TCONS_00010284 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010284
Unique NameTCONS_00010284
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1257

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010284 ID=TCONS_00010284|Name=TCONS_00010284|organism=Clytia hemisphaerica|type=transcript|length=1257bp
TGGAAAGTTTGTCGACCATTTGGTGCAGACTGGAGTTAACGGAGTGTTTG
TATCTGGAACAACAGGTGAATTCACCAGTCTATCCATGAGCGAAcgaaaa
atgattgctgaagcATGGCTCAAGTTTGGAAAAGATAAGTTGGACATGAT
CATTATACAGTGCGGTTCATCTTGCATGGATGAAACTAAAGAGATGGTTC
GTCATGCAAAGGAGAATGGAGCAGATGCAGTGGCTTGTATTTCACCAAGT
TTCCTCAAACCTATGAATGAAGAATATTTATCAGATTACTTGGAAGAGGT
GGCATCAGAAGCACCCAATACACCTTTCATGTACTATCACCTCCCATCCT
TCACTGGTGTCAAAGTGGACATGTCAAAACTGATGTCATTATGTTATGAG
AAGATTGAAACATTTGCAGGATTGAAATGCTCTTCAGAAAATATGTACGA
AATGATTGTTCCTCTTAAATTCAAACCCAAACCTCTCAAAGTATTCTATG
GATTTGATTGGCAATTTCTCGGTGGCCTTGCAATGGGTGCTGACTGTGCA
GTTTGCACGAGCTTTAACTTCATTGGTAATAAATTTGTAGAAATCACAAA
AGCTTATAAAAATGGAAACATGAAAGAAGCACAATCTATACAGcacAAAA
TTGCATTGGATTTTAATCCTTTCTGTTCTAAATATCATGGTGTGGCATTT
GCAAAAATCGCAACCACTTTGATTTCTGGTATTGATATGGGTCAACCAAG
ACGCCCTTTGCATCAGTTCAGTGAAAAGCAAATCAAAGAAATCAAAGCAT
TTCTAACGAAGGAAGGATACCTCAAAAAATGAGTGGACTTCCAcaggaaa
aatgaaattcatcGGCTTGGATTCATCATATGCGATAATTCAAGGACAAA
ATTTACAGTCGTCGTTTATTTACaatgaaaaactgttttttattactttt
ttagaATATAGTGATTTCTTAGATAATTTTGTAAGTATTTGATCTCTTAA
TAtttagaattgaaaaatcttatttGAAATCAGTGTAACCACAAACTCAA
TACATATTCTTTAGCTGAAATAGAGACATAGAGACATAGTAAAAGACACT
AGAATCGGGATTGGATGTGTGTTACTGGAAAAAGTCTGGGGCTACGAATT
TTGAACTTTCTAGTTTTGGATGTAAATGATCAATTCAAACACCTCCTTCT
CCcagacctggtaggatttttcaTCCAGTGGgtttaaaaataacggactg
aaactcg
Run BLAST on NCBI

transcript from alignment at sc0000104:580882..594673+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010284 ID=TCONS_00010284|Name=TCONS_00010284|organism=Clytia hemisphaerica|type=transcript|length=13792bp|location=Sequence derived from alignment at sc0000104:580882..594673+ (Clytia hemisphaerica)
TGGAAAGTTTGTCGACCATTTGGTGCAGACTGGAGTTAACGGAGTGTTTG
GTAAGAGCTTTGGTGTAAAAAACTATACAACCCATCGTTTAGTGGGCATa
caagcccgggggggggcttgcacttaggcaaaattaagtacggggacgtg
ctgctgatcagggtccctttttcagacTCTAGAGATATCTGATAGGGTCC
CAagtttactaattttcaagatgtggcCATTTCTGTGGTCAACCTTCCGA
CTTATCGAGCAATATTTCTAAAGTTTGATAAAGTTTAACCcttaaacggg
gggggggggttcactAAGGTTTAATCAAGGTTTTCCTTGTGTGagctaaa
aaaaatctaaaatagactgggttctaataagaTTAATAATGAAAAAGGAG
ATGTTTCTTACCCAGACggtgtgacattcataacgtccaaataacgttat
ttgaacgttaaaacaacgttgtgtgccagctgggtaggcTTCTGTGGCTC
TACTACATACTGAATCATCCGTCCTTTCCACTATTTGCATTTTAGTATCT
GGAACAACAGGTGAATTCACCAGTCTATCCATGAGCGAAcgaaaaatgat
tgctgaagcATGGCTCAAGTTTGGAAAAGATAAGTACGTTATTGCCCCCT
TCTCCTGTCTGACTTTTAAgcacacccctttctcacagacccactaggaa
CCCGTCTCattgaaaaattggccaaaatactgcccggtggaaaattatac
tcaaaTTTTtcccccactgaaaataatcaaataaaacaatccTCAATgca
aatattatgctatttttcccatctccactatattttctgacttaaaaaca
atggaattcaaatccccagccaaaaaaaatatggaagtctcaatccccat
cgagtttcagagTTTTCCCTCATCCCGAAACAATTTTAATCACAGACTCA
GAATCGTCAGTAATCTAAGCGTTAACATGGACGATACATAGATTTTTATC
CTTACTCTCAAAGGCTGACAAATTTCTTCCTTGTCAATAAGAAAgagatg
tttttgatgtttttaaattaTATGTGAGTACATGAGAGTCTGAGCAAAGT
GTATATTGTTTTacccacagatttataaagcccagaGGGCTAGATATCGT
GTTTTAAGCCATCGctggcaaaaaaagtgaatatcgcaagaaATATAGTT
TCTACTGTTTCTGAAAATCCTCGAAGCtcctgaaattctattgtaatttt
TAGGTTGGACATGATCATTATACAGTGCGGTTCATCTTGCATGGATGAAA
CTAAAGAGATGGTAGGTCTTTTATCAAAAGCTTGAGGGATGTGCGTTATC
CACCACTGAGCTTTATACTTTATACACCTTAGTACCGGCCAACCAATACT
TATCttttatttgagattttttgaaagtggtaacCTAATGGTAGCAATAA
TCAATTGTGGTGTGTATGCAGCAAGAGCGctatatatcttttttttggAT
ACTTGTGATGTAGCCCCGTTGGATGTTATGAAAAGTTTTGACACTGCAAC
TGTTTCTTTACGGGtaatcaaagatggcgggtaAAGTGAAGGATTTTTCT
TATTATCATCACCCAGGTTCGTCATGCAAAGGAGAATGGAGCAGATGCAG
TGGCTTGTATTTCACCAAGTTTCCTCAAACCTATGAATGAAGGTAAATGG
CGGCACTAGTTTATGCTTTATTATAGTCGACCACCCCCATCCTAGATAAA
CCCCCttcgaaaaagttgaataaaGAGTTCGATATTTTATGGCATAATGA
TTTTTTATgtgtaaaagagaaaaaaactaaatttgaaaTGGCTGACGATT
TGATAAAGTTGAAACTTCAAGTACTATCATATTTCAAACTGTTATTTTTT
CTCGTACACGTTATGCAGCTCTGATCATCGAGCATAATTTGATAAAGTCT
ATCTGTTACTATCGCAAAAATGGTTTAGACTTGCCAAATATNNNNNNNNN
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NNNNNNNNTTGGGACGATAAAACCATCATCAATtaaaagctgataaaatt
tagcgttcaaaattttttataaagttcCAAATTTTTTAGCTGCttggttt
ttttttattatctgaTTCCAGAACGGTGAATTATGAGGCGATTGGAAAGT
TTGTCGACCATTTGGTACAAACTGGAGTTAACGGAGTGTTTGGTAAGAGC
TTTGGTGTAAAAAACTATACAACCCATCGTTTAGTGGGCATacaagcccg
ggggggggcttgcacttaggcaaaattaagtacggggacgtgctgctgat
cagggtccctttttcagacTCTAGAGATATCTGATAGGGTCCCAagttta
ctaattttcaagatgtggcCATTTCTGTGGTCAACCTTCCGACTTATCGA
GCAATATTTCTAAAGTTTGATAAAGTTTAACCcttaaacggggggggggg
attcACTAAGGTTTAATCAAGGTTTTCCTTGTGTGagctaaaaaaaatct
aaaatagactgggttctaataagaTTAATAACGAAAAAGGAGATGTTTCT
TACCCAGACggtgtgacattcataacgtccaaataacgttatttgaacgt
taaaacaacgttgtgtgccagctgggtaggcTTCTGTGGCTCTACTACAT
ACTGAATCATCCGTCCTTTCCACTATTTGCATTTTAGTATCTGGAACAAC
AGGTGAATTCACCAGTCTATCCATGAGCGAAcgaaaaatgattgctgaag
cATGGCTCAAGTTTGGAAAAGATAAGTACGTTATTGCCCCGTTCTCCTGT
CTGACTTTTAAgcacacccctttctcacagacccactaggaaCCCATCTC
attgaaaaattggccaaaatactgcccggtggaaaattatactcaaaatt
ttccccactgaaaataatcaaataaaacaatccTCAATgcaaatattatg
ctatttttcccatccccactatattttctgacttaaaaacaatggaattc
aaatccccagccaaaaaaaatatggaagtctcaatccccatcgagtttca
gttcgttatAATTACCCCCACtagctgaaaaaatcccactgggtctgtga
gaaggctCGGTATCAGTTAGAAAGGTTTATTAAAAGAGTTTTCCCTCATC
CCGAAACAATTTTAATCACAGACTCAGAATCGTCAGTAATCTAAGCGTTA
ACATGGACGATACATAGATTTTTATCCTTACTCTCAAAGGCTGACAAATT
TCTTCCTTGTCAATAAGAAAGAGATGTTTCTGATGTTTTATGTGAGTACA
TGAGAGTCTGAGCAAAGTGTATATTGTTTTacccacagatttataaagcc
caggACTAGATATCGTGTTTTAAGGCATCGctggcaaaaaaagtgaatat
cgcaagaTATATAGTTTCTACTGTTTCTGAAAATCCTCGAAGCtcctgat
tggtcaagcgctgaaattctattgtaattttCAGGTTGGACATGATCATT
ATACAGTGCGGTTCATCTTGCATGGATGAAACTAAAGAGATGGTAGGTCT
TTTATCAAAAGCTTGAGGGATGTGCGTTATCCACCACTGAGCTTTATACT
TTATACACCTTAGTACCGGCTTTGGTACCGGCCAACCAATACTTATCttt
tatttgagattttttgaaagtggtaacCTAATGGTAGCAATAATCAATTG
TGGTGTGTATGCAGCAAGAGCGctatatatcttttttttggATACTTGTG
ATGTAGCCCCGTTGGATGTTATGAAAAGTTTTGACACTGCAACTGTTTCT
TTACGGGtaatcaaagatggcgggtaAAGTGAAGGATTTTTCTTATTATC
ATCACCCAGGTTCGTCATGCAAAGGAGAATGGAGCAGATGCAGTGGCTTG
TATTTCACCAAGTTTCCTCAAACCTATGAATGAAGGTAAATGGCGGCACT
AGTTTATGCTTTATTATAGTCGACCACCCCCATCCTAGATAAACCCCCtt
cgaaaaagttgaataaaGAGTTCGATATTTTATGGCATAATGATTTTTTA
TgtgtaaaagagaaaaaaactaaatttgaaaTGGCTGACGATTTGATAAA
GTTGAAACTTCAAGTACTATCATATTTCAAACTGTTATTTTTTCTCGTAC
ACGTTATGCAGCTCTGATCATCGAGCATAATTTGATAAAGTCTATCTGTT
ACTATCGCAAAAATGGTTTAGACTTGCCAAATATATAATGCTAGCTACAC
TTATCATCGATTTTGAGAGCTATCTTCATTAGCTGACACCAAACGTAAAC
AAAAAATGATGTAGAAGTTCTCCAACGTATTTAACTTATTTGTTTTGTCA
CATAGAATATTTATCAGATTACTTGGAAGAGGTGGCATCAGAAGCACCCA
ATACACCTTTCATGTACTATCACCTCCCATCCTTCACTGGTGTCAAAGGT
GAGTGGTTCCTCTATTGCCCCATGTATCTAGTCTACAGCCTAGACTGGAC
AATGTCAGTTGATAAGCCTTCAAAGGCGAAACAAAAAGTATATAtaccat
tgagtttgaagctcCGAAGAAGCTagaaaggaatcttcaacctttctcaa
ccagaaaaagtgaagccttcaAGATTTTCCCCGCATTTAGAAAACCACCA
TACAAAAACCGCGAATTTAGCCTAGGATAAGGAAAATGGcatcatttccc
atccaggagttacGTAACTAACCCCTTTGGGGCTGTGGAAACAATGATCT
TTATACCTGTCAAGTAACTTCGAAATAAATGAGTTTTTGTTCAATACTTG
TagcaaagtcgatatttttGCATGATATAATCTGCCTAGCTCCCAGTTCA
GCTTGTAGAAAGATAACATAGCACAAATTGAGGCCGGGATTGAGGCCAAT
GAATCAAGTTGTCTACCAACAgttattaaaaacaaaatttactgcAATAA
TCCAGAAAATAACTTGCTCAAATTGGAATAGGAAAGCTTATCTTGATact
ttaatacaataatgaccggttagtgagggctgtactgagaaatattgccc
gaggtcaagtaacgaccgagcttgcgaggttgttgcgttgaccgagggca
atattttcagtacagcccgaaaaaaaccggtcattattgtatttgttaac
agtttccttcagcttcgattgatttttagcacttttaccaggaaaaatag
cgaaataaagtgaaaaatacaagcgaaaagagatcaaaaatttttataat
ttctgacgtcagaaataaaaaatgagagaaatgatgtcaacgcattgttc
attttcctttgaaaaagtgacgtcacaatgaattttccNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNgacaatgtaggcccgtcgtcatgcgaaaagaaccaattgcat
tgcgcaaaaagtcatgtagcccgcttcgaaaaagtaaccggttaacaatt
cTCCTTATTACTCTCAGGCGAAGCCAaactatttgtttttttctaattgT
TAGACAATCGAGCATGACTTTTACTTAGCATTCAACGTGGaacctgtttt
tttttcagccatttttttcaaattgaaattgacaaaatcaaagaaaatgt
caaatagAATCCTTTCATCCCAAGGTCGTGAATAGACAGGGCGAAAATCG
GGCCGtttaaactagagctaagagatttatttttattttacctaaCTCGC
TTTAGTGGACATGTCAAAACTGATGTCATTATGTTATGAGAAGATTGAAA
CATTTGCAGGATTGAAATGCTCTTCAGAAAATATGTACGAAATGATTGTT
CCTCTTAAATTCAAACCCAAACCTCTCAAAGTATTCTATGGATTTGATTG
GGTAAGAAACTATTTCATGTGAACATttcaattgttaaaaaaatatttta
ttgtcgTCACTCGTTCAATCGTCAAAGTCAGATTCGATTTCTTCAGGGGA
TTAAGGtggggtcaaaatgcttgcaacgttacatAAATCATTTCTAGAAG
CTCATTTTGGACTCAaattgcgaattacgcaaaatttctaaatcaaaATA
CATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNctcacagcttgaaacgtcataacgacttataattagc
aattaagtggaagaatctgactctcacaggaaagttttaagtctcttttg
agaattggatgagtgattttcgataagaaatgcaataaaaatggttcgaa
aaatcatttaatgagggaaggagagtgaacaataatatcattactgcgga
catagctagaacataagaaatcggcaaaaatctggttacttgtatatcca
gtgtataataaatccttgatctaaccaaacgacgtttgatagcttgattt
tctttatgatgaaccatttagatgaacccatagtctgcagctgggttaga
aaattttctttttttcacccagccggtttccggaaacactacattttcaT
CTTACCCAAATATTTTCTCTTAATTCTTCATTTCAGCAATTTCTCGGTGG
CCTTGCAATGGGTGCTGACTGTGCAGTTTGCACGTAAGTTGTATATCTTC
AGCACTTATTAActcagctgacacacaacgttcttttaatgtttatctaa
cgttcacaacgtccacatGATGTTAGAtcaacgttgaaataacgttatgt
gccagctgggaagatTTTTACAATATGAGGGTTATGTATTGTCGAAAGTG
TGAATTTAAGTTGATGAGTACTTATGGCCTGTCCTAGATACCTGGGGAGA
GCACTAAATTCAAAAACGACCCGTACGTGCGGCCCGAATTTAAGTCTTTG
AAATCGAATTCTTACAGTGCCGAcaaaatttaacaaattttgggtaaatt
tgaGCGAAAAGTCGACCCCTTAcgatgcattttcttgaaagtttttgctc
agattttccaaattttacacccttagactacactttttctcatcttcact
CATTTCgatccttacagtgcactttggaaAGCTTGGAAAAGGACCCTTAA
AGGCGATCGGTAGATCGTTTACCTAATGCCCCCACCCCGGGCCAAGATAC
TCGAAGTTTTCAACTTTGTTAAAACATTGATTACGAGTTTGAAAATTAAC
AGCTCTATTTAAGTTGCAGAAGAATATGCCCTTACAGTGTAGctcttgag
cagtgaaaaggtatccttacagtgcattttaccgaacgtttctgaCGTTT
CTGAAGCAACCTGAAANagtgaaaaggtacccttacagtgcattttaccg
aacgtttctgaCGTTTCTGAAGCAACCGGAACATGAGCCTGAGATGTCAG
ACAACTTTCAAACAAATCAAGTTGTGTGCATGTCAAAACCATAAAGATat
atcagatttttactgtcagacgtgcaattcagcagtccccaaacacaccc
ttaaAGTGTATCAagctaaaagaaaacttttgtagTGCATTCTATCAAAA
GAACACCATTAGAGTGCATTTCGAGGATCTCGATAAGGGCGTGCACATGC
CGtaggtcggaccatatgagtccCCCGGGCATGTAGAGTACAATGCTTGA
TTTGATCTTTCCTTCCTTAGGAGCTTTAACTTCATTGGTAATAAATTTGT
AGAAATCACAAAAGCTTATAAAAATGGAAACATGAAAGAAGCACAATCTA
TACAGGTAATCTTTTCCTAACCCGAATTTCCATCCCAATTAGTTGGAAAA
TACACCCAGTCCCAGTAATAGGGAAATAGTTTAGGAGGtggggaaaattt
gaaaatagtgGTTGGCCCAGGGCGGAGTAAGTAGTtgcggaggtgtttac
agtgtcCCAAACTCTACCACCACTTTTTTTTATCCGTAAACGGTCTGACC
ACAgtgttatttttttacttttaaacgaaagcgaaagcgactgaGTTCTG
ATGTTTACGTATATGATTTACGTTTTAATTTGGTGAGATTGTTATGCAAA
TCACCGCACTCAATACAATATTCATCCAAAATCTGAATAAAAAACGATCA
GATTGGCGTAGCAACCCAATAGCGTAGACAAGAagacgcaaaatttgtgt
aggatagcagatttttatgacacagcaatcatctttttatattataaata
gataattacagtgtcataaaattCTGCTTTCTTACACAAATTTTGAgacc
ctcctgtctacgctactgccaACCCGGGTAGATTCTTTTACGGAGGCATT
ATCTTTGGAGTGAATACGTGCCGTAAGCAGGGTATCAGAATCTGCTCTAT
TGCAAACAGTAGACTTCAAAATCCCCCTGAAAGCAAGCCAATCGCTTGTT
TCTTTTCCTGCAGGTAAAACTCTACAACAGGTCTCAAAGACAATTGTTGG
CCTTATCCCAGTTGATACAATCAAGAGTAGAAATACTTTAAAGGACTTAT
GTTCACCAAATtcaatttaaaattcaaaatgttttatttttcagcacAAA
ATTGCATTGGATTTTAATCCTTTCTGTTCTAAATATCATGGTAagatttg
tcgttctttatgaaatttgtcgttctttttgtctttttttaagtAAGGCG
AGAATAAATTATAACTCccttagtaaataatgactctCCAAAACCCTTTT
TCTAAAGAGGTAGGGAGTTAAAAAACTAGTTGGATAAGACTCCCCTCCTC
AAATGTCAAgcaaaagaagtcattgtattgcATTGCATTAACCCTAACTA
ACCCTAACACACTGCATTCGCAAATCTGGGAAACAGAGTCTTTAGAATTA
AAGgtttaatttggaaattttgtagATATCCTAATTATTTGTTACTTTTG
TACCTTTCTTTGTTGTTAATTTCCAACAATATTACAAAAGCTTGACTATA
TTAACCTGATCAATATATTGTGCCCCTTTTTTCGATTCACTACCCTTTGT
TGCCGAAGTCATCACAAATTTACATTGTAAGATTCCGAACTTCAGACTTA
TACTGAAAATGGATCACTTCACCTTTCCCAACGTATGGTTTGTTATTGTA
CATGGCGTTGTAAATTCACCATTTtattgtttatgatttttcatCGAATT
TGCCCTTCAAACGAATGATTGAGAAATGTTTTCGAATACAACGAACTGAT
ATTGAATTAATACAAAAGCTTCTTTTGTGGCTTGTCCTAAAAAAACTGGT
AATagagaatgaaaaaaaacaaaaaaacagaaaacaattCTACTCTgtca
atttttaaatcaagcacATCTAGATGCTTACCCAAGGAACACGAGGAACC
AACTTCATCCATCCAACATCTTTGAAAGTCTTCAGGCTGCCTTAGATTTT
TCTGNccccccccccccgggctgcaTTCGCAAATCTGGGAAACAGAGTCT
TTAGAATTAAAGGTTTAATTTTGTAGATATCCTAATTATTTGTTACTTTT
GTACCTTTCTTTGTTGttaatttcaaacaatttttcaaaagcttaacTAC
ATAGATAGGGGGAGTCATTATAAACCAGGGGGAGTCTAAATTTGTTAGGA
AATATTAGCTCTAGGGAGTCATAATTTActagtttataagaactggGGAG
TCATAATAAACTAGTGAATTTTTAACTGGGGAGTCACAATAATCTAGTTT
ATTATGACTGGGGGGTTATAATTTAGGGGAGTTGAAATTAACTGTGACAC
CGGAATGCAGGTGAATGAAAAAAACTCTCATGCGGccggttggaaaattt
tttgttgatatttttgataacttaatcattgaaatagaactatAAAGATA
ACTGTTATGTACAAagaaacagtatgaagtaagccctgaatactaatgca
TCAATAttactaacgaacaaaacttgatttacaagcaggaatatctaacc
aaacgacgttgGATAGCTTCAACGGTCaacttcattttctttatgatgaa
acatatagatgaacccatagtctgcgacCGGGTCaggaaatctttttatt
tttgcctaatGCAGGATTTGTTACACAGACCCCCTCCaagaaaaagtgac
gaaaattatttgtttttgttctAGGTGTGGCATTTGCAAAAATCGCAACC
ACTTTGATTTCTGGTATTGATATGGGTCAACCAAGACGCCCTTTGCATCA
GTTCAGTGAAAAGCAAATCAAAGAAATCAAAGCATTTCTAACGAAGGAAG
GATACCTCAAAAAATGAGTGGACTTCCAcaggaaaaatgaaattcatcGG
CTTGGATTCATCATATGCGATAATTCAAGGACAAAATTTACAGTCGTCGT
TTATTTACaatgaaaaactgttttttattacttttttagaATATAGTGAT
TTCTTAGATAATTTTGTAAGTATTTGATCTCTTAATAtttagaattgaaa
aatcttatttGAAATCAGTGTAACCACAAACTCAATACATATTCTTTAGC
TGAAATAGAGACATAGAGACATAGTAAAAGACACTAGAATCGGGATTGGA
TGTGTGTTACTGGAAAAAGTCTGGGGCTACGAATTTTGAACTTTCTAGTT
TTGGATGTAAATGATCAATTCAAACACCTCCTTCTCCcagacctggtagg
atttttcaTCCAGTGGgtttaaaaataacggactgaaactcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005777XLOC_005777Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010284-exon-sc0000104-1491911889:580882..580931TCONS_00010284-exon-sc0000104-1491911889:580882..580931Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1510915933:580882..580931TCONS_00010284-exon-sc0000104-1510915933:580882..580931Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1575043694:580882..580931TCONS_00010284-exon-sc0000104-1575043694:580882..580931Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1491911889:581427..581514TCONS_00010284-exon-sc0000104-1491911889:581427..581514Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1510915933:581427..581514TCONS_00010284-exon-sc0000104-1510915933:581427..581514Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1575043694:581427..581514TCONS_00010284-exon-sc0000104-1575043694:581427..581514Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1491911889:586766..586823TCONS_00010284-exon-sc0000104-1491911889:586766..586823Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1510915933:586766..586823TCONS_00010284-exon-sc0000104-1510915933:586766..586823Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1575043694:586766..586823TCONS_00010284-exon-sc0000104-1575043694:586766..586823Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1491911889:587141..587216TCONS_00010284-exon-sc0000104-1491911889:587141..587216Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1510915933:587141..587216TCONS_00010284-exon-sc0000104-1510915933:587141..587216Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1575043694:587141..587216TCONS_00010284-exon-sc0000104-1575043694:587141..587216Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1491911889:587637..587729TCONS_00010284-exon-sc0000104-1491911889:587637..587729Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1510915933:587637..587729TCONS_00010284-exon-sc0000104-1510915933:587637..587729Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1575043694:587637..587729TCONS_00010284-exon-sc0000104-1575043694:587637..587729Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1491911889:589137..589282TCONS_00010284-exon-sc0000104-1491911889:589137..589282Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1510915933:589137..589282TCONS_00010284-exon-sc0000104-1510915933:589137..589282Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1575043694:589137..589282TCONS_00010284-exon-sc0000104-1575043694:589137..589282Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1491911889:590568..590614TCONS_00010284-exon-sc0000104-1491911889:590568..590614Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1510915933:590568..590614TCONS_00010284-exon-sc0000104-1510915933:590568..590614Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1575043694:590568..590614TCONS_00010284-exon-sc0000104-1575043694:590568..590614Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1491911889:591652..591736TCONS_00010284-exon-sc0000104-1491911889:591652..591736Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1510915933:591652..591736TCONS_00010284-exon-sc0000104-1510915933:591652..591736Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1575043694:591652..591736TCONS_00010284-exon-sc0000104-1575043694:591652..591736Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1491911889:592526..592571TCONS_00010284-exon-sc0000104-1491911889:592526..592571Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1510915933:592526..592571TCONS_00010284-exon-sc0000104-1510915933:592526..592571Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1575043694:592526..592571TCONS_00010284-exon-sc0000104-1575043694:592526..592571Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1491911889:594106..594673TCONS_00010284-exon-sc0000104-1491911889:594106..594673Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1510915933:594106..594673TCONS_00010284-exon-sc0000104-1510915933:594106..594673Clytia hemisphaericaexon
TCONS_00010284-exon-sc0000104-1575043694:594106..594673TCONS_00010284-exon-sc0000104-1575043694:594106..594673Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:580882..594673 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.575498	0.660236	0.060693	1.16249	2.46746	1.09254	35.1173	39.3167	0	0	0	0	0	0	1.99772e-09	4.52348e-09	7.72917e-09	1.88765e-09	0.000465813	1.08656e-05	1.95461e-07	0	3.98655e-06	0.0121292	4.60785	0.965261	1.05953e-09	7.29579e-08	0	1.53527
Blast
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BLAST of TCONS_00010284 vs. Swiss-Prot (Human)
Match: NPL (N-acetylneuraminate lyase OS=Homo sapiens GN=NPL PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.523e-60
Identity = 106/261 (40.61%), Postives = 160/261 (61.30%), Query Frame = 2 
Query:    2 GKFVDHLV-QTGVNGVFVSGTTGEFTSLSMSERKMIAEAWLKFGKDKLDMIIIQCGSSCMDETKEMVRHAKENGADAVACISPSFLKPMNEEYLSDYLEEVASEAPNTPFMYYHLPSFTGVKVDMSKLMSLCYEKIETFAGLKCSSENMYEMIX-XXXXXXXXXXXXYGFDWQFLGGLAMGADCAVCTSFNFIGNKFVEITKAYKNGNMKEAQSIQHKIALDFNPFCSKYHGVAFAKIATTLISGIDMGQPRRPLHQFSEK 778
            G++VD+LV + GV  +FV+GTTGE  SLS+SER+ +AE W+  GKDKLD +II  G+  + E++E+ +HA E GAD +A I+P FLKP  ++ L ++L+EVA+ AP  PF YYH+P+ TGVK+   +L+    +KI TF GLK S  ++ +      + + +     +G D Q L  L MGA  AV +++N++G K  ++ +A++  +   A + Q  I    N       GV+  K   TL+SGI MG PR PL + S +
Sbjct:   31 GQYVDYLVKEQGVKNIFVNGTTGEGLSLSVSERRQVAEEWVTKGKDKLDQVIIHVGALSLKESQELAQHAAEIGADGIAVIAPFFLKPWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDTDLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQKDFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASRE 291
The following BLAST results are available for this feature:
BLAST of TCONS_00010284 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NPL4.523e-6040.61N-acetylneuraminate lyase OS=Homo sapiens GN=NPL P... [more]
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