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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010341 ID=TCONS_00010341|Name=TCONS_00010341|organism=Clytia hemisphaerica|type=transcript|length=823bp
GAATTATAAATAAACTAAAAGCAAATGGTTGAGACCTATCTATGTTAAAA
CCATTCACTTGAAGAATTTTTTATCAACTTCACAACAATGCCAGCTGTCC
AATGCCCAATTGATGGCTCCATACAGCACTCCAGACCTGGAAGCTGCAAT
CGTAGCTGCTCTGATTACTGCACATGCAACCACCCATTCAGCCTCCTCTA
CAGGAGCACTCAAGGTGGAACGAGTTAAACGACCAACGATTACCTCTGCG
GGCACAACATCCGATTGGCAATACTTCAAGACACGGTGGGACGAATATGT
CGCCGCTACTAAAGTCACTGGCAAGGACCGTGTTCTTCAGCTACTCGAGT
GCTGCGACGAGACACTCAGAAGAGACCTTACTCGATCAACAACAGGCCTC
TCAGACAAGACCGAGCAAGACGTATTGAAGGCTATCAAATCCTTCGCTGT
TCGAGACGAAAATGTTATGATTTCACGTGTAGCTCTGAATGATATTAGAC
AAGACAGGGAAGAGACAGTACGTTCTTTCTGTGCCCGACTACAGGACCAA
GCCAGTGTCTGTCAGTACAGCATCCAATGCCCTAACTGTCAACATGATGT
CGACTATACTGAAGCAATATTGAGAGATGCTCTCTGCAGAGGCGTAGAGG
ACACTGAAATTCAATTAAGCTTGTTGGGGCATACCAACCAAGACATGACA
CTAAATGAGGTTATCCATTTTGTGGAAGCCAAAGAAGCCGGTAAACGTTC
CGCAAACAAACTTTTGGAGAACCAAGCCACTGGTAATGCTATACGTAGTA
GCTACCAGAAAAGTCGTTCCACC Run BLAST on NCBI protein sequence of TCONS_00010341-protein >TCONS_00010341-protein ID=TCONS_00010341-protein|Name=TCONS_00010341-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
MAPYSTPDLEAAIVAALITAHATTHSASSTGALKVERVKRPTITSAGTTS
DWQYFKTRWDEYVAATKVTGKDRVLQLLECCDETLRRDLTRSTTGLSDKT
EQDVLKAIKSFAVRDENVMISRVALNDIRQDREETVRSFCARLQDQASVC
QYSIQCPNCQHDVDYTEAILRDALCRGVEDTEIQLSLLGHTNQDMTLNEV
IHFVEAKEAGKRSANKLLENQATGNAIRSSYQKSRST Run BLAST on NCBI transcript from alignment at sc0000104:16840..17662 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010341 ID=TCONS_00010341|Name=TCONS_00010341|organism=Clytia hemisphaerica|type=transcript|length=823bp|location=Sequence derived from alignment at sc0000104:16840..17662 (Clytia hemisphaerica)
GGTGGAACGACTTTTCTGGTAGCTACTACGTATAGCATTACCAGTGGCTT
GGTTCTCCAAAAGTTTGTTTGCGGAACGTTTACCGGCTTCTTTGGCTTCC
ACAAAATGGATAACCTCATTTAGTGTCATGTCTTGGTTGGTATGCCCCAA
CAAGCTTAATTGAATTTCAGTGTCCTCTACGCCTCTGCAGAGAGCATCTC
TCAATATTGCTTCAGTATAGTCGACATCATGTTGACAGTTAGGGCATTGG
ATGCTGTACTGACAGACACTGGCTTGGTCCTGTAGTCGGGCACAGAAAGA
ACGTACTGTCTCTTCCCTGTCTTGTCTAATATCATTCAGAGCTACACGTG
AAATCATAACATTTTCGTCTCGAACAGCGAAGGATTTGATAGCCTTCAAT
ACGTCTTGCTCGGTCTTGTCTGAGAGGCCTGTTGTTGATCGAGTAAGGTC
TCTTCTGAGTGTCTCGTCGCAGCACTCGAGTAGCTGAAGAACACGGTCCT
TGCCAGTGACTTTAGTAGCGGCGACATATTCGTCCCACCGTGTCTTGAAG
TATTGCCAATCGGATGTTGTGCCCGCAGAGGTAATCGTTGGTCGTTTAAC
TCGTTCCACCTTGAGTGCTCCTGTAGAGGAGGCTGAATGGGTGGTTGCAT
GTGCAGTAATCAGAGCAGCTACGATTGCAGCTTCCAGGTCTGGAGTGCTG
TATGGAGCCATCAATTGGGCATTGGACAGCTGGCATTGTTGTGAAGTTGA
TAAAAAATTCTTCAAGTGAATGGTTTTAACATAGATAGGTCTCAACCATT
TGCTTTTAGTTTATTTATAATTC Coding sequence (CDS) from alignment at sc0000104:16840..17662 >TCONS_00010341 ID=TCONS_00010341|Name=TCONS_00010341|organism=Clytia hemisphaerica|type=CDS|length=711bp|location=Sequence derived from alignment at sc0000104:16840..17662 (Clytia hemisphaerica)
GGTGGAACGACTTTTCTGGTAGCTACTACGTATAGCATTACCAGTGGCTT
GGTTCTCCAAAAGTTTGTTTGCGGAACGTTTACCGGCTTCTTTGGCTTCC
ACAAAATGGATAACCTCATTTAGTGTCATGTCTTGGTTGGTATGCCCCAA
CAAGCTTAATTGAATTTCAGTGTCCTCTACGCCTCTGCAGAGAGCATCTC
TCAATATTGCTTCAGTATAGTCGACATCATGTTGACAGTTAGGGCATTGG
ATGCTGTACTGACAGACACTGGCTTGGTCCTGTAGTCGGGCACAGAAAGA
ACGTACTGTCTCTTCCCTGTCTTGTCTAATATCATTCAGAGCTACACGTG
AAATCATAACATTTTCGTCTCGAACAGCGAAGGATTTGATAGCCTTCAAT
ACGTCTTGCTCGGTCTTGTCTGAGAGGCCTGTTGTTGATCGAGTAAGGTC
TCTTCTGAGTGTCTCGTCGCAGCACTCGAGTAGCTGAAGAACACGGTCCT
TGCCAGTGACTTTAGTAGCGGCGACATATTCGTCCCACCGTGTCTTGAAG
TATTGCCAATCGGATGTTGTGCCCGCAGAGGTAATCGTTGGTCGTTTAAC
TCGTTCCACCTTGAGTGCTCCTGTAGAGGAGGCTGAATGGGTGGTTGCAT
GTGCAGTAATCAGAGCAGCTACGATTGCAGCTTCCAGGTCTGGAGTGCTG
TATGGAGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010341-exon-sc0000104-1491911889:16840..17662 | TCONS_00010341-exon-sc0000104-1491911889:16840..17662 | Clytia hemisphaerica | exon |
| TCONS_00010341-exon-sc0000104-1510915933:16840..17662 | TCONS_00010341-exon-sc0000104-1510915933:16840..17662 | Clytia hemisphaerica | exon |
| TCONS_00010341-exon-sc0000104-1575043694:16840..17662 | TCONS_00010341-exon-sc0000104-1575043694:16840..17662 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104 | supercontig | sc0000104:16840..17662 . |
Blast
The following BLAST results are available for this feature:
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