TCONS_00010282 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010282
Unique NameTCONS_00010282
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1277

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010282 ID=TCONS_00010282|Name=TCONS_00010282|organism=Clytia hemisphaerica|type=transcript|length=1277bp
ACGGTGAATTATGAGGCGATTGGAAAGTTTGTCGACCATTTGGTGCAGAC
TGGAGTTAACGGAGTGTTTGTATCTGGAACAACAGGTGAATTCACCAGTC
TATCCATGAGCGAAcgaaaaatgattgctgaagcATGGCTCAAGTTTGGA
AAAGATAAGTTGGACATGATCATTATACAGTGCGGTTCATCTTGCATGGA
TGAAACTAAAGAGATGGTTCGTCATGCAAAGGAGAATGGAGCAGATGCAG
TGGCTTGTATTTCACCAAGTTTCCTCAAACCTATGAATGAAGAATATTTA
TCAGATTACTTGGAAGAGGTGGCATCAGAAGCACCCAATACACCTTTCAT
GTACTATCACCTCCCATCCTTCACTGGTGTCAAAGTGGACATGTCAAAAC
TGATGTCATTATGTTATGAGAAGATTGAAACATTTGCAGGATTGAAATGC
TCTTCAGAAAATATGTACGAAATGATTGTTCCTCTTAAATTCAAACCCAA
ACCTCTCAAAGTATTCTATGGATTTGATTGGCAATTTCTCGGTGGCCTTG
CAATGGGTGCTGACTGTGCAGTTTGCACGAGCTTTAACTTCATTGGTAAT
AAATTTGTAGAAATCACAAAAGCTTATAAAAATGGAAACATGAAAGAAGC
ACAATCTATACAGcacAAAATTGCATTGGATTTTAATCCTTTCTGTTCTA
AATATCATGGTGTGGCATTTGCAAAAATCGCAACCACTTTGATTTCTGGT
ATTGATATGGGTCAACCAAGACGCCCTTTGCATCAGTTCAGTGAAAAGCA
AATCAAAGAAATCAAAGCATTTCTAACGAAGGAAGGATACCTCAAAAAAT
GAGTGGACTTCCAcaggaaaaatgaaattcatcGGCTTGGATTCATCATA
TGCGATAATTCAAGGACAAAATTTACAGTCGTCGTTTATTTACaatgaaa
aactgttttttattacttttttagaATATAGTGATTTCTTAGATAATTTT
GTAAGTATTTGATCTCTTAATAtttagaattgaaaaatcttatttGAAAT
CAGTGTAACCACAAACTCAATACATATTCTTTAGCTGAAATAGAGACATA
GAGACATAGTAAAAGACACTAGAATCGGGATTGGATGTGTGTTACTGGAA
AAAGTCTGGGGCTACGAATTTTGAACTTTCTAGTTTTGGATGTAAATGAT
CAATTCAAACACCTCCTTCTCCcagacctggtaggatttttcaTCCAGTG
Ggtttaaaaataacggactgaaactcg
Run BLAST on NCBI

transcript from alignment at sc0000104:580862..594673+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010282 ID=TCONS_00010282|Name=TCONS_00010282|organism=Clytia hemisphaerica|type=transcript|length=13812bp|location=Sequence derived from alignment at sc0000104:580862..594673+ (Clytia hemisphaerica)
ACGGTGAATTATGAGGCGATTGGAAAGTTTGTCGACCATTTGGTGCAGAC
TGGAGTTAACGGAGTGTTTGGTAAGAGCTTTGGTGTAAAAAACTATACAA
CCCATCGTTTAGTGGGCATacaagcccgggggggggcttgcacttaggca
aaattaagtacggggacgtgctgctgatcagggtccctttttcagacTCT
AGAGATATCTGATAGGGTCCCAagtttactaattttcaagatgtggcCAT
TTCTGTGGTCAACCTTCCGACTTATCGAGCAATATTTCTAAAGTTTGATA
AAGTTTAACCcttaaacggggggggggggttcactAAGGTTTAATCAAGG
TTTTCCTTGTGTGagctaaaaaaaatctaaaatagactgggttctaataa
gaTTAATAATGAAAAAGGAGATGTTTCTTACCCAGACggtgtgacattca
taacgtccaaataacgttatttgaacgttaaaacaacgttgtgtgccagc
tgggtaggcTTCTGTGGCTCTACTACATACTGAATCATCCGTCCTTTCCA
CTATTTGCATTTTAGTATCTGGAACAACAGGTGAATTCACCAGTCTATCC
ATGAGCGAAcgaaaaatgattgctgaagcATGGCTCAAGTTTGGAAAAGA
TAAGTACGTTATTGCCCCCTTCTCCTGTCTGACTTTTAAgcacacccctt
tctcacagacccactaggaaCCCGTCTCattgaaaaattggccaaaatac
tgcccggtggaaaattatactcaaaTTTTtcccccactgaaaataatcaa
ataaaacaatccTCAATgcaaatattatgctatttttcccatctccacta
tattttctgacttaaaaacaatggaattcaaatccccagccaaaaaaaat
atggaagtctcaatccccatcgagtttcagagTTTTCCCTCATCCCGAAA
CAATTTTAATCACAGACTCAGAATCGTCAGTAATCTAAGCGTTAACATGG
ACGATACATAGATTTTTATCCTTACTCTCAAAGGCTGACAAATTTCTTCC
TTGTCAATAAGAAAgagatgtttttgatgtttttaaattaTATGTGAGTA
CATGAGAGTCTGAGCAAAGTGTATATTGTTTTacccacagatttataaag
cccagaGGGCTAGATATCGTGTTTTAAGCCATCGctggcaaaaaaagtga
atatcgcaagaaATATAGTTTCTACTGTTTCTGAAAATCCTCGAAGCtcc
tgaaattctattgtaattttTAGGTTGGACATGATCATTATACAGTGCGG
TTCATCTTGCATGGATGAAACTAAAGAGATGGTAGGTCTTTTATCAAAAG
CTTGAGGGATGTGCGTTATCCACCACTGAGCTTTATACTTTATACACCTT
AGTACCGGCCAACCAATACTTATCttttatttgagattttttgaaagtgg
taacCTAATGGTAGCAATAATCAATTGTGGTGTGTATGCAGCAAGAGCGc
tatatatcttttttttggATACTTGTGATGTAGCCCCGTTGGATGTTATG
AAAAGTTTTGACACTGCAACTGTTTCTTTACGGGtaatcaaagatggcgg
gtaAAGTGAAGGATTTTTCTTATTATCATCACCCAGGTTCGTCATGCAAA
GGAGAATGGAGCAGATGCAGTGGCTTGTATTTCACCAAGTTTCCTCAAAC
CTATGAATGAAGGTAAATGGCGGCACTAGTTTATGCTTTATTATAGTCGA
CCACCCCCATCCTAGATAAACCCCCttcgaaaaagttgaataaaGAGTTC
GATATTTTATGGCATAATGATTTTTTATgtgtaaaagagaaaaaaactaa
atttgaaaTGGCTGACGATTTGATAAAGTTGAAACTTCAAGTACTATCAT
ATTTCAAACTGTTATTTTTTCTCGTACACGTTATGCAGCTCTGATCATCG
AGCATAATTTGATAAAGTCTATCTGTTACTATCGCAAAAATGGTTTAGAC
TTGCCAAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGACGATAAAACCATCATC
AATtaaaagctgataaaatttagcgttcaaaattttttataaagttcCAA
ATTTTTTAGCTGCttggtttttttttattatctgaTTCCAGAACGGTGAA
TTATGAGGCGATTGGAAAGTTTGTCGACCATTTGGTACAAACTGGAGTTA
ACGGAGTGTTTGGTAAGAGCTTTGGTGTAAAAAACTATACAACCCATCGT
TTAGTGGGCATacaagcccgggggggggcttgcacttaggcaaaattaag
tacggggacgtgctgctgatcagggtccctttttcagacTCTAGAGATAT
CTGATAGGGTCCCAagtttactaattttcaagatgtggcCATTTCTGTGG
TCAACCTTCCGACTTATCGAGCAATATTTCTAAAGTTTGATAAAGTTTAA
CCcttaaacgggggggggggattcACTAAGGTTTAATCAAGGTTTTCCTT
GTGTGagctaaaaaaaatctaaaatagactgggttctaataagaTTAATA
ACGAAAAAGGAGATGTTTCTTACCCAGACggtgtgacattcataacgtcc
aaataacgttatttgaacgttaaaacaacgttgtgtgccagctgggtagg
cTTCTGTGGCTCTACTACATACTGAATCATCCGTCCTTTCCACTATTTGC
ATTTTAGTATCTGGAACAACAGGTGAATTCACCAGTCTATCCATGAGCGA
AcgaaaaatgattgctgaagcATGGCTCAAGTTTGGAAAAGATAAGTACG
TTATTGCCCCGTTCTCCTGTCTGACTTTTAAgcacacccctttctcacag
acccactaggaaCCCATCTCattgaaaaattggccaaaatactgcccggt
ggaaaattatactcaaaattttccccactgaaaataatcaaataaaacaa
tccTCAATgcaaatattatgctatttttcccatccccactatattttctg
acttaaaaacaatggaattcaaatccccagccaaaaaaaatatggaagtc
tcaatccccatcgagtttcagttcgttatAATTACCCCCACtagctgaaa
aaatcccactgggtctgtgagaaggctCGGTATCAGTTAGAAAGGTTTAT
TAAAAGAGTTTTCCCTCATCCCGAAACAATTTTAATCACAGACTCAGAAT
CGTCAGTAATCTAAGCGTTAACATGGACGATACATAGATTTTTATCCTTA
CTCTCAAAGGCTGACAAATTTCTTCCTTGTCAATAAGAAAGAGATGTTTC
TGATGTTTTATGTGAGTACATGAGAGTCTGAGCAAAGTGTATATTGTTTT
acccacagatttataaagcccaggACTAGATATCGTGTTTTAAGGCATCG
ctggcaaaaaaagtgaatatcgcaagaTATATAGTTTCTACTGTTTCTGA
AAATCCTCGAAGCtcctgattggtcaagcgctgaaattctattgtaattt
tCAGGTTGGACATGATCATTATACAGTGCGGTTCATCTTGCATGGATGAA
ACTAAAGAGATGGTAGGTCTTTTATCAAAAGCTTGAGGGATGTGCGTTAT
CCACCACTGAGCTTTATACTTTATACACCTTAGTACCGGCTTTGGTACCG
GCCAACCAATACTTATCttttatttgagattttttgaaagtggtaacCTA
ATGGTAGCAATAATCAATTGTGGTGTGTATGCAGCAAGAGCGctatatat
cttttttttggATACTTGTGATGTAGCCCCGTTGGATGTTATGAAAAGTT
TTGACACTGCAACTGTTTCTTTACGGGtaatcaaagatggcgggtaAAGT
GAAGGATTTTTCTTATTATCATCACCCAGGTTCGTCATGCAAAGGAGAAT
GGAGCAGATGCAGTGGCTTGTATTTCACCAAGTTTCCTCAAACCTATGAA
TGAAGGTAAATGGCGGCACTAGTTTATGCTTTATTATAGTCGACCACCCC
CATCCTAGATAAACCCCCttcgaaaaagttgaataaaGAGTTCGATATTT
TATGGCATAATGATTTTTTATgtgtaaaagagaaaaaaactaaatttgaa
aTGGCTGACGATTTGATAAAGTTGAAACTTCAAGTACTATCATATTTCAA
ACTGTTATTTTTTCTCGTACACGTTATGCAGCTCTGATCATCGAGCATAA
TTTGATAAAGTCTATCTGTTACTATCGCAAAAATGGTTTAGACTTGCCAA
ATATATAATGCTAGCTACACTTATCATCGATTTTGAGAGCTATCTTCATT
AGCTGACACCAAACGTAAACAAAAAATGATGTAGAAGTTCTCCAACGTAT
TTAACTTATTTGTTTTGTCACATAGAATATTTATCAGATTACTTGGAAGA
GGTGGCATCAGAAGCACCCAATACACCTTTCATGTACTATCACCTCCCAT
CCTTCACTGGTGTCAAAGGTGAGTGGTTCCTCTATTGCCCCATGTATCTA
GTCTACAGCCTAGACTGGACAATGTCAGTTGATAAGCCTTCAAAGGCGAA
ACAAAAAGTATATAtaccattgagtttgaagctcCGAAGAAGCTagaaag
gaatcttcaacctttctcaaccagaaaaagtgaagccttcaAGATTTTCC
CCGCATTTAGAAAACCACCATACAAAAACCGCGAATTTAGCCTAGGATAA
GGAAAATGGcatcatttcccatccaggagttacGTAACTAACCCCTTTGG
GGCTGTGGAAACAATGATCTTTATACCTGTCAAGTAACTTCGAAATAAAT
GAGTTTTTGTTCAATACTTGTagcaaagtcgatatttttGCATGATATAA
TCTGCCTAGCTCCCAGTTCAGCTTGTAGAAAGATAACATAGCACAAATTG
AGGCCGGGATTGAGGCCAATGAATCAAGTTGTCTACCAACAgttattaaa
aacaaaatttactgcAATAATCCAGAAAATAACTTGCTCAAATTGGAATA
GGAAAGCTTATCTTGATactttaatacaataatgaccggttagtgagggc
tgtactgagaaatattgcccgaggtcaagtaacgaccgagcttgcgaggt
tgttgcgttgaccgagggcaatattttcagtacagcccgaaaaaaaccgg
tcattattgtatttgttaacagtttccttcagcttcgattgatttttagc
acttttaccaggaaaaatagcgaaataaagtgaaaaatacaagcgaaaag
agatcaaaaatttttataatttctgacgtcagaaataaaaaatgagagaa
atgatgtcaacgcattgttcattttcctttgaaaaagtgacgtcacaatg
aattttccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNgacaatgtaggcccgtcgtcat
gcgaaaagaaccaattgcattgcgcaaaaagtcatgtagcccgcttcgaa
aaagtaaccggttaacaattcTCCTTATTACTCTCAGGCGAAGCCAaact
atttgtttttttctaattgTTAGACAATCGAGCATGACTTTTACTTAGCA
TTCAACGTGGaacctgtttttttttcagccatttttttcaaattgaaatt
gacaaaatcaaagaaaatgtcaaatagAATCCTTTCATCCCAAGGTCGTG
AATAGACAGGGCGAAAATCGGGCCGtttaaactagagctaagagatttat
ttttattttacctaaCTCGCTTTAGTGGACATGTCAAAACTGATGTCATT
ATGTTATGAGAAGATTGAAACATTTGCAGGATTGAAATGCTCTTCAGAAA
ATATGTACGAAATGATTGTTCCTCTTAAATTCAAACCCAAACCTCTCAAA
GTATTCTATGGATTTGATTGGGTAAGAAACTATTTCATGTGAACATttca
attgttaaaaaaatattttattgtcgTCACTCGTTCAATCGTCAAAGTCA
GATTCGATTTCTTCAGGGGATTAAGGtggggtcaaaatgcttgcaacgtt
acatAAATCATTTCTAGAAGCTCATTTTGGACTCAaattgcgaattacgc
aaaatttctaaatcaaaATACATCTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcacagcttgaaacgt
cataacgacttataattagcaattaagtggaagaatctgactctcacagg
aaagttttaagtctcttttgagaattggatgagtgattttcgataagaaa
tgcaataaaaatggttcgaaaaatcatttaatgagggaaggagagtgaac
aataatatcattactgcggacatagctagaacataagaaatcggcaaaaa
tctggttacttgtatatccagtgtataataaatccttgatctaaccaaac
gacgtttgatagcttgattttctttatgatgaaccatttagatgaaccca
tagtctgcagctgggttagaaaattttctttttttcacccagccggtttc
cggaaacactacattttcaTCTTACCCAAATATTTTCTCTTAATTCTTCA
TTTCAGCAATTTCTCGGTGGCCTTGCAATGGGTGCTGACTGTGCAGTTTG
CACGTAAGTTGTATATCTTCAGCACTTATTAActcagctgacacacaacg
ttcttttaatgtttatctaacgttcacaacgtccacatGATGTTAGAtca
acgttgaaataacgttatgtgccagctgggaagatTTTTACAATATGAGG
GTTATGTATTGTCGAAAGTGTGAATTTAAGTTGATGAGTACTTATGGCCT
GTCCTAGATACCTGGGGAGAGCACTAAATTCAAAAACGACCCGTACGTGC
GGCCCGAATTTAAGTCTTTGAAATCGAATTCTTACAGTGCCGAcaaaatt
taacaaattttgggtaaatttgaGCGAAAAGTCGACCCCTTAcgatgcat
tttcttgaaagtttttgctcagattttccaaattttacacccttagacta
cactttttctcatcttcactCATTTCgatccttacagtgcactttggaaA
GCTTGGAAAAGGACCCTTAAAGGCGATCGGTAGATCGTTTACCTAATGCC
CCCACCCCGGGCCAAGATACTCGAAGTTTTCAACTTTGTTAAAACATTGA
TTACGAGTTTGAAAATTAACAGCTCTATTTAAGTTGCAGAAGAATATGCC
CTTACAGTGTAGctcttgagcagtgaaaaggtatccttacagtgcatttt
accgaacgtttctgaCGTTTCTGAAGCAACCTGAAANagtgaaaaggtac
ccttacagtgcattttaccgaacgtttctgaCGTTTCTGAAGCAACCGGA
ACATGAGCCTGAGATGTCAGACAACTTTCAAACAAATCAAGTTGTGTGCA
TGTCAAAACCATAAAGATatatcagatttttactgtcagacgtgcaattc
agcagtccccaaacacacccttaaAGTGTATCAagctaaaagaaaacttt
tgtagTGCATTCTATCAAAAGAACACCATTAGAGTGCATTTCGAGGATCT
CGATAAGGGCGTGCACATGCCGtaggtcggaccatatgagtccCCCGGGC
ATGTAGAGTACAATGCTTGATTTGATCTTTCCTTCCTTAGGAGCTTTAAC
TTCATTGGTAATAAATTTGTAGAAATCACAAAAGCTTATAAAAATGGAAA
CATGAAAGAAGCACAATCTATACAGGTAATCTTTTCCTAACCCGAATTTC
CATCCCAATTAGTTGGAAAATACACCCAGTCCCAGTAATAGGGAAATAGT
TTAGGAGGtggggaaaatttgaaaatagtgGTTGGCCCAGGGCGGAGTAA
GTAGTtgcggaggtgtttacagtgtcCCAAACTCTACCACCACTTTTTTT
TATCCGTAAACGGTCTGACCACAgtgttatttttttacttttaaacgaaa
gcgaaagcgactgaGTTCTGATGTTTACGTATATGATTTACGTTTTAATT
TGGTGAGATTGTTATGCAAATCACCGCACTCAATACAATATTCATCCAAA
ATCTGAATAAAAAACGATCAGATTGGCGTAGCAACCCAATAGCGTAGACA
AGAagacgcaaaatttgtgtaggatagcagatttttatgacacagcaatc
atctttttatattataaatagataattacagtgtcataaaattCTGCTTT
CTTACACAAATTTTGAgaccctcctgtctacgctactgccaACCCGGGTA
GATTCTTTTACGGAGGCATTATCTTTGGAGTGAATACGTGCCGTAAGCAG
GGTATCAGAATCTGCTCTATTGCAAACAGTAGACTTCAAAATCCCCCTGA
AAGCAAGCCAATCGCTTGTTTCTTTTCCTGCAGGTAAAACTCTACAACAG
GTCTCAAAGACAATTGTTGGCCTTATCCCAGTTGATACAATCAAGAGTAG
AAATACTTTAAAGGACTTATGTTCACCAAATtcaatttaaaattcaaaat
gttttatttttcagcacAAAATTGCATTGGATTTTAATCCTTTCTGTTCT
AAATATCATGGTAagatttgtcgttctttatgaaatttgtcgttcttttt
gtctttttttaagtAAGGCGAGAATAAATTATAACTCccttagtaaataa
tgactctCCAAAACCCTTTTTCTAAAGAGGTAGGGAGTTAAAAAACTAGT
TGGATAAGACTCCCCTCCTCAAATGTCAAgcaaaagaagtcattgtattg
cATTGCATTAACCCTAACTAACCCTAACACACTGCATTCGCAAATCTGGG
AAACAGAGTCTTTAGAATTAAAGgtttaatttggaaattttgtagATATC
CTAATTATTTGTTACTTTTGTACCTTTCTTTGTTGTTAATTTCCAACAAT
ATTACAAAAGCTTGACTATATTAACCTGATCAATATATTGTGCCCCTTTT
TTCGATTCACTACCCTTTGTTGCCGAAGTCATCACAAATTTACATTGTAA
GATTCCGAACTTCAGACTTATACTGAAAATGGATCACTTCACCTTTCCCA
ACGTATGGTTTGTTATTGTACATGGCGTTGTAAATTCACCATTTtattgt
ttatgatttttcatCGAATTTGCCCTTCAAACGAATGATTGAGAAATGTT
TTCGAATACAACGAACTGATATTGAATTAATACAAAAGCTTCTTTTGTGG
CTTGTCCTAAAAAAACTGGTAATagagaatgaaaaaaaacaaaaaaacag
aaaacaattCTACTCTgtcaatttttaaatcaagcacATCTAGATGCTTA
CCCAAGGAACACGAGGAACCAACTTCATCCATCCAACATCTTTGAAAGTC
TTCAGGCTGCCTTAGATTTTTCTGNccccccccccccgggctgcaTTCGC
AAATCTGGGAAACAGAGTCTTTAGAATTAAAGGTTTAATTTTGTAGATAT
CCTAATTATTTGTTACTTTTGTACCTTTCTTTGTTGttaatttcaaacaa
tttttcaaaagcttaacTACATAGATAGGGGGAGTCATTATAAACCAGGG
GGAGTCTAAATTTGTTAGGAAATATTAGCTCTAGGGAGTCATAATTTAct
agtttataagaactggGGAGTCATAATAAACTAGTGAATTTTTAACTGGG
GAGTCACAATAATCTAGTTTATTATGACTGGGGGGTTATAATTTAGGGGA
GTTGAAATTAACTGTGACACCGGAATGCAGGTGAATGAAAAAAACTCTCA
TGCGGccggttggaaaattttttgttgatatttttgataacttaatcatt
gaaatagaactatAAAGATAACTGTTATGTACAAagaaacagtatgaagt
aagccctgaatactaatgcaTCAATAttactaacgaacaaaacttgattt
acaagcaggaatatctaaccaaacgacgttgGATAGCTTCAACGGTCaac
ttcattttctttatgatgaaacatatagatgaacccatagtctgcgacCG
GGTCaggaaatctttttatttttgcctaatGCAGGATTTGTTACACAGAC
CCCCTCCaagaaaaagtgacgaaaattatttgtttttgttctAGGTGTGG
CATTTGCAAAAATCGCAACCACTTTGATTTCTGGTATTGATATGGGTCAA
CCAAGACGCCCTTTGCATCAGTTCAGTGAAAAGCAAATCAAAGAAATCAA
AGCATTTCTAACGAAGGAAGGATACCTCAAAAAATGAGTGGACTTCCAca
ggaaaaatgaaattcatcGGCTTGGATTCATCATATGCGATAATTCAAGG
ACAAAATTTACAGTCGTCGTTTATTTACaatgaaaaactgttttttatta
cttttttagaATATAGTGATTTCTTAGATAATTTTGTAAGTATTTGATCT
CTTAATAtttagaattgaaaaatcttatttGAAATCAGTGTAACCACAAA
CTCAATACATATTCTTTAGCTGAAATAGAGACATAGAGACATAGTAAAAG
ACACTAGAATCGGGATTGGATGTGTGTTACTGGAAAAAGTCTGGGGCTAC
GAATTTTGAACTTTCTAGTTTTGGATGTAAATGATCAATTCAAACACCTC
CTTCTCCcagacctggtaggatttttcaTCCAGTGGgtttaaaaataacg
gactgaaactcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005777XLOC_005777Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010282-exon-sc0000104-1491911889:580862..580931TCONS_00010282-exon-sc0000104-1491911889:580862..580931Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1510915933:580862..580931TCONS_00010282-exon-sc0000104-1510915933:580862..580931Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1575043694:580862..580931TCONS_00010282-exon-sc0000104-1575043694:580862..580931Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1491911889:581427..581514TCONS_00010282-exon-sc0000104-1491911889:581427..581514Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1510915933:581427..581514TCONS_00010282-exon-sc0000104-1510915933:581427..581514Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1575043694:581427..581514TCONS_00010282-exon-sc0000104-1575043694:581427..581514Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1491911889:582135..582192TCONS_00010282-exon-sc0000104-1491911889:582135..582192Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1510915933:582135..582192TCONS_00010282-exon-sc0000104-1510915933:582135..582192Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1575043694:582135..582192TCONS_00010282-exon-sc0000104-1575043694:582135..582192Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1491911889:582498..582573TCONS_00010282-exon-sc0000104-1491911889:582498..582573Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1510915933:582498..582573TCONS_00010282-exon-sc0000104-1510915933:582498..582573Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1575043694:582498..582573TCONS_00010282-exon-sc0000104-1575043694:582498..582573Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1491911889:587637..587729TCONS_00010282-exon-sc0000104-1491911889:587637..587729Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1510915933:587637..587729TCONS_00010282-exon-sc0000104-1510915933:587637..587729Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1575043694:587637..587729TCONS_00010282-exon-sc0000104-1575043694:587637..587729Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1491911889:589137..589282TCONS_00010282-exon-sc0000104-1491911889:589137..589282Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1510915933:589137..589282TCONS_00010282-exon-sc0000104-1510915933:589137..589282Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1575043694:589137..589282TCONS_00010282-exon-sc0000104-1575043694:589137..589282Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1491911889:590568..590614TCONS_00010282-exon-sc0000104-1491911889:590568..590614Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1510915933:590568..590614TCONS_00010282-exon-sc0000104-1510915933:590568..590614Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1575043694:590568..590614TCONS_00010282-exon-sc0000104-1575043694:590568..590614Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1491911889:591652..591736TCONS_00010282-exon-sc0000104-1491911889:591652..591736Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1510915933:591652..591736TCONS_00010282-exon-sc0000104-1510915933:591652..591736Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1575043694:591652..591736TCONS_00010282-exon-sc0000104-1575043694:591652..591736Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1491911889:592526..592571TCONS_00010282-exon-sc0000104-1491911889:592526..592571Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1510915933:592526..592571TCONS_00010282-exon-sc0000104-1510915933:592526..592571Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1575043694:592526..592571TCONS_00010282-exon-sc0000104-1575043694:592526..592571Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1491911889:594106..594673TCONS_00010282-exon-sc0000104-1491911889:594106..594673Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1510915933:594106..594673TCONS_00010282-exon-sc0000104-1510915933:594106..594673Clytia hemisphaericaexon
TCONS_00010282-exon-sc0000104-1575043694:594106..594673TCONS_00010282-exon-sc0000104-1575043694:594106..594673Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:580862..594673 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.20092	0.901691	41.4731	37.4635	0	0	0	0	0	0	0	0	0	0	2.65499e-08	1.08118e-06	0	0	5.13768e-08	2.15915e-08	0.662977	4.92372	0	0	0	0.254021
Blast
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BLAST of TCONS_00010282 vs. Swiss-Prot (Human)
Match: NPL (N-acetylneuraminate lyase OS=Homo sapiens GN=NPL PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 2.023e-62
Identity = 108/267 (40.45%), Postives = 164/267 (61.42%), Query Frame = 1 
Query:    4 VNYEAIGKFVDHLV-QTGVNGVFVSGTTGEFTSLSMSERKMIAEAWLKFGKDKLDMIIIQCGSSCMDETKEMVRHAKENGADAVACISPSFLKPMNEEYLSDYLEEVASEAPNTPFMYYHLPSFTGVKVDMSKLMSLCYEKIETFAGLKCSSENMYEMIX-XXXXXXXXXXXXYGFDWQFLGGLAMGADCAVCTSFNFIGNKFVEITKAYKNGNMKEAQSIQHKIALDFNPFCSKYHGVAFAKIATTLISGIDMGQPRRPLHQFSEK 798
            +N+  IG++VD+LV + GV  +FV+GTTGE  SLS+SER+ +AE W+  GKDKLD +II  G+  + E++E+ +HA E GAD +A I+P FLKP  ++ L ++L+EVA+ AP  PF YYH+P+ TGVK+   +L+    +KI TF GLK S  ++ +      + + +     +G D Q L  L MGA  AV +++N++G K  ++ +A++  +   A + Q  I    N       GV+  K   TL+SGI MG PR PL + S +
Sbjct:   25 INFSVIGQYVDYLVKEQGVKNIFVNGTTGEGLSLSVSERRQVAEEWVTKGKDKLDQVIIHVGALSLKESQELAQHAAEIGADGIAVIAPFFLKPWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDTDLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQKDFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASRE 291
The following BLAST results are available for this feature:
BLAST of TCONS_00010282 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NPL2.023e-6240.45N-acetylneuraminate lyase OS=Homo sapiens GN=NPL P... [more]
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