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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010343 ID=TCONS_00010343|Name=TCONS_00010343|organism=Clytia hemisphaerica|type=transcript|length=927bp
aGCTTTTTTGCTATCATGGATCTGATTTCCTCAATTTTTCGTCTACCCTA
TTACTCTGTGAACCTTCACCtctatttatatattttcagtAGGCTCTAGG
TAAATTTTATGTTACATTACCAGTTTGATAAGGTatgaaaaagtttcatt
tttatgtGTAGCTGAATGAAATTCCAAGgttgaattttctaaaaaaaatc
tattcatgatatgcaccaattGCAATGTCTTTCACGGACCCAAAAGCTta
ttggttgaaagtaacgtATCGACtggttttacgtcacttacaaccaatta
GCTGTTGGGTCCACGTGATGTAATATGAGAAGATGTAATGGTGCATTTCA
TAAATTCGAAATAATTATCACCATTTCAGTCTCAATGTTTTCTAGTACTC
ATGATAtccaccactgcaatgacttcacgaaattatgcaatttttctgtt
tttgttccacccaatacgtcactttttctattgtttaagtgacgtactgg
gtggaaaattttaaaagttctcagaggacactccagtggtgcatatcatg
aatagtcaGAAAACCTTAACCTTGGAATTTTCCTGTTTGTGTTGAAGCCA
AACTTTCcattaaatttttgttgaaaagtttCGGCAAATTTAATTGATTG
GGAATTAACTGCCCGCTTTTTAATATTCACtaatattttccaaagaaata
gcGCGTAGCTGCTTTTGATACAAGTTGAAAAACATTTGATGAAAACATTT
GTTGAaaacaatttaaattttgacaGGCTTCACATGTATAAACAGGGGAC
CAGTTATACCTATAATGAAACCTACTCAAGCCTTTATGTAGGTCTTAATA
CTATTTTAACTGTATTTTTACCAATGACGAGAACAAATTACTGAAACCTG
TTTATAACGTGAAGTCTTTCTTTTTTG Run BLAST on NCBI transcript from alignment at sc0000104:75316..76242 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010343 ID=TCONS_00010343|Name=TCONS_00010343|organism=Clytia hemisphaerica|type=transcript|length=927bp|location=Sequence derived from alignment at sc0000104:75316..76242 (Clytia hemisphaerica)
CAAAAAAGAAAGACTTCACGTTATAAACAGGTTTCAGTAATTTGTTCTCG
TCATTGGTAAAAATACAGTTAAAATAGTATTAAGACCTACATAAAGGCTT
GAGTAGGTTTCATTATAGGTATAACTGGTCCCCTGTTTATACATGTGAAG
CCtgtcaaaatttaaattgtttTCAACAAATGTTTTCATCAAATGTTTTT
CAACTTGTATCAAAAGCAGCTACGCgctatttctttggaaaatattaGTG
AATATTAAAAAGCGGGCAGTTAATTCCCAATCAATTAAATTTGCCGaaac
ttttcaacaaaaatttaatgGAAAGTTTGGCTTCAACACAAACAGGAAAA
TTCCAAGGTTAAGGTTTTCtgactattcatgatatgcaccactggagtgt
cctctgagaacttttaaaattttccacccagtacgtcacttaaacaatag
aaaaagtgacgtattgggtggaacaaaaacagaaaaattgcataatttcg
tgaagtcattgcagtggtggaTATCATGAGTACTAGAAAACATTGAGACT
GAAATGGTGATAATTATTTCGAATTTATGAAATGCACCATTACATCTTCT
CATATTACATCACGTGGACCCAACAGCtaattggttgtaagtgacgtaaa
accaGTCGATacgttactttcaaccaataAGCTTTTGGGTCCGTGAAAGA
CATTGCaattggtgcatatcatgaatagattttttttagaaaattcaacC
TTGGAATTTCATTCAGCTACacataaaaatgaaactttttcatACCTTAT
CAAACTGGTAATGTAACATAAAATTTACCTAGAGCCTactgaaaatatat
aaatagaGGTGAAGGTTCACAGAGTAATAGGGTAGACGAAAAATTGAGGA
AATCAGATCCATGATAGCAAAAAAGCt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010343-exon-sc0000104-1491911889:75316..76242 | TCONS_00010343-exon-sc0000104-1491911889:75316..76242 | Clytia hemisphaerica | exon |
| TCONS_00010343-exon-sc0000104-1510915933:75316..76242 | TCONS_00010343-exon-sc0000104-1510915933:75316..76242 | Clytia hemisphaerica | exon |
| TCONS_00010343-exon-sc0000104-1575043694:75316..76242 | TCONS_00010343-exon-sc0000104-1575043694:75316..76242 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104 | supercontig | sc0000104:75316..76242 . |
Blast
The following BLAST results are available for this feature:
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