TCONS_00010308 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010308
Unique NameTCONS_00010308
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3207

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010308 ID=TCONS_00010308|Name=TCONS_00010308|organism=Clytia hemisphaerica|type=transcript|length=3207bp
GATTTTCACGACTTAAGTCAGTTGACATCACGTTCAGGTCACATGTGTCA
AAATGTGATAGTTTGTTTTCTAAGCAAACTTATGGGAAACAATTTTGGCA
TTATACAGATATACGTCCTGTAAAATAAACTAACGATATCCTATAAGCTT
TATGTTACACTCCGAAAGTTTTCTTTTCATCAGTTTTTACAAGAGATGTC
GGTGCATATGGTTGCACCTTATGTTTTGGATTTGATGTTGGTCAATTTGG
TTTTGTCTTGATACCGATGTCGGTACTAATTAATAATTAGCTCTCTAATT
TGTTCTCCAGCGTAGCGTCTCAACTCATTAGTGTTTCGCGTAGTCCCTTG
AGACTTTTGATACTGTTTTTCTATTGTAGAATTTATTCTAGCCTTTTATA
TTATAATTAGGCAATTATGACGTAGCATTTTGAAGGCGTTTGACAGTGTT
GCCTTTCGTGTCTTTTTTGTGTTCAAACTCTCGTACTGTAGAGAGAGGAG
AGAAGAGAATTTTGACGTATTCTAAGAAGACATTTTCGTGCTCGAAACTA
AAAGCAATTTCTTGTTTGGAAAGAATTTTGTTACATTGAGGTGAAGTTTT
TACCACTGTCACGCGTGTTTTTACCTGCATATCGAATGAATATATGCTGA
GTCAAAACTTCAAACGTGAATCGTTTACAAGAGAGAATGATTGATATATT
TTGTCTATTTGTTATGTCActatgttatttttttgtttcaaatttttatt
ggttGTATATAGGTTGGatatgaaaatcttattttatgGCACTATGATAT
TTCTTTTAAGAGACAAAAAATGGCTACTTTAAAGGGATattcagatggtt
tgagatatttcgATTACAGAAACCTTCTGTGGTCCATAGTAAAACTTCAA
AAGTATTCTTGTGTaacaattttctaaaatcgagatatcaaaatttgaaa
tttttgaaaatgggctCTTAAATATCCCGAATTTGTAAAAtagttaggca
aaaatattttgaggttttgctcaggactatagaaggatcccacatgccaa
atattacaaaccatctgattattccTTTAAGGACACCAAAAGTTTGAAGA
ATATTTATTAGAGTCAATctgatttcttttattttctaatATCCTTATGT
TCGcttttgaaatttccaaggtCCTTGAAGAACTAGATTAGATTACGTTA
TCAAATTGACAATGGTTTATTTTAGAAAAGAACTTTTAACTTATGTCCCA
ATGTGTTAAGATTTGAACCGCGGTCGAATTTGAAATCTTTGTATATTAAA
ATCCGTCAAAAGTGGCGTGAGCCTTTATGAAGTACTGCGAAGAATGCTTT
GAATTTGAGAGGTAGGGTTAGCAGCTTGACAAGGGCGATTACGGTCTACG
TTaaagcgaccgtagtacagtggtagagcatccagctacggtgcgcaagg
ttgtgggttcaacccccagccgggtcataccataagattcccaaaatggt
aattgatgcttctctgcttgatgttcggcaactaaagagacggatcaagg
gtaagtggagaaattcagggaaaggagtggcgccctcccctaccttcggg
tagacagctatacgaaaagggagccttcgggtcgccctcgactgcggttg
aaaacttacttacttacggTCTAGCTGTGTAGTAAACATATTATTGCGTT
GACGAATTTTTTAGAATAGCATAATGAAAAAACAAAGTAAGTCTTTCATC
CTCCTGATCTGCACCTTCATCGAATTGACCAATGCTGGTAATTTTCTGAT
CTTGGGAGACTGGGGAGGAATCCCAATTCGGCCATACACAACAGATATCG
AGGAATCAACAGCCAATCAGATGTCAGTAACTGCAACTCAAAAGAATTCT
AAATTTGTTATCGCTTTAGGtgataatttttatttcacGGGTGTGAAGAA
CGAATATGACCATCGCTTCAATGAAACGTATAACGATGTATTCAACCAAC
CTTCTCTTCAAGTTCCATGGTACGTGGTTGCTGGCAACCATGATCACTAC
GGTAATATTACTGGACAACTGGAGTacacaaaacattcaaacatttGGAC
ATTCCCAAGTTTATGGTATTCAAAAACATTCCAATTTTCAGACACCAGCC
GCACAATGAAGCTGATAATGATTGATACAGTGGTGTTATGTGGGAACACT
GATTCTGACTTTGATGCTATGCCACCCAACGGTCCAGAGGGCTGGGTACT
AGCCGAAGAACAATGGGCGTGGTTGGAGACTGAACTTAAAGCATCTTCTG
ACTTCGATTACCTGCTTGTTGGTGGTCATTTTCCTGTCTGGTCGATCGCT
GAGCACGGTCCAACATCACAATTGGTTGAACGGTTGAAACCCTTATTAGA
GAAATATGCTGTGTCAGCATATATTAATGGACATGACCACAACTTGCAgC
ATATTAAAGAAGACTCATCAGATGTCCATTATTTTACCATCGGATGCGCC
AACTTCATTGAAGATTCCAAAAAACATAAGGATTCCATTCCCAAAGGTTC
ACTTCAATTTTACTGGGCAGAATCGAGTCGAAAAGGTGGATTTGCATTTG
TTGATGTGACCGATACTGAGATGTCACTGACCATGATTGATTCCATGGGC
GCACCTATTCATCAACAAAGTATCAAACCAAGAAATCATAgtttaaaacc
aatttttccttgatttttaCTATAAGATTTTTTGTGATAACGGTTTTATT
TTTAACATGCTTTTctcagaattttgaaataaattttcgtTTGTGATCCG
TTTTTTTCTCCCTTAGAGTACTTTATGATGTGAATATAAAACAGCCTTAT
CTAAATAATCTTATGGTTTCTCCTCAGTCTTTGATGAGTTTGTATATGCT
CggcaatctcgtacccagagacACCTGtacaacttttttttactttactg
ATGTGATACAATCGTGTGTGCTATCAGAATAATCAAAATAGGATGCGAAT
TTAAGTGCTCGGGCATTCGCTTTTGAGTAGTAAATACATGACAAGAACCA
TCGAAATTTGACCCTTTATCACAAAGAAGCTGGTGAACAAGTAGAATTTT
TATCGATAGTTTTatgtaaatttgaattatttcagCCCAAATTTTTAACG
acgttttaaacatttttttcacaaaatacaattttgcaTAAGTTTATAGC
CTTTGGT
Run BLAST on NCBI

protein sequence of TCONS_00010308-protein

>TCONS_00010308-protein ID=TCONS_00010308-protein|Name=TCONS_00010308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
MKKQSKSFILLICTFIELTNAGNFLILGDWGGIPIRPYTTDIEESTANQM
SVTATQKNSKFVIALGDNFYFTGVKNEYDHRFNETYNDVFNQPSLQVPWY
VVAGNHDHYGNITGQLEYTKHSNIWTFPSLWYSKTFQFSDTSRTMKLIMI
DTVVLCGNTDSDFDAMPPNGPEGWVLAEEQWAWLETELKASSDFDYLLVG
GHFPVWSIAEHGPTSQLVERLKPLLEKYAVSAYINGHDHNLQHIKEDSSD
VHYFTIGCANFIEDSKKHKDSIPKGSLQFYWAESSRKGGFAFVDVTDTEM
SLTMIDSMGAPIHQQSIKPRNHSLKPIFP
Run BLAST on NCBI

transcript from alignment at sc0000104:223702..230693-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010308 ID=TCONS_00010308|Name=TCONS_00010308|organism=Clytia hemisphaerica|type=transcript|length=6992bp|location=Sequence derived from alignment at sc0000104:223702..230693- (Clytia hemisphaerica)
GATTTTCACGACTTAAGTCAGTTGACATCACGTTCAGGTCACATGTGTCA
AAATGTGATAGTTTGTTTTCTAAGCAAACTTATGGGAAACAATTTTGGCA
TTATACAGATATACGTCCTGTAAAATAAACTAACGATATCCTATAAGCTT
TATGTTACACTCCGAAAGTTTTCTTTTCATCAGTTTTTACAAGAGATGTC
GGTGCATATGGTTGCACCTTATGTTTTGGATTTGATGTTGGTCAATTTGG
TTTTGTCTTGATACCGATGTCGGTACTAATTAATAATTAGCTCTCTAATT
TGTTCTCCAGCGTAGCGTCTCAACTCATTAGTGTTTCGCGTAGTCCCTTG
AGACTTTTGATACTGTTTTTCTATTGTAGAATTTATTCTAGCCTTTTATA
TTATAATTAGGCAATTATGACGTAGCATTTTGAAGGCGTTTGACAGTGTT
GCCTTTCGTGTCTTTTTTGTGTTCAAACTCTCGTACTGTAGAGAGAGGAG
AGAAGAGAATTTTGACGTATTCTAAGAAGACATTTTCGTGCTCGAAACTA
AAAGCAATTTCTTGTTTGGAAAGAATTTTGTTACATTGAGGTGAAGTTTT
TACCACTGTCACGCCAAAGTGTTNCATTTTCGTGCTCGAAACTAAAAGCA
ATTTCTTGTTTGGAAAGAATTTTGTTACATTGAGGTGAAGTTTTTACCAC
TGTCACGCGTGTTTTTAGTAAGTATATTTTTTCACCTAGACTTAGCTTTG
TTATTGGACTTTAGCCTAGATTTCTTGATGTCTTGTAAGCAAATTTTTAG
GCCTTGTCAAACATTTTTCTAAGCAAAACTTTTGTACTTATTTTTTAGCC
TGCATATCGAATGAATATATGCTGAGTCAAAACTTCAAACGTGAATCGTT
TACAAGAGAGAATGATTGATATATTTTGTCTATTTGTTATGTCACTATGT
TATTTTTTTGTTTCAAATTTTTATTGGTTGTATATAGGTTGGATATGAAA
ATCTTATTTTATGGCACTATGATATTTCTTTTAAGAGACAAAAAATGGCT
ACTTTAAAGGGATATTCAGATGGTTTGAGATATTTCGATTACAGAAACCT
TCTGTGGTCCATAGTAAAACTTCAAAAGTATTCTTGTGTAACAATTTTCT
AAAATCGAGATATCAAAATTTGAAATTTTTGAAAATGGGCTCTTAAATAT
CCCGAATTTGTAAAATAGTTAGGCAAAAATATTTTGAGGTTTTGCTCAGG
ACTATAGAAGGATCCCACATGCCAAATATTACAAACCATCTGATTATTCC
TTTAAGGACACCAAAAGTTTGAAGAATATTTATTAGAGTCAATCTGATTT
CTTTTATTTTCTAATATCCTTATGTTCGCTTTTGAAATTTCCAAGGTCCT
TGAAGAACTAGATTAGATTACGTTATCAAATTGACAATGGTTTATTTTAG
AAAAGAACTTTTAACTTATGTCCCAATGTGTTAAGATTTGAACCGCGGTC
GAATTTGAAATCTTTGTATATTAAAATCCGTCAAAAGTGGCGTGAGCCTT
TATGAAGTACTGCGAAGAATGCTTTGAATTTGAGAGGTAGGGTTAGCAGC
TTGACAAGGGCGATTACGGTCTACGTTAAAGCGACCGTAGTACAGTGGTA
GAGCATCCAGCTACGGTGCGCAAGGTTGTGGGTTCAACCCCCAGCCGGGT
CATACCATAAGATTCCCAAAATGGTAATTGATGCTTCTCTGCTTGATGTT
CGGCAACTAAAGAGACGGATCAAGGGTAAGTGGAGAAATTCAGGGAAAGG
AGTGGCGCCCTCCCCTACCTTCGGGTAGACAGCTATACGAAAAGGGAGCC
TTCGGGTCGCCCTCGACTGCGGTTGAAAACTTACTTACTTACGGTCTAGC
TGTGTAGTAAACATATTATTGCGTTGACGAATTTTTTAGAATAGCATAAT
GAAAAAACAAAGTAAGTCTTTCATCCTCCTGATCTGCACCTTCATCGAAT
TGACCAATGCTGGTAATTTTCTGATCTTGGGAGACTGGGGAGGAATCCCA
ATTCGGCCATACACAACAGATATCGAGGAATCAACAGCCAATCAGATGTC
AGTAACTGCAACTCAAAAGAATTCTAAATTTGTTATCGCTTTAGGTACGT
TGTTTTTTGTGTACACGCTTTTTTTATAAGAATGTAGACTAGCAAGCGTC
TGTCTTTCCTTGGACACAGGAACGCAGGAATAGTGCTTATAATAAAGAGT
TCTTATAAAAAATAGAAATTGCCGCGGGAGAGTGGGTTGGAAAGACAGAC
GCATGTATTCAGTGAACATATAAAAAAAAATAGATCCCATTGAAAGTTTA
ATCTGCAGCGAAATACAACGACGTGGTTTACTAGTCTAATAAGAATGATG
TTTTTTCATTTCATCATGGATATTCTTTTTGGGAAAAATCATCCGAAAAT
ATTCTTACTGTATTCTTAGGTTAGGATCGAAATTCAAACTTAGTTTAACA
AGAAATACCTATCTGAAGCATAAAATGACTTTTTGTGAAGGTATTTAAAC
CTGACTTTGGGATAATTGGTAATTTATAGTTAAAAATTTTTTCTTTAAAT
ACCATTCTTAGGGTTTGTTGCCAAACTCCATGATGATGATATTCTTAGCA
TATTCTTAATTATTCGGAAATTTTCATCATGAACATTCTTATAAAGTATA
TTCTTATAAAAAAAGCGCGTAATTTTCTTTTTCAACTCTCGTGTTAGATT
TTTGAATGTTGTAACTTTCTGAGGTTATATGAATGCTTCTTTAATTTTTC
TTATCCTTATTCTGGGTACCTAAAATCCGTATTGTTTTCTACATTTTGGA
GTCTAGAAGTTTTTCCTACCTGAAACTCAAGAGGGGTTCGTTATTTTTCT
ACTTCCAGGTGATAATTTTTATTTCACGGGTGTGAAGAACGAATATGACC
ATCGCTTCAATGAAACGTATAACGATGTATTCAACCAACCTTCTCTTCAA
GTTCCATGGTATGTAAAGAAATTTGTTAACTACACTCATTTTGTTTTATA
AGCATACGGTAAATTTCGGCTGAAGCTCACTATGCTTAAGTAAAGCTCAA
TTTTGAGCCTCGACTATGCTTAACCCTATGCTTGGTAAAAAAATTATGAA
GGGGGGGGGGTAAGTTTTTCGCGCATTTTCCCCTCTCTTTAATTTTGAGA
GAAATTAAGACATTCTATTGTTTTCGAATGTTTACCATATTATATATGAT
ATATGACTCTTTCTTCTGTTATTTTCTGAAGTTTTGGAAATTATGATTCT
AAAAGTTTCTTTGGCTGAGCCTCAAGGTATGCTTAGCATATGCTTAATTT
TTCTGGAAATTTGAGCTTCAGTATGCTTATAAAGAACCAAACCCCCTTTC
ATTTTGCTTAGAGTTGTGTCTACAATCAGTACTGTAATATTTTGGCAGTA
AGCCTCAAAAACAACCCCTAAGCTACGTTTTTTAGTTCTCTAAGCCCCTT
TCCCCCCAACTTCAATAATTGATAAGCACCAGAGAGCCCAATCCAACCAT
TGAAGTTGGGGGGAGGGGTTTGACTTTAAAAAACATGAAAATCACTATTC
ACTGCCATGTCAAATATTACGGGACTAATTGTAGATAGCCTTATATTTTT
TAATTAGCTATAGATTCAATCCCCGATCGCTGTTATAAAAGTTAACGAGA
AGCTTGGTAAACTAATCAAATCAAAAACTACACCCGGTAAAATTTTTTCA
TCCAAAGGGAGTGAAAATAACGAACTGAAACTCGATGAGGATTGATAATC
TGATATTTTTTATGGCTGCGGGGATTAAAATTCCATTGTTTTCAAGTCAG
AAAATACAGTAGGGATGCGAAAAATAACACAATATAGATTGGTATTATTT
ATTATTTTCAGTGGGATAAAAATTGGAGTATAATTTTCCACTGAGGACGA
TATATCGGCCAAATTTTTCCACTGGGAAGCGGTCCCAGTGGGTCTTTGTC
ACCTTAAAGAGCAGAAAGTGGCAATGAACCCTCCAGCATTTGACCTTCAT
GACTTGTGCAAATAGTACATAAGATTGGATCCCTCGCTTCCGGCTCTACA
CTGGACAGATCACTGCAATTAACGGTCGAATATATGGCGAAAAAGAAATT
TTCCTCCAAATTTCGAAAACCGAAAGTAGTTTTCAAGTGCCTTAAATTTA
GAATTAGAAAATATAATTTTAATTCTGAGCTTTAACATAAGACTTAACAC
TTGGGATCTGATGATACAAAAGCTTAGAAATGGTCCCACTAGGCTAACAA
TATTTAGTCAAATTGCATCTGGCATAGATTTGAGAAAATGTTGTTATTAT
TGATCTAGCCAGGGTTGTATGAAATGAACCCTCTCGGTACCATTCTCTTT
AGAAATAGGTTTCAAATACCAATTTAACAATCTTTTGCAGGTACGTGGTT
GCTGGCAACCATGATCACTACGGTAATATTACTGGACAACTGGAGTACAC
AAAACATTCAAACATTTGGACATTCCCAAGTTTATGGTATTCAAAAACAT
TCCAATTTTCAGGTATATCATTTTTCAATTCAAGACCAGGATGTGTACTG
GATGAGGCAGCATTTGAAAACACTTTCAAAATATAGAATTCTAAACTTTA
CCTAGACTAAATTAGGCAAATCACTATCTAAGAAATAAGCCAAAAGCCGA
AGAAAATTTGCAAACGGGTTTTTTTCCGAAAAGAGTTTACAGTCGGTAGA
GTTAGTCAGTCTCTCTTCAAAAGTCTCCCGCCGATTTTTTTATACCGCCA
TATTTTGCCGCCTTTACTATCACCGTAACGGACGATAACATCGTCTAAAC
TTTACAGTAAAATGAATTCTCAAGAACTTGAAATTTATGACTAGTCACCG
CGTTCCAGTTTCTAAGGAACCTCCAAAAATTAAAGGTTGAATCTTTTAAA
ACTCGACTTGGCCCTATATGGTAGTGTCATTACTCCCTCGTGTTGGCTAC
TCCAAACCTTAGTATTCTACTTTATCTTTTTAGACACCAGCCGCACAATG
AAGCTGATAATGATTGATACAGTGGTGTTATGTGGGAACACTGATTCTGA
CTTTGATGCTATGCCACCCAACGGTAGACAATTGGTTTCTTTTATTTCAT
TTTGATAAAGTTTCTTAAATAAGAAACGATTTCGTGTTCATTGTAACAAA
CTTGCCTCTTTGAAGAGATCTACAAACAAAATGACGATTACCGAAAGAAG
AGATCATTTTTAGAAGGTAGGAAGATTTGCAAAATAAAGCATCAAAAGAT
TTGACTTCAAAATAAAATTTCCCGTATGTTTTTCTTCCAAAACAGGTCCA
GAGGGCTGGGTACTAGCCGAAGAACAATGGGCGTGGTTGGAGACTGAACT
TAAAGCATCTTCTGACTTCGATTACCTGCTTGTTGGTGGTCATTTTCCTG
TCTGGTCGATCGCTGAGCACGGTCCAACATCACAATTGGTTGAACGGTTG
AAACCCTTATTAGAGAAATATGCTGTGTCAGCATATATTAATGGACATGA
CCACAACTTGCAGGTTAGTTTTTTTATAAGCAATTCTAATTTTGAGGATG
CTAAGGTATAAATAAGGGATTTAGAGTATGCTATTTTGCCTGCTAAATTG
AAATCGGGTATAGAAGCTCCTCTAAAATGACTTTTGATGCCGAAGATGTC
AATAGTAGTTAATTGGTTGCTTTCCTGTATAGAGATCAAGAGTTGCTAAG
CCAAATTAACTAAGTTATTTAATTTTTAGGGTCATAATGAGATCTGAGCC
TTTAGCAACCAGCTTACTTAAAAAATGTCCAATACTAGCTTACATATTGT
TTCAACTTTCATTTACAATCAAAGTCGCTATAACATTTGATTAAAAGGGG
ATTTTAGATTTAAATAATTAAGAAAAATCTTTTATAAGTGTTCCAATTTA
CTTCAGGAATGTAGAGTTTAACTCTAAGTTTTAGTATTAGATTTAAAACT
TAGGAAGACCTAAGGATCTCGTGATCCAAAAGCTCAAACGTGTTCTAATA
AGGCTTGGAAGCTACAAAACCCTTCAAGACCTTCAATGAAATAAAGTAGG
ACAAGCACTTGAACTGCAATTCTCACCCAAATACCCAAAATATATTCAAT
ATATTTTGAACAAATTCTTCGGATTCTACTTCAATTGCAGTGGAAGTAAG
AGTTTGTTTTACATGTCATTTTATTTCCTCATAGCATATTAAAGAAGACT
CATCAGATGTCCATTATTTTACCATCGGATGCGCCAACTTCATTGAAGAT
TCCAAAAAACATAAGGATTCCATTCCCAAAGGTTCACTTCAATTTTACTG
GGCAGAATCGAGTCGAAAAGGTGGATTTGCATTTGTTGATGTGACCGATA
CTGAGATGTCACTGACCATGATTGATTCCATGGGCGCACCTATTCATCAA
CAAAGTATCAAACCAAGAAATCATAGTTTAAAACCAATTTTTCCTTGATT
TTTACTATAAGATTTTTTGTGATAACGGTTTTATTTTTAACATGCTTTTC
TCAGAATTTTGAAATAAATTTTCGTTTGTGATCCGTTTTTTTCTCCCTTA
GAGTACTTTATGATGTGAATATAAAACAGCCTTATCTAAATAATCTTATG
GTTTCTCCTCAGTCTTTGATGAGTTTGTATATGCTCGGCAATCTCGTACC
CAGAGACACCTGTACAACTTTTTTTTACTTTACTGATGTGATACAATCGT
GTGTGCTATCAGAATAATCAAAATAGGATGCGAATTTAAGTGCTCGGGCA
TTCGCTTTTGAGTAGTAAATACATGACAAGAACCATCGAAATTTGACCCT
TTATCACAAAGAAGCTGGTGAACAAGTAGAATTTTTATCGATAGTTTTAT
GTAAATTTGAATTATTTCAGCCCAAATTTTTAACGACGTTTTAAACATTT
TTTTCACAAAATACAATTTTGCATAAGTTTATAGCCTTTGGT

Coding sequence (CDS) from alignment at sc0000104:223702..230693-

>TCONS_00010308 ID=TCONS_00010308|Name=TCONS_00010308|organism=Clytia hemisphaerica|type=CDS|length=5940bp|location=Sequence derived from alignment at sc0000104:223702..230693- (Clytia hemisphaerica)
CATATTAAAGAAGACTCATCAGATGTCCATTATTTTACCATCGGATGCGC
CAACTTCATTGAAGATTCCAAAAAACATAAGGATTCCATTCCCAAAGGTT
CACTTCAATTTTACTGGGCAGAATCGAGTCGAAAAGGTGGATTTGCATTT
GTTGATGTGACCGATACTGAGATGTCACTGACCATGATTGATTCCATGGG
CGCACCTATTCATCAACAAAGTATCAAACCAAGAAATCATAGTTTAAAAC
CAATTTTTCCTTGAGTCCAGAGGGCTGGGTACTAGCCGAAGAACAATGGG
CGTGGTTGGAGACTGAACTTAAAGCATCTTCTGACTTCGATTACCTGCTT
GTTGGTGGTCATTTTCCTGTCTGGTCGATCGCTGAGCACGGTCCAACATC
ACAATTGGTTGAACGGTTGAAACCCTTATTAGAGAAATATGCTGTGTCAG
CATATATTAATGGACATGACCACAACTTGCAGACACCAGCCGCACAATGA
AGCTGATAATGATTGATACAGTGGTGTTATGTGGGAACACTGATTCTGAC
TTTGATGCTATGCCACCCAACGGTACGTGGTTGCTGGCAACCATGATCAC
TACGGTAATATTACTGGACAACTGGAGTACACAAAACATTCAAACATTTG
GACATTCCCAAGTTTATGGTATTCAAAAACATTCCAATTTTCAGGTGATA
ATTTTTATTTCACGGGTGTGAAGAACGAATATGACCATCGCTTCAATGAA
ACGTATAACGATGTATTCAACCAACCTTCTCTTCAAGTTCCATGATGAAA
AAACAAAGTAAGTCTTTCATCCTCCTGATCTGCACCTTCATCGAATTGAC
CAATGCTGGTAATTTTCTGATCTTGGGAGACTGGGGAGGAATCCCAATTC
GGCCATACACAACAGATATCGAGGAATCAACAGCCAATCAGATGTCAGTA
ACTGCAACTCAAAAGAATTCTAAATTTGTTATCGCTTTAGCATATTAAAG
AAGACTCATCAGATGTCCATTATTTTACCATCGGATGCGCCAACTTCATT
GAAGATTCCAAAAAACATAAGGATTCCATTCCCAAAGGTTCACTTCAATT
TTACTGGGCAGAATCGAGTCGAAAAGGTGGATTTGCATTTGTTGATGTGA
CCGATACTGAGATGTCACTGACCATGATTGATTCCATGGGCGCACCTATT
CATCAACAAAGTATCAAACCAAGAAATCATAGTTTAAAACCAATTTTTCC
TTGAGTCCAGAGGGCTGGGTACTAGCCGAAGAACAATGGGCGTGGTTGGA
GACTGAACTTAAAGCATCTTCTGACTTCGATTACCTGCTTGTTGGTGGTC
ATTTTCCTGTCTGGTCGATCGCTGAGCACGGTCCAACATCACAATTGGTT
GAACGGTTGAAACCCTTATTAGAGAAATATGCTGTGTCAGCATATATTAA
TGGACATGACCACAACTTGCAGACACCAGCCGCACAATGAAGCTGATAAT
GATTGATACAGTGGTGTTATGTGGGAACACTGATTCTGACTTTGATGCTA
TGCCACCCAACGGTACGTGGTTGCTGGCAACCATGATCACTACGGTAATA
TTACTGGACAACTGGAGTACACAAAACATTCAAACATTTGGACATTCCCA
AGTTTATGGTATTCAAAAACATTCCAATTTTCAGGTGATAATTTTTATTT
CACGGGTGTGAAGAACGAATATGACCATCGCTTCAATGAAACGTATAACG
ATGTATTCAACCAACCTTCTCTTCAAGTTCCATGATGAAAAAACAAAGTA
AGTCTTTCATCCTCCTGATCTGCACCTTCATCGAATTGACCAATGCTGGT
AATTTTCTGATCTTGGGAGACTGGGGAGGAATCCCAATTCGGCCATACAC
AACAGATATCGAGGAATCAACAGCCAATCAGATGTCAGTAACTGCAACTC
AAAAGAATTCTAAATTTGTTATCGCTTTAGCATATTAAAGAAGACTCATC
AGATGTCCATTATTTTACCATCGGATGCGCCAACTTCATTGAAGATTCCA
AAAAACATAAGGATTCCATTCCCAAAGGTTCACTTCAATTTTACTGGGCA
GAATCGAGTCGAAAAGGTGGATTTGCATTTGTTGATGTGACCGATACTGA
GATGTCACTGACCATGATTGATTCCATGGGCGCACCTATTCATCAACAAA
GTATCAAACCAAGAAATCATAGTTTAAAACCAATTTTTCCTTGAGTCCAG
AGGGCTGGGTACTAGCCGAAGAACAATGGGCGTGGTTGGAGACTGAACTT
AAAGCATCTTCTGACTTCGATTACCTGCTTGTTGGTGGTCATTTTCCTGT
CTGGTCGATCGCTGAGCACGGTCCAACATCACAATTGGTTGAACGGTTGA
AACCCTTATTAGAGAAATATGCTGTGTCAGCATATATTAATGGACATGAC
CACAACTTGCAGACACCAGCCGCACAATGAAGCTGATAATGATTGATACA
GTGGTGTTATGTGGGAACACTGATTCTGACTTTGATGCTATGCCACCCAA
CGGTACGTGGTTGCTGGCAACCATGATCACTACGGTAATATTACTGGACA
ACTGGAGTACACAAAACATTCAAACATTTGGACATTCCCAAGTTTATGGT
ATTCAAAAACATTCCAATTTTCAGGTGATAATTTTTATTTCACGGGTGTG
AAGAACGAATATGACCATCGCTTCAATGAAACGTATAACGATGTATTCAA
CCAACCTTCTCTTCAAGTTCCATGATGAAAAAACAAAGTAAGTCTTTCAT
CCTCCTGATCTGCACCTTCATCGAATTGACCAATGCTGGTAATTTTCTGA
TCTTGGGAGACTGGGGAGGAATCCCAATTCGGCCATACACAACAGATATC
GAGGAATCAACAGCCAATCAGATGTCAGTAACTGCAACTCAAAAGAATTC
TAAATTTGTTATCGCTTTAGCATATTAAAGAAGACTCATCAGATGTCCAT
TATTTTACCATCGGATGCGCCAACTTCATTGAAGATTCCAAAAAACATAA
GGATTCCATTCCCAAAGGTTCACTTCAATTTTACTGGGCAGAATCGAGTC
GAAAAGGTGGATTTGCATTTGTTGATGTGACCGATACTGAGATGTCACTG
ACCATGATTGATTCCATGGGCGCACCTATTCATCAACAAAGTATCAAACC
AAGAAATCATAGTTTAAAACCAATTTTTCCTTGAGTCCAGAGGGCTGGGT
ACTAGCCGAAGAACAATGGGCGTGGTTGGAGACTGAACTTAAAGCATCTT
CTGACTTCGATTACCTGCTTGTTGGTGGTCATTTTCCTGTCTGGTCGATC
GCTGAGCACGGTCCAACATCACAATTGGTTGAACGGTTGAAACCCTTATT
AGAGAAATATGCTGTGTCAGCATATATTAATGGACATGACCACAACTTGC
AGACACCAGCCGCACAATGAAGCTGATAATGATTGATACAGTGGTGTTAT
GTGGGAACACTGATTCTGACTTTGATGCTATGCCACCCAACGGTACGTGG
TTGCTGGCAACCATGATCACTACGGTAATATTACTGGACAACTGGAGTAC
ACAAAACATTCAAACATTTGGACATTCCCAAGTTTATGGTATTCAAAAAC
ATTCCAATTTTCAGGTGATAATTTTTATTTCACGGGTGTGAAGAACGAAT
ATGACCATCGCTTCAATGAAACGTATAACGATGTATTCAACCAACCTTCT
CTTCAAGTTCCATGATGAAAAAACAAAGTAAGTCTTTCATCCTCCTGATC
TGCACCTTCATCGAATTGACCAATGCTGGTAATTTTCTGATCTTGGGAGA
CTGGGGAGGAATCCCAATTCGGCCATACACAACAGATATCGAGGAATCAA
CAGCCAATCAGATGTCAGTAACTGCAACTCAAAAGAATTCTAAATTTGTT
ATCGCTTTAGCATATTAAAGAAGACTCATCAGATGTCCATTATTTTACCA
TCGGATGCGCCAACTTCATTGAAGATTCCAAAAAACATAAGGATTCCATT
CCCAAAGGTTCACTTCAATTTTACTGGGCAGAATCGAGTCGAAAAGGTGG
ATTTGCATTTGTTGATGTGACCGATACTGAGATGTCACTGACCATGATTG
ATTCCATGGGCGCACCTATTCATCAACAAAGTATCAAACCAAGAAATCAT
AGTTTAAAACCAATTTTTCCTTGAGTCCAGAGGGCTGGGTACTAGCCGAA
GAACAATGGGCGTGGTTGGAGACTGAACTTAAAGCATCTTCTGACTTCGA
TTACCTGCTTGTTGGTGGTCATTTTCCTGTCTGGTCGATCGCTGAGCACG
GTCCAACATCACAATTGGTTGAACGGTTGAAACCCTTATTAGAGAAATAT
GCTGTGTCAGCATATATTAATGGACATGACCACAACTTGCAGACACCAGC
CGCACAATGAAGCTGATAATGATTGATACAGTGGTGTTATGTGGGAACAC
TGATTCTGACTTTGATGCTATGCCACCCAACGGTACGTGGTTGCTGGCAA
CCATGATCACTACGGTAATATTACTGGACAACTGGAGTACACAAAACATT
CAAACATTTGGACATTCCCAAGTTTATGGTATTCAAAAACATTCCAATTT
TCAGGTGATAATTTTTATTTCACGGGTGTGAAGAACGAATATGACCATCG
CTTCAATGAAACGTATAACGATGTATTCAACCAACCTTCTCTTCAAGTTC
CATGATGAAAAAACAAAGTAAGTCTTTCATCCTCCTGATCTGCACCTTCA
TCGAATTGACCAATGCTGGTAATTTTCTGATCTTGGGAGACTGGGGAGGA
ATCCCAATTCGGCCATACACAACAGATATCGAGGAATCAACAGCCAATCA
GATGTCAGTAACTGCAACTCAAAAGAATTCTAAATTTGTTATCGCTTTAG
CATATTAAAGAAGACTCATCAGATGTCCATTATTTTACCATCGGATGCGC
CAACTTCATTGAAGATTCCAAAAAACATAAGGATTCCATTCCCAAAGGTT
CACTTCAATTTTACTGGGCAGAATCGAGTCGAAAAGGTGGATTTGCATTT
GTTGATGTGACCGATACTGAGATGTCACTGACCATGATTGATTCCATGGG
CGCACCTATTCATCAACAAAGTATCAAACCAAGAAATCATAGTTTAAAAC
CAATTTTTCCTTGAGTCCAGAGGGCTGGGTACTAGCCGAAGAACAATGGG
CGTGGTTGGAGACTGAACTTAAAGCATCTTCTGACTTCGATTACCTGCTT
GTTGGTGGTCATTTTCCTGTCTGGTCGATCGCTGAGCACGGTCCAACATC
ACAATTGGTTGAACGGTTGAAACCCTTATTAGAGAAATATGCTGTGTCAG
CATATATTAATGGACATGACCACAACTTGCAGACACCAGCCGCACAATGA
AGCTGATAATGATTGATACAGTGGTGTTATGTGGGAACACTGATTCTGAC
TTTGATGCTATGCCACCCAACGGTACGTGGTTGCTGGCAACCATGATCAC
TACGGTAATATTACTGGACAACTGGAGTACACAAAACATTCAAACATTTG
GACATTCCCAAGTTTATGGTATTCAAAAACATTCCAATTTTCAGGTGATA
ATTTTTATTTCACGGGTGTGAAGAACGAATATGACCATCGCTTCAATGAA
ACGTATAACGATGTATTCAACCAACCTTCTCTTCAAGTTCCATGATGAAA
AAACAAAGTAAGTCTTTCATCCTCCTGATCTGCACCTTCATCGAATTGAC
CAATGCTGGTAATTTTCTGATCTTGGGAGACTGGGGAGGAATCCCAATTC
GGCCATACACAACAGATATCGAGGAATCAACAGCCAATCAGATGTCAGTA
ACTGCAACTCAAAAGAATTCTAAATTTGTTATCGCTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005787XLOC_005787Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010308-proteinTCONS_00010308-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010308-exon-sc0000104-1575043694:230104..230693TCONS_00010308-exon-sc0000104-1575043694:230104..230693Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1575043694:229977..230009TCONS_00010308-exon-sc0000104-1575043694:229977..230009Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1575043694:228550..229845TCONS_00010308-exon-sc0000104-1575043694:228550..229845Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1575043694:227686..227785TCONS_00010308-exon-sc0000104-1575043694:227686..227785Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1575043694:226132..226253TCONS_00010308-exon-sc0000104-1575043694:226132..226253Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1575043694:225571..225660TCONS_00010308-exon-sc0000104-1575043694:225571..225660Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1575043694:225131..225348TCONS_00010308-exon-sc0000104-1575043694:225131..225348Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1575043694:223702..224459TCONS_00010308-exon-sc0000104-1575043694:223702..224459Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1510915933:230104..230693TCONS_00010308-exon-sc0000104-1510915933:230104..230693Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1510915933:229977..230009TCONS_00010308-exon-sc0000104-1510915933:229977..230009Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1510915933:228550..229845TCONS_00010308-exon-sc0000104-1510915933:228550..229845Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1510915933:227686..227785TCONS_00010308-exon-sc0000104-1510915933:227686..227785Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1510915933:226132..226253TCONS_00010308-exon-sc0000104-1510915933:226132..226253Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1510915933:225571..225660TCONS_00010308-exon-sc0000104-1510915933:225571..225660Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1510915933:225131..225348TCONS_00010308-exon-sc0000104-1510915933:225131..225348Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1510915933:223702..224459TCONS_00010308-exon-sc0000104-1510915933:223702..224459Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1491911889:230104..230693TCONS_00010308-exon-sc0000104-1491911889:230104..230693Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1491911889:229977..230009TCONS_00010308-exon-sc0000104-1491911889:229977..230009Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1491911889:228550..229845TCONS_00010308-exon-sc0000104-1491911889:228550..229845Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1491911889:227686..227785TCONS_00010308-exon-sc0000104-1491911889:227686..227785Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1491911889:226132..226253TCONS_00010308-exon-sc0000104-1491911889:226132..226253Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1491911889:225571..225660TCONS_00010308-exon-sc0000104-1491911889:225571..225660Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1491911889:225131..225348TCONS_00010308-exon-sc0000104-1491911889:225131..225348Clytia hemisphaericaexon
TCONS_00010308-exon-sc0000104-1491911889:223702..224459TCONS_00010308-exon-sc0000104-1491911889:223702..224459Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:223702..230693 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.78257	2.71344	5.47833e-09	1.48687	41.8492	39.3747	80.264	87.6449	46.3559	62.4408	33.0594	37.2143	9.05322	6.72215	0.395009	1.27171	2.02528	1.55062	0.739483	0.773816	3.63439	3.4137	2.39283	4.28654	10.3149	14.1098	0.953863	1.26538e-09	5.79442	3.0906
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004843Calcineurin-like_PHP_ApaH
IPR029052Metallo-depent_PP-like
IPR024927Acid_Pase_5
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003993acid phosphatase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0016787 hydrolase activity
Blast
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BLAST of TCONS_00010308 vs. Swiss-Prot (Human)
Match: PPA5 (Tartrate-resistant acid phosphatase type 5 OS=Homo sapiens GN=ACP5 PE=1 SV=3)

HSP 1 Score: 288.115 bits (736), Expect = 9.003e-88
Identity = 137/303 (45.21%), Postives = 203/303 (67.00%), Query Frame = 2 
Query: 1778 TNAGNFLILGDWGGIPIRPYTTDIEESTANQMSVTATQKNSKFVIALGDNFYFTGVKNEYDHRFNETYNDVFNQPSLQ-VPWYVVAGNHDHYGNITGQLEYTKHSNIWTFPSLWYSKTFQFSDTSRTMKLIMIDTVVLCGNTDSDFDAMPPNGPEGWVLAEEQWAWLETELKASSDFDYLLVGGHFPVWSIAEHGPTSQLVERLKPLLEKYAVSAYINGHDHNLQHIKEDSSDVHYFTIGCANFIEDSKKHKDSIPKGSLQFYWAESSRKGGFAFVDVTDTEMSLTMIDSMGAPIHQQSIKPR 2683
            T A  F+ +GDWGG+P  P+ T  E + A +++ T     + F+++LGDNFYFTGV++  D RF ET+ DVF+  SL+ VPWYV+AGNHDH GN++ Q+ Y+K S  W FPS +Y   F+   T+ ++ + M+DTV LCGN+D DF +  P  P    LA  Q +WL+ +L A+ + DY+LV GH+PVWSIAEHGPT  LV++L+PLL  Y V+AY+ GHDHNLQ++ +D + V Y   G  NF++ SK+H+  +P G L+F++      GGFA+V+++  EM++T I++ G  + +  +  R
Sbjct:   23 TPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQILGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSD-DFLSQQPERPRDVKLARTQLSWLKKQLAAARE-DYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGHDHNLQYL-QDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSKEMTVTYIEASGKSLFKTRLPRR 322
The following BLAST results are available for this feature:
BLAST of TCONS_00010308 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPA59.003e-8845.21Tartrate-resistant acid phosphatase type 5 OS=Homo... [more]
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