTTGTA
ATAAGTTGTCATATTTTTCTAAGTCAGCATCGAaaatgctttccaacggt
atgtaacatgacatattcggtaaaaatttcattatctGGTCTGAAAAATA
CACAAAGAGGTGCCAATTGCTTGGATTTAGGTTTTAAATCGAATTTTAAC
CTCCAAACTATCACTGTGCAATGAAATAACTTATTAAAATCTTCCCTCGT
GATATGTTataataccgggtgacccacgaaaaagttcggacagtTTTCTT
TCAGCGTctcgaggccgaacaaatgtctcaaagtgcttgaaattttaata
tgtagaaagtagatattctaACTGAAAGTTTtagctattactttttaaat
ttgacccacAAGTtccctacttatgagcttttaaagtcaaaattcacttt
tcggaaagagcgaaattacgtcaaaaaagaggtatcaaattgctttatta
gtgaggttaagtaaatcagcaaaatcacgacgacgaacgaaaatttaaca
agctagtgagtttcaaccaatcaattttcgtattttcactagcctattac
atttttcgtccgtcgtcgtgattatccttgtatgcttaacctcagtatta
TCAATCAACTAATTAAACGAGGTCGTAAAACATCAGCACATTCGAAAAAC
ACAAtgttaaagataaagaaaacaattataatttgatacctcatttttga
cgtgtttttgcaCTCCCCGAtgattgaattttgactttaaaagctcataa
atgaagaaccactgaaccaaatttaaaaagtaatagctcaaagtttaagt
tagagcatcctctatcNAAAAGTATAAATGTTTGTTAAAGCTTTGTGGTg
tcattttaaaaatcaataatcaataaaaatataaacaatacACTTTCAGA
TTAAAAACAACTTTAACTTTTGGGTTAGAAATTTCAAGCTAATGTGATAA
AACATCTTCTGGATTGTGACAATTCGACTCCATACTGGAAGAAATCAGAG
ACCGAAAAAGCTTAATGAATTTGAGGATACTCTCAAGTAGACTGGTTAAC
TCTCAGGTGTTCAAgcctgcttgttaatttttcgattttacccaAACCCC
TTTATcaattcttgaaaatattttcagatgacCAAGATTAGGTTAATTGT
GTTAATTAGACACTCGAGAGTAAGGGGTTAGAGATGGGAAAGGTGAGAAA
AGGAGGGTAGAAGAAAAATAGGACGAgggaaaataataataaactgCTGA
ATAGATGTAAAGGTTCAAATACAAGATTTGAGTATACTATCTGGGGACTA
TCTGCTAATGGTacatcaacaaaaaataaaaatgcattTTCAGTTTTGAG
GGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010377-exon-sc0000104-1491911889:625924..627627 | TCONS_00010377-exon-sc0000104-1491911889:625924..627627 | Clytia hemisphaerica | exon |
| TCONS_00010377-exon-sc0000104-1510915933:625924..627627 | TCONS_00010377-exon-sc0000104-1510915933:625924..627627 | Clytia hemisphaerica | exon |
| TCONS_00010377-exon-sc0000104-1575043694:625924..627627 | TCONS_00010377-exon-sc0000104-1575043694:625924..627627 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104 | supercontig | sc0000104:625924..627627 . |
Blast
The following BLAST results are available for this feature:
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