TCONS_00010283 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010283
Unique NameTCONS_00010283
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1276

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010283 ID=TCONS_00010283|Name=TCONS_00010283|organism=Clytia hemisphaerica|type=transcript|length=1276bp
CGGTGAATTATGAGGCGATTGGAAAGTTTGTCGACCATTTGGTGCAGACT
GGAGTTAACGGAGTGTTTGTATCTGGAACAACAGGTGAATTCACCAGTCT
ATCCATGAGCGAAcgaaaaatgattgctgaagcATGGCTCAAGTTTGGAA
AAGATAAGTTGGACATGATCATTATACAGTGCGGTTCATCTTGCATGGAT
GAAACTAAAGAGATGGTTCGTCATGCAAAGGAGAATGGAGCAGATGCAGT
GGCTTGTATTTCACCAAGTTTCCTCAAACCTATGAATGAAGAATATTTAT
CAGATTACTTGGAAGAGGTGGCATCAGAAGCACCCAATACACCTTTCATG
TACTATCACCTCCCATCCTTCACTGGTGTCAAAGTGGACATGTCAAAACT
GATGTCATTATGTTATGAGAAGATTGAAACATTTGCAGGATTGAAATGCT
CTTCAGAAAATATGTACGAAATGATTGTTCCTCTTAAATTCAAACCCAAA
CCTCTCAAAGTATTCTATGGATTTGATTGGCAATTTCTCGGTGGCCTTGC
AATGGGTGCTGACTGTGCAGTTTGCACGAGCTTTAACTTCATTGGTAATA
AATTTGTAGAAATCACAAAAGCTTATAAAAATGGAAACATGAAAGAAGCA
CAATCTATACAGcacAAAATTGCATTGGATTTTAATCCTTTCTGTTCTAA
ATATCATGGTGTGGCATTTGCAAAAATCGCAACCACTTTGATTTCTGGTA
TTGATATGGGTCAACCAAGACGCCCTTTGCATCAGTTCAGTGAAAAGCAA
ATCAAAGAAATCAAAGCATTTCTAACGAAGGAAGGATACCTCAAAAAATG
AGTGGACTTCCAcaggaaaaatgaaattcatcGGCTTGGATTCATCATAT
GCGATAATTCAAGGACAAAATTTACAGTCGTCGTTTATTTACaatgaaaa
actgttttttattacttttttagaATATAGTGATTTCTTAGATAATTTTG
TAAGTATTTGATCTCTTAATAtttagaattgaaaaatcttatttGAAATC
AGTGTAACCACAAACTCAATACATATTCTTTAGCTGAAATAGAGACATAG
AGACATAGTAAAAGACACTAGAATCGGGATTGGATGTGTGTTACTGGAAA
AAGTCTGGGGCTACGAATTTTGAACTTTCTAGTTTTGGATGTAAATGATC
AATTCAAACACCTCCTTCTCCcagacctggtaggatttttcaTCCAGTGG
gtttaaaaataacggactgaaactcg
Run BLAST on NCBI

transcript from alignment at sc0000104:580863..594673+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010283 ID=TCONS_00010283|Name=TCONS_00010283|organism=Clytia hemisphaerica|type=transcript|length=13811bp|location=Sequence derived from alignment at sc0000104:580863..594673+ (Clytia hemisphaerica)
CGGTGAATTATGAGGCGATTGGAAAGTTTGTCGACCATTTGGTGCAGACT
GGAGTTAACGGAGTGTTTGGTAAGAGCTTTGGTGTAAAAAACTATACAAC
CCATCGTTTAGTGGGCATacaagcccgggggggggcttgcacttaggcaa
aattaagtacggggacgtgctgctgatcagggtccctttttcagacTCTA
GAGATATCTGATAGGGTCCCAagtttactaattttcaagatgtggcCATT
TCTGTGGTCAACCTTCCGACTTATCGAGCAATATTTCTAAAGTTTGATAA
AGTTTAACCcttaaacggggggggggggttcactAAGGTTTAATCAAGGT
TTTCCTTGTGTGagctaaaaaaaatctaaaatagactgggttctaataag
aTTAATAATGAAAAAGGAGATGTTTCTTACCCAGACggtgtgacattcat
aacgtccaaataacgttatttgaacgttaaaacaacgttgtgtgccagct
gggtaggcTTCTGTGGCTCTACTACATACTGAATCATCCGTCCTTTCCAC
TATTTGCATTTTAGTATCTGGAACAACAGGTGAATTCACCAGTCTATCCA
TGAGCGAAcgaaaaatgattgctgaagcATGGCTCAAGTTTGGAAAAGAT
AAGTACGTTATTGCCCCCTTCTCCTGTCTGACTTTTAAgcacaccccttt
ctcacagacccactaggaaCCCGTCTCattgaaaaattggccaaaatact
gcccggtggaaaattatactcaaaTTTTtcccccactgaaaataatcaaa
taaaacaatccTCAATgcaaatattatgctatttttcccatctccactat
attttctgacttaaaaacaatggaattcaaatccccagccaaaaaaaata
tggaagtctcaatccccatcgagtttcagagTTTTCCCTCATCCCGAAAC
AATTTTAATCACAGACTCAGAATCGTCAGTAATCTAAGCGTTAACATGGA
CGATACATAGATTTTTATCCTTACTCTCAAAGGCTGACAAATTTCTTCCT
TGTCAATAAGAAAgagatgtttttgatgtttttaaattaTATGTGAGTAC
ATGAGAGTCTGAGCAAAGTGTATATTGTTTTacccacagatttataaagc
ccagaGGGCTAGATATCGTGTTTTAAGCCATCGctggcaaaaaaagtgaa
tatcgcaagaaATATAGTTTCTACTGTTTCTGAAAATCCTCGAAGCtcct
gaaattctattgtaattttTAGGTTGGACATGATCATTATACAGTGCGGT
TCATCTTGCATGGATGAAACTAAAGAGATGGTAGGTCTTTTATCAAAAGC
TTGAGGGATGTGCGTTATCCACCACTGAGCTTTATACTTTATACACCTTA
GTACCGGCCAACCAATACTTATCttttatttgagattttttgaaagtggt
aacCTAATGGTAGCAATAATCAATTGTGGTGTGTATGCAGCAAGAGCGct
atatatcttttttttggATACTTGTGATGTAGCCCCGTTGGATGTTATGA
AAAGTTTTGACACTGCAACTGTTTCTTTACGGGtaatcaaagatggcggg
taAAGTGAAGGATTTTTCTTATTATCATCACCCAGGTTCGTCATGCAAAG
GAGAATGGAGCAGATGCAGTGGCTTGTATTTCACCAAGTTTCCTCAAACC
TATGAATGAAGGTAAATGGCGGCACTAGTTTATGCTTTATTATAGTCGAC
CACCCCCATCCTAGATAAACCCCCttcgaaaaagttgaataaaGAGTTCG
ATATTTTATGGCATAATGATTTTTTATgtgtaaaagagaaaaaaactaaa
tttgaaaTGGCTGACGATTTGATAAAGTTGAAACTTCAAGTACTATCATA
TTTCAAACTGTTATTTTTTCTCGTACACGTTATGCAGCTCTGATCATCGA
GCATAATTTGATAAAGTCTATCTGTTACTATCGCAAAAATGGTTTAGACT
TGCCAAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGACGATAAAACCATCATCA
ATtaaaagctgataaaatttagcgttcaaaattttttataaagttcCAAA
TTTTTTAGCTGCttggtttttttttattatctgaTTCCAGAACGGTGAAT
TATGAGGCGATTGGAAAGTTTGTCGACCATTTGGTACAAACTGGAGTTAA
CGGAGTGTTTGGTAAGAGCTTTGGTGTAAAAAACTATACAACCCATCGTT
TAGTGGGCATacaagcccgggggggggcttgcacttaggcaaaattaagt
acggggacgtgctgctgatcagggtccctttttcagacTCTAGAGATATC
TGATAGGGTCCCAagtttactaattttcaagatgtggcCATTTCTGTGGT
CAACCTTCCGACTTATCGAGCAATATTTCTAAAGTTTGATAAAGTTTAAC
CcttaaacgggggggggggattcACTAAGGTTTAATCAAGGTTTTCCTTG
TGTGagctaaaaaaaatctaaaatagactgggttctaataagaTTAATAA
CGAAAAAGGAGATGTTTCTTACCCAGACggtgtgacattcataacgtcca
aataacgttatttgaacgttaaaacaacgttgtgtgccagctgggtaggc
TTCTGTGGCTCTACTACATACTGAATCATCCGTCCTTTCCACTATTTGCA
TTTTAGTATCTGGAACAACAGGTGAATTCACCAGTCTATCCATGAGCGAA
cgaaaaatgattgctgaagcATGGCTCAAGTTTGGAAAAGATAAGTACGT
TATTGCCCCGTTCTCCTGTCTGACTTTTAAgcacacccctttctcacaga
cccactaggaaCCCATCTCattgaaaaattggccaaaatactgcccggtg
gaaaattatactcaaaattttccccactgaaaataatcaaataaaacaat
ccTCAATgcaaatattatgctatttttcccatccccactatattttctga
cttaaaaacaatggaattcaaatccccagccaaaaaaaatatggaagtct
caatccccatcgagtttcagttcgttatAATTACCCCCACtagctgaaaa
aatcccactgggtctgtgagaaggctCGGTATCAGTTAGAAAGGTTTATT
AAAAGAGTTTTCCCTCATCCCGAAACAATTTTAATCACAGACTCAGAATC
GTCAGTAATCTAAGCGTTAACATGGACGATACATAGATTTTTATCCTTAC
TCTCAAAGGCTGACAAATTTCTTCCTTGTCAATAAGAAAGAGATGTTTCT
GATGTTTTATGTGAGTACATGAGAGTCTGAGCAAAGTGTATATTGTTTTa
cccacagatttataaagcccaggACTAGATATCGTGTTTTAAGGCATCGc
tggcaaaaaaagtgaatatcgcaagaTATATAGTTTCTACTGTTTCTGAA
AATCCTCGAAGCtcctgattggtcaagcgctgaaattctattgtaatttt
CAGGTTGGACATGATCATTATACAGTGCGGTTCATCTTGCATGGATGAAA
CTAAAGAGATGGTAGGTCTTTTATCAAAAGCTTGAGGGATGTGCGTTATC
CACCACTGAGCTTTATACTTTATACACCTTAGTACCGGCTTTGGTACCGG
CCAACCAATACTTATCttttatttgagattttttgaaagtggtaacCTAA
TGGTAGCAATAATCAATTGTGGTGTGTATGCAGCAAGAGCGctatatatc
ttttttttggATACTTGTGATGTAGCCCCGTTGGATGTTATGAAAAGTTT
TGACACTGCAACTGTTTCTTTACGGGtaatcaaagatggcgggtaAAGTG
AAGGATTTTTCTTATTATCATCACCCAGGTTCGTCATGCAAAGGAGAATG
GAGCAGATGCAGTGGCTTGTATTTCACCAAGTTTCCTCAAACCTATGAAT
GAAGGTAAATGGCGGCACTAGTTTATGCTTTATTATAGTCGACCACCCCC
ATCCTAGATAAACCCCCttcgaaaaagttgaataaaGAGTTCGATATTTT
ATGGCATAATGATTTTTTATgtgtaaaagagaaaaaaactaaatttgaaa
TGGCTGACGATTTGATAAAGTTGAAACTTCAAGTACTATCATATTTCAAA
CTGTTATTTTTTCTCGTACACGTTATGCAGCTCTGATCATCGAGCATAAT
TTGATAAAGTCTATCTGTTACTATCGCAAAAATGGTTTAGACTTGCCAAA
TATATAATGCTAGCTACACTTATCATCGATTTTGAGAGCTATCTTCATTA
GCTGACACCAAACGTAAACAAAAAATGATGTAGAAGTTCTCCAACGTATT
TAACTTATTTGTTTTGTCACATAGAATATTTATCAGATTACTTGGAAGAG
GTGGCATCAGAAGCACCCAATACACCTTTCATGTACTATCACCTCCCATC
CTTCACTGGTGTCAAAGGTGAGTGGTTCCTCTATTGCCCCATGTATCTAG
TCTACAGCCTAGACTGGACAATGTCAGTTGATAAGCCTTCAAAGGCGAAA
CAAAAAGTATATAtaccattgagtttgaagctcCGAAGAAGCTagaaagg
aatcttcaacctttctcaaccagaaaaagtgaagccttcaAGATTTTCCC
CGCATTTAGAAAACCACCATACAAAAACCGCGAATTTAGCCTAGGATAAG
GAAAATGGcatcatttcccatccaggagttacGTAACTAACCCCTTTGGG
GCTGTGGAAACAATGATCTTTATACCTGTCAAGTAACTTCGAAATAAATG
AGTTTTTGTTCAATACTTGTagcaaagtcgatatttttGCATGATATAAT
CTGCCTAGCTCCCAGTTCAGCTTGTAGAAAGATAACATAGCACAAATTGA
GGCCGGGATTGAGGCCAATGAATCAAGTTGTCTACCAACAgttattaaaa
acaaaatttactgcAATAATCCAGAAAATAACTTGCTCAAATTGGAATAG
GAAAGCTTATCTTGATactttaatacaataatgaccggttagtgagggct
gtactgagaaatattgcccgaggtcaagtaacgaccgagcttgcgaggtt
gttgcgttgaccgagggcaatattttcagtacagcccgaaaaaaaccggt
cattattgtatttgttaacagtttccttcagcttcgattgatttttagca
cttttaccaggaaaaatagcgaaataaagtgaaaaatacaagcgaaaaga
gatcaaaaatttttataatttctgacgtcagaaataaaaaatgagagaaa
tgatgtcaacgcattgttcattttcctttgaaaaagtgacgtcacaatga
attttccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNgacaatgtaggcccgtcgtcatg
cgaaaagaaccaattgcattgcgcaaaaagtcatgtagcccgcttcgaaa
aagtaaccggttaacaattcTCCTTATTACTCTCAGGCGAAGCCAaacta
tttgtttttttctaattgTTAGACAATCGAGCATGACTTTTACTTAGCAT
TCAACGTGGaacctgtttttttttcagccatttttttcaaattgaaattg
acaaaatcaaagaaaatgtcaaatagAATCCTTTCATCCCAAGGTCGTGA
ATAGACAGGGCGAAAATCGGGCCGtttaaactagagctaagagatttatt
tttattttacctaaCTCGCTTTAGTGGACATGTCAAAACTGATGTCATTA
TGTTATGAGAAGATTGAAACATTTGCAGGATTGAAATGCTCTTCAGAAAA
TATGTACGAAATGATTGTTCCTCTTAAATTCAAACCCAAACCTCTCAAAG
TATTCTATGGATTTGATTGGGTAAGAAACTATTTCATGTGAACATttcaa
ttgttaaaaaaatattttattgtcgTCACTCGTTCAATCGTCAAAGTCAG
ATTCGATTTCTTCAGGGGATTAAGGtggggtcaaaatgcttgcaacgtta
catAAATCATTTCTAGAAGCTCATTTTGGACTCAaattgcgaattacgca
aaatttctaaatcaaaATACATCTNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcacagcttgaaacgtc
ataacgacttataattagcaattaagtggaagaatctgactctcacagga
aagttttaagtctcttttgagaattggatgagtgattttcgataagaaat
gcaataaaaatggttcgaaaaatcatttaatgagggaaggagagtgaaca
ataatatcattactgcggacatagctagaacataagaaatcggcaaaaat
ctggttacttgtatatccagtgtataataaatccttgatctaaccaaacg
acgtttgatagcttgattttctttatgatgaaccatttagatgaacccat
agtctgcagctgggttagaaaattttctttttttcacccagccggtttcc
ggaaacactacattttcaTCTTACCCAAATATTTTCTCTTAATTCTTCAT
TTCAGCAATTTCTCGGTGGCCTTGCAATGGGTGCTGACTGTGCAGTTTGC
ACGTAAGTTGTATATCTTCAGCACTTATTAActcagctgacacacaacgt
tcttttaatgtttatctaacgttcacaacgtccacatGATGTTAGAtcaa
cgttgaaataacgttatgtgccagctgggaagatTTTTACAATATGAGGG
TTATGTATTGTCGAAAGTGTGAATTTAAGTTGATGAGTACTTATGGCCTG
TCCTAGATACCTGGGGAGAGCACTAAATTCAAAAACGACCCGTACGTGCG
GCCCGAATTTAAGTCTTTGAAATCGAATTCTTACAGTGCCGAcaaaattt
aacaaattttgggtaaatttgaGCGAAAAGTCGACCCCTTAcgatgcatt
ttcttgaaagtttttgctcagattttccaaattttacacccttagactac
actttttctcatcttcactCATTTCgatccttacagtgcactttggaaAG
CTTGGAAAAGGACCCTTAAAGGCGATCGGTAGATCGTTTACCTAATGCCC
CCACCCCGGGCCAAGATACTCGAAGTTTTCAACTTTGTTAAAACATTGAT
TACGAGTTTGAAAATTAACAGCTCTATTTAAGTTGCAGAAGAATATGCCC
TTACAGTGTAGctcttgagcagtgaaaaggtatccttacagtgcatttta
ccgaacgtttctgaCGTTTCTGAAGCAACCTGAAANagtgaaaaggtacc
cttacagtgcattttaccgaacgtttctgaCGTTTCTGAAGCAACCGGAA
CATGAGCCTGAGATGTCAGACAACTTTCAAACAAATCAAGTTGTGTGCAT
GTCAAAACCATAAAGATatatcagatttttactgtcagacgtgcaattca
gcagtccccaaacacacccttaaAGTGTATCAagctaaaagaaaactttt
gtagTGCATTCTATCAAAAGAACACCATTAGAGTGCATTTCGAGGATCTC
GATAAGGGCGTGCACATGCCGtaggtcggaccatatgagtccCCCGGGCA
TGTAGAGTACAATGCTTGATTTGATCTTTCCTTCCTTAGGAGCTTTAACT
TCATTGGTAATAAATTTGTAGAAATCACAAAAGCTTATAAAAATGGAAAC
ATGAAAGAAGCACAATCTATACAGGTAATCTTTTCCTAACCCGAATTTCC
ATCCCAATTAGTTGGAAAATACACCCAGTCCCAGTAATAGGGAAATAGTT
TAGGAGGtggggaaaatttgaaaatagtgGTTGGCCCAGGGCGGAGTAAG
TAGTtgcggaggtgtttacagtgtcCCAAACTCTACCACCACTTTTTTTT
ATCCGTAAACGGTCTGACCACAgtgttatttttttacttttaaacgaaag
cgaaagcgactgaGTTCTGATGTTTACGTATATGATTTACGTTTTAATTT
GGTGAGATTGTTATGCAAATCACCGCACTCAATACAATATTCATCCAAAA
TCTGAATAAAAAACGATCAGATTGGCGTAGCAACCCAATAGCGTAGACAA
GAagacgcaaaatttgtgtaggatagcagatttttatgacacagcaatca
tctttttatattataaatagataattacagtgtcataaaattCTGCTTTC
TTACACAAATTTTGAgaccctcctgtctacgctactgccaACCCGGGTAG
ATTCTTTTACGGAGGCATTATCTTTGGAGTGAATACGTGCCGTAAGCAGG
GTATCAGAATCTGCTCTATTGCAAACAGTAGACTTCAAAATCCCCCTGAA
AGCAAGCCAATCGCTTGTTTCTTTTCCTGCAGGTAAAACTCTACAACAGG
TCTCAAAGACAATTGTTGGCCTTATCCCAGTTGATACAATCAAGAGTAGA
AATACTTTAAAGGACTTATGTTCACCAAATtcaatttaaaattcaaaatg
ttttatttttcagcacAAAATTGCATTGGATTTTAATCCTTTCTGTTCTA
AATATCATGGTAagatttgtcgttctttatgaaatttgtcgttctttttg
tctttttttaagtAAGGCGAGAATAAATTATAACTCccttagtaaataat
gactctCCAAAACCCTTTTTCTAAAGAGGTAGGGAGTTAAAAAACTAGTT
GGATAAGACTCCCCTCCTCAAATGTCAAgcaaaagaagtcattgtattgc
ATTGCATTAACCCTAACTAACCCTAACACACTGCATTCGCAAATCTGGGA
AACAGAGTCTTTAGAATTAAAGgtttaatttggaaattttgtagATATCC
TAATTATTTGTTACTTTTGTACCTTTCTTTGTTGTTAATTTCCAACAATA
TTACAAAAGCTTGACTATATTAACCTGATCAATATATTGTGCCCCTTTTT
TCGATTCACTACCCTTTGTTGCCGAAGTCATCACAAATTTACATTGTAAG
ATTCCGAACTTCAGACTTATACTGAAAATGGATCACTTCACCTTTCCCAA
CGTATGGTTTGTTATTGTACATGGCGTTGTAAATTCACCATTTtattgtt
tatgatttttcatCGAATTTGCCCTTCAAACGAATGATTGAGAAATGTTT
TCGAATACAACGAACTGATATTGAATTAATACAAAAGCTTCTTTTGTGGC
TTGTCCTAAAAAAACTGGTAATagagaatgaaaaaaaacaaaaaaacaga
aaacaattCTACTCTgtcaatttttaaatcaagcacATCTAGATGCTTAC
CCAAGGAACACGAGGAACCAACTTCATCCATCCAACATCTTTGAAAGTCT
TCAGGCTGCCTTAGATTTTTCTGNccccccccccccgggctgcaTTCGCA
AATCTGGGAAACAGAGTCTTTAGAATTAAAGGTTTAATTTTGTAGATATC
CTAATTATTTGTTACTTTTGTACCTTTCTTTGTTGttaatttcaaacaat
ttttcaaaagcttaacTACATAGATAGGGGGAGTCATTATAAACCAGGGG
GAGTCTAAATTTGTTAGGAAATATTAGCTCTAGGGAGTCATAATTTActa
gtttataagaactggGGAGTCATAATAAACTAGTGAATTTTTAACTGGGG
AGTCACAATAATCTAGTTTATTATGACTGGGGGGTTATAATTTAGGGGAG
TTGAAATTAACTGTGACACCGGAATGCAGGTGAATGAAAAAAACTCTCAT
GCGGccggttggaaaattttttgttgatatttttgataacttaatcattg
aaatagaactatAAAGATAACTGTTATGTACAAagaaacagtatgaagta
agccctgaatactaatgcaTCAATAttactaacgaacaaaacttgattta
caagcaggaatatctaaccaaacgacgttgGATAGCTTCAACGGTCaact
tcattttctttatgatgaaacatatagatgaacccatagtctgcgacCGG
GTCaggaaatctttttatttttgcctaatGCAGGATTTGTTACACAGACC
CCCTCCaagaaaaagtgacgaaaattatttgtttttgttctAGGTGTGGC
ATTTGCAAAAATCGCAACCACTTTGATTTCTGGTATTGATATGGGTCAAC
CAAGACGCCCTTTGCATCAGTTCAGTGAAAAGCAAATCAAAGAAATCAAA
GCATTTCTAACGAAGGAAGGATACCTCAAAAAATGAGTGGACTTCCAcag
gaaaaatgaaattcatcGGCTTGGATTCATCATATGCGATAATTCAAGGA
CAAAATTTACAGTCGTCGTTTATTTACaatgaaaaactgttttttattac
ttttttagaATATAGTGATTTCTTAGATAATTTTGTAAGTATTTGATCTC
TTAATAtttagaattgaaaaatcttatttGAAATCAGTGTAACCACAAAC
TCAATACATATTCTTTAGCTGAAATAGAGACATAGAGACATAGTAAAAGA
CACTAGAATCGGGATTGGATGTGTGTTACTGGAAAAAGTCTGGGGCTACG
AATTTTGAACTTTCTAGTTTTGGATGTAAATGATCAATTCAAACACCTCC
TTCTCCcagacctggtaggatttttcaTCCAGTGGgtttaaaaataacgg
actgaaactcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005777XLOC_005777Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010283-exon-sc0000104-1491911889:580863..580931TCONS_00010283-exon-sc0000104-1491911889:580863..580931Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1510915933:580863..580931TCONS_00010283-exon-sc0000104-1510915933:580863..580931Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1575043694:580863..580931TCONS_00010283-exon-sc0000104-1575043694:580863..580931Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1491911889:581427..581514TCONS_00010283-exon-sc0000104-1491911889:581427..581514Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1510915933:581427..581514TCONS_00010283-exon-sc0000104-1510915933:581427..581514Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1575043694:581427..581514TCONS_00010283-exon-sc0000104-1575043694:581427..581514Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1491911889:582135..582192TCONS_00010283-exon-sc0000104-1491911889:582135..582192Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1510915933:582135..582192TCONS_00010283-exon-sc0000104-1510915933:582135..582192Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1575043694:582135..582192TCONS_00010283-exon-sc0000104-1575043694:582135..582192Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1491911889:587141..587216TCONS_00010283-exon-sc0000104-1491911889:587141..587216Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1510915933:587141..587216TCONS_00010283-exon-sc0000104-1510915933:587141..587216Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1575043694:587141..587216TCONS_00010283-exon-sc0000104-1575043694:587141..587216Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1491911889:587637..587729TCONS_00010283-exon-sc0000104-1491911889:587637..587729Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1510915933:587637..587729TCONS_00010283-exon-sc0000104-1510915933:587637..587729Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1575043694:587637..587729TCONS_00010283-exon-sc0000104-1575043694:587637..587729Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1491911889:589137..589282TCONS_00010283-exon-sc0000104-1491911889:589137..589282Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1510915933:589137..589282TCONS_00010283-exon-sc0000104-1510915933:589137..589282Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1575043694:589137..589282TCONS_00010283-exon-sc0000104-1575043694:589137..589282Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1491911889:590568..590614TCONS_00010283-exon-sc0000104-1491911889:590568..590614Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1510915933:590568..590614TCONS_00010283-exon-sc0000104-1510915933:590568..590614Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1575043694:590568..590614TCONS_00010283-exon-sc0000104-1575043694:590568..590614Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1491911889:591652..591736TCONS_00010283-exon-sc0000104-1491911889:591652..591736Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1510915933:591652..591736TCONS_00010283-exon-sc0000104-1510915933:591652..591736Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1575043694:591652..591736TCONS_00010283-exon-sc0000104-1575043694:591652..591736Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1491911889:592526..592571TCONS_00010283-exon-sc0000104-1491911889:592526..592571Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1510915933:592526..592571TCONS_00010283-exon-sc0000104-1510915933:592526..592571Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1575043694:592526..592571TCONS_00010283-exon-sc0000104-1575043694:592526..592571Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1491911889:594106..594673TCONS_00010283-exon-sc0000104-1491911889:594106..594673Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1510915933:594106..594673TCONS_00010283-exon-sc0000104-1510915933:594106..594673Clytia hemisphaericaexon
TCONS_00010283-exon-sc0000104-1575043694:594106..594673TCONS_00010283-exon-sc0000104-1575043694:594106..594673Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:580863..594673 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.69239	2.96581	7.00634	1.14197	0	0	0	0	0	0	0	0	0	0	4.65454e-09	1.77065e-07	0	0	3.6078e-09	7.77336e-09	2.25332	16.719	0	0	0	0.0136411
Blast
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BLAST of TCONS_00010283 vs. Swiss-Prot (Human)
Match: NPL (N-acetylneuraminate lyase OS=Homo sapiens GN=NPL PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 2.359e-62
Identity = 108/267 (40.45%), Postives = 164/267 (61.42%), Query Frame = 3 
Query:    3 VNYEAIGKFVDHLV-QTGVNGVFVSGTTGEFTSLSMSERKMIAEAWLKFGKDKLDMIIIQCGSSCMDETKEMVRHAKENGADAVACISPSFLKPMNEEYLSDYLEEVASEAPNTPFMYYHLPSFTGVKVDMSKLMSLCYEKIETFAGLKCSSENMYEMIX-XXXXXXXXXXXXYGFDWQFLGGLAMGADCAVCTSFNFIGNKFVEITKAYKNGNMKEAQSIQHKIALDFNPFCSKYHGVAFAKIATTLISGIDMGQPRRPLHQFSEK 797
            +N+  IG++VD+LV + GV  +FV+GTTGE  SLS+SER+ +AE W+  GKDKLD +II  G+  + E++E+ +HA E GAD +A I+P FLKP  ++ L ++L+EVA+ AP  PF YYH+P+ TGVK+   +L+    +KI TF GLK S  ++ +      + + +     +G D Q L  L MGA  AV +++N++G K  ++ +A++  +   A + Q  I    N       GV+  K   TL+SGI MG PR PL + S +
Sbjct:   25 INFSVIGQYVDYLVKEQGVKNIFVNGTTGEGLSLSVSERRQVAEEWVTKGKDKLDQVIIHVGALSLKESQELAQHAAEIGADGIAVIAPFFLKPWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDTDLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQKDFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASRE 291
The following BLAST results are available for this feature:
BLAST of TCONS_00010283 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NPL2.359e-6240.45N-acetylneuraminate lyase OS=Homo sapiens GN=NPL P... [more]
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