TCONS_00010278 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010278
Unique NameTCONS_00010278
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1282

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010278 ID=TCONS_00010278|Name=TCONS_00010278|organism=Clytia hemisphaerica|type=transcript|length=1282bp
CCAGAACGGTGAATTATGAGGCGATTGGAAAGTTTGTCGACCATTTGGTA
CAAACTGGAGTTAACGGAGTGTTTGTATCTGGAACAACAGGTGAATTCAC
CAGTCTATCCATGAGCGAAcgaaaaatgattgctgaagcATGGCTCAAGT
TTGGAAAAGATAAGTTGGACATGATCATTATACAGTGCGGTTCATCTTGC
ATGGATGAAACTAAAGAGATGGTTCGTCATGCAAAGGAGAATGGAGCAGA
TGCAGTGGCTTGTATTTCACCAAGTTTCCTCAAACCTATGAATGAAGAAT
ATTTATCAGATTACTTGGAAGAGGTGGCATCAGAAGCACCCAATACACCT
TTCATGTACTATCACCTCCCATCCTTCACTGGTGTCAAAGTGGACATGTC
AAAACTGATGTCATTATGTTATGAGAAGATTGAAACATTTGCAGGATTGA
AATGCTCTTCAGAAAATATGTACGAAATGATTGTTCCTCTTAAATTCAAA
CCCAAACCTCTCAAAGTATTCTATGGATTTGATTGGCAATTTCTCGGTGG
CCTTGCAATGGGTGCTGACTGTGCAGTTTGCACGAGCTTTAACTTCATTG
GTAATAAATTTGTAGAAATCACAAAAGCTTATAAAAATGGAAACATGAAA
GAAGCACAATCTATACAGcacAAAATTGCATTGGATTTTAATCCTTTCTG
TTCTAAATATCATGGTGTGGCATTTGCAAAAATCGCAACCACTTTGATTT
CTGGTATTGATATGGGTCAACCAAGACGCCCTTTGCATCAGTTCAGTGAA
AAGCAAATCAAAGAAATCAAAGCATTTCTAACGAAGGAAGGATACCTCAA
AAAATGAGTGGACTTCCAcaggaaaaatgaaattcatcGGCTTGGATTCA
TCATATGCGATAATTCAAGGACAAAATTTACAGTCGTCGTTTATTTACaa
tgaaaaactgttttttattacttttttagaATATAGTGATTTCTTAGATA
ATTTTGTAAGTATTTGATCTCTTAATAtttagaattgaaaaatcttattt
GAAATCAGTGTAACCACAAACTCAATACATATTCTTTAGCTGAAATAGAG
ACATAGAGACATAGTAAAAGACACTAGAATCGGGATTGGATGTGTGTTAC
TGGAAAAAGTCTGGGGCTACGAATTTTGAACTTTCTAGTTTTGGATGTAA
ATGATCAATTCAAACACCTCCTTCTCCcagacctggtaggatttttcaTC
CAGTGGgtttaaaaataacggactgaaactcg
Run BLAST on NCBI

transcript from alignment at sc0000104:579628..594673+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010278 ID=TCONS_00010278|Name=TCONS_00010278|organism=Clytia hemisphaerica|type=transcript|length=15046bp|location=Sequence derived from alignment at sc0000104:579628..594673+ (Clytia hemisphaerica)
CCAGAACGGTGAATTATGAGGCGATTGGAAAGTTTGTCGACCATTTGGTA CAAACTGGAGTTAACGGAGTGTTTGGTAAGAGCTTTGGTGTAAAAAACTA TACAACCCATCGTTTAGTGGGCATacaagcccgggggggggcttgcactt aggcaaaattaagtacggggacgtgctgctgatcagggtccctttttcag acTCTAGAGATATCTGATAGGGTCCCAagtttactaattttcaagatgtg gcCATTTCTGTGGTCAACCTTCCGACTTATCGAGCAATATTTCTAAAGTT TGATAAAGTTTAACCcttaaacgggggggggggattcACTAAGGTTTAAT CAAGGTTTTCCTTGTGTGagctaaaaaaaatctaaaatagactgggttct aataagaTTAATAACGAAAAAGGAGATGTTTCTTACCCAGACggtgtgac attcataacgtccaaataacgttatttgaacgttaaaacaacgttgtgtg ccagctgggtaggcTTCTGTGGCTCTACTACATACTGAATCATCCGTCCT TTCCACTATTTGCATTTTAGTATCTGGAACAACAGGTGAATTCACCAGTC TATCCATGAGCGAAcgaaaaatgattgctgaagcATGGCTCAAGTTTGGA AAAGATAAGTACGTTATTGCCCCGTTCTCCTGTCTGACTTTTAAgcacac ccctttctcacagacccactaggaaCCCATCTCattgaaaaattggccaa aatactgcccggtggaaaattatactcaaaattttccccactgaaaataa tcaaataaaacaatccTCAATgcaaatattatgctatttttcccatcccc actatattttctgacttaaaaacaatggaattcaaatccccagccaaaaa aaatatggaagtctcaatccccatcgagtttcagttcgttatAATTACCC CCACtagctgaaaaaatcccactgggtctgtgagaaggctCGGTATCAGT TAGAAAGGTTTATTAAANtttgtcttcagaggttactattttctttgaaa acttaacctctgatactcagggtaccaaTTCCCctttatgaaaattttct aCAAAAGTTTCGGAGGTATATTTGGACGATAAAACCATCATCAATtaaaa gctgataaaatttagcgttcaaaattttttataaagttcCAAATTTTTTA gctgcttgttttttttttattatctgaTTCCAGAACGGTGAATTATGAGG CGATTGGAAAGTTTGTCGACCATTTGGTGCAGACTGGAGTTAACGGAGTG TTTGGTAAGAGCTTTGGTGTAAAAAACTATACAACCCATCGTTTAGTGGG CATacaagcccgggggggggcttgcacttaggcaaaattaagtacgggga cgtgctgctgatcagggtccctttttcagacTCTAGAGATATCTGATAGG GTCCCAagtttactaattttcaagatgtggcCATTTCTGTGGTCAACCTT CCGACTTATCGAGCAATATTTCTAAAGTTTGATAAAGTTTAACCcttaaa cggggggggggggttcactAAGGTTTAATCAAGGTTTTCCTTGTGTGagc taaaaaaaatctaaaatagactgggttctaataagaTTAATAATGAAAAA GGAGATGTTTCTTACCCAGACggtgtgacattcataacgtccaaataacg ttatttgaacgttaaaacaacgttgtgtgccagctgggtaggcTTCTGTG GCTCTACTACATACTGAATCATCCGTCCTTTCCACTATTTGCATTTTAGT ATCTGGAACAACAGGTGAATTCACCAGTCTATCCATGAGCGAAcgaaaaa tgattgctgaagcATGGCTCAAGTTTGGAAAAGATAAGTACGTTATTGCC CCCTTCTCCTGTCTGACTTTTAAgcacacccctttctcacagacccacta ggaaCCCGTCTCattgaaaaattggccaaaatactgcccggtggaaaatt atactcaaaTTTTtcccccactgaaaataatcaaataaaacaatccTCAA Tgcaaatattatgctatttttcccatctccactatattttctgacttaaa aacaatggaattcaaatccccagccaaaaaaaatatggaagtctcaatcc ccatcgagtttcagagTTTTCCCTCATCCCGAAACAATTTTAATCACAGA CTCAGAATCGTCAGTAATCTAAGCGTTAACATGGACGATACATAGATTTT TATCCTTACTCTCAAAGGCTGACAAATTTCTTCCTTGTCAATAAGAAAga gatgtttttgatgtttttaaattaTATGTGAGTACATGAGAGTCTGAGCA AAGTGTATATTGTTTTacccacagatttataaagcccagaGGGCTAGATA TCGTGTTTTAAGCCATCGctggcaaaaaaagtgaatatcgcaagaaATAT AGTTTCTACTGTTTCTGAAAATCCTCGAAGCtcctgaaattctattgtaa ttttTAGGTTGGACATGATCATTATACAGTGCGGTTCATCTTGCATGGAT GAAACTAAAGAGATGGTAGGTCTTTTATCAAAAGCTTGAGGGATGTGCGT TATCCACCACTGAGCTTTATACTTTATACACCTTAGTACCGGCCAACCAA TACTTATCttttatttgagattttttgaaagtggtaacCTAATGGTAGCA ATAATCAATTGTGGTGTGTATGCAGCAAGAGCGctatatatctttttttt ggATACTTGTGATGTAGCCCCGTTGGATGTTATGAAAAGTTTTGACACTG CAACTGTTTCTTTACGGGtaatcaaagatggcgggtaAAGTGAAGGATTT TTCTTATTATCATCACCCAGGTTCGTCATGCAAAGGAGAATGGAGCAGAT GCAGTGGCTTGTATTTCACCAAGTTTCCTCAAACCTATGAATGAAGGTAA ATGGCGGCACTAGTTTATGCTTTATTATAGTCGACCACCCCCATCCTAGA TAAACCCCCttcgaaaaagttgaataaaGAGTTCGATATTTTATGGCATA ATGATTTTTTATgtgtaaaagagaaaaaaactaaatttgaaaTGGCTGAC GATTTGATAAAGTTGAAACTTCAAGTACTATCATATTTCAAACTGTTATT TTTTCTCGTACACGTTATGCAGCTCTGATCATCGAGCATAATTTGATAAA GTCTATCTGTTACTATCGCAAAAATGGTTTAGACTTGCCAAATATNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTTGGGACGATAAAACCATCATCAATtaaaagctgataa aatttagcgttcaaaattttttataaagttcCAAATTTTTTAGCTGCttg gtttttttttattatctgaTTCCAGAACGGTGAATTATGAGGCGATTGGA AAGTTTGTCGACCATTTGGTACAAACTGGAGTTAACGGAGTGTTTGGTAA GAGCTTTGGTGTAAAAAACTATACAACCCATCGTTTAGTGGGCATacaag cccgggggggggcttgcacttaggcaaaattaagtacggggacgtgctgc tgatcagggtccctttttcagacTCTAGAGATATCTGATAGGGTCCCAag tttactaattttcaagatgtggcCATTTCTGTGGTCAACCTTCCGACTTA TCGAGCAATATTTCTAAAGTTTGATAAAGTTTAACCcttaaacggggggg ggggattcACTAAGGTTTAATCAAGGTTTTCCTTGTGTGagctaaaaaaa atctaaaatagactgggttctaataagaTTAATAACGAAAAAGGAGATGT TTCTTACCCAGACggtgtgacattcataacgtccaaataacgttatttga acgttaaaacaacgttgtgtgccagctgggtaggcTTCTGTGGCTCTACT ACATACTGAATCATCCGTCCTTTCCACTATTTGCATTTTAGTATCTGGAA CAACAGGTGAATTCACCAGTCTATCCATGAGCGAAcgaaaaatgattgct gaagcATGGCTCAAGTTTGGAAAAGATAAGTACGTTATTGCCCCGTTCTC CTGTCTGACTTTTAAgcacacccctttctcacagacccactaggaaCCCA TCTCattgaaaaattggccaaaatactgcccggtggaaaattatactcaa aattttccccactgaaaataatcaaataaaacaatccTCAATgcaaatat tatgctatttttcccatccccactatattttctgacttaaaaacaatgga attcaaatccccagccaaaaaaaatatggaagtctcaatccccatcgagt ttcagttcgttatAATTACCCCCACtagctgaaaaaatcccactgggtct gtgagaaggctCGGTATCAGTTAGAAAGGTTTATTAAAAGAGTTTTCCCT CATCCCGAAACAATTTTAATCACAGACTCAGAATCGTCAGTAATCTAAGC GTTAACATGGACGATACATAGATTTTTATCCTTACTCTCAAAGGCTGACA AATTTCTTCCTTGTCAATAAGAAAGAGATGTTTCTGATGTTTTATGTGAG TACATGAGAGTCTGAGCAAAGTGTATATTGTTTTacccacagatttataa agcccaggACTAGATATCGTGTTTTAAGGCATCGctggcaaaaaaagtga atatcgcaagaTATATAGTTTCTACTGTTTCTGAAAATCCTCGAAGCtcc tgattggtcaagcgctgaaattctattgtaattttCAGGTTGGACATGAT CATTATACAGTGCGGTTCATCTTGCATGGATGAAACTAAAGAGATGGTAG GTCTTTTATCAAAAGCTTGAGGGATGTGCGTTATCCACCACTGAGCTTTA TACTTTATACACCTTAGTACCGGCTTTGGTACCGGCCAACCAATACTTAT CttttatttgagattttttgaaagtggtaacCTAATGGTAGCAATAATCA ATTGTGGTGTGTATGCAGCAAGAGCGctatatatcttttttttggATACT TGTGATGTAGCCCCGTTGGATGTTATGAAAAGTTTTGACACTGCAACTGT TTCTTTACGGGtaatcaaagatggcgggtaAAGTGAAGGATTTTTCTTAT TATCATCACCCAGGTTCGTCATGCAAAGGAGAATGGAGCAGATGCAGTGG CTTGTATTTCACCAAGTTTCCTCAAACCTATGAATGAAGGTAAATGGCGG CACTAGTTTATGCTTTATTATAGTCGACCACCCCCATCCTAGATAAACCC CCttcgaaaaagttgaataaaGAGTTCGATATTTTATGGCATAATGATTT TTTATgtgtaaaagagaaaaaaactaaatttgaaaTGGCTGACGATTTGA TAAAGTTGAAACTTCAAGTACTATCATATTTCAAACTGTTATTTTTTCTC GTACACGTTATGCAGCTCTGATCATCGAGCATAATTTGATAAAGTCTATC TGTTACTATCGCAAAAATGGTTTAGACTTGCCAAATATATAATGCTAGCT ACACTTATCATCGATTTTGAGAGCTATCTTCATTAGCTGACACCAAACGT AAACAAAAAATGATGTAGAAGTTCTCCAACGTATTTAACTTATTTGTTTT GTCACATAGAATATTTATCAGATTACTTGGAAGAGGTGGCATCAGAAGCA CCCAATACACCTTTCATGTACTATCACCTCCCATCCTTCACTGGTGTCAA AGGTGAGTGGTTCCTCTATTGCCCCATGTATCTAGTCTACAGCCTAGACT GGACAATGTCAGTTGATAAGCCTTCAAAGGCGAAACAAAAAGTATATAta ccattgagtttgaagctcCGAAGAAGCTagaaaggaatcttcaacctttc tcaaccagaaaaagtgaagccttcaAGATTTTCCCCGCATTTAGAAAACC ACCATACAAAAACCGCGAATTTAGCCTAGGATAAGGAAAATGGcatcatt tcccatccaggagttacGTAACTAACCCCTTTGGGGCTGTGGAAACAATG ATCTTTATACCTGTCAAGTAACTTCGAAATAAATGAGTTTTTGTTCAATA CTTGTagcaaagtcgatatttttGCATGATATAATCTGCCTAGCTCCCAG TTCAGCTTGTAGAAAGATAACATAGCACAAATTGAGGCCGGGATTGAGGC CAATGAATCAAGTTGTCTACCAACAgttattaaaaacaaaatttactgcA ATAATCCAGAAAATAACTTGCTCAAATTGGAATAGGAAAGCTTATCTTGA Tactttaatacaataatgaccggttagtgagggctgtactgagaaatatt gcccgaggtcaagtaacgaccgagcttgcgaggttgttgcgttgaccgag ggcaatattttcagtacagcccgaaaaaaaccggtcattattgtatttgt taacagtttccttcagcttcgattgatttttagcacttttaccaggaaaa atagcgaaataaagtgaaaaatacaagcgaaaagagatcaaaaattttta taatttctgacgtcagaaataaaaaatgagagaaatgatgtcaacgcatt gttcattttcctttgaaaaagtgacgtcacaatgaattttccNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNgacaatgtaggcccgtcgtcatgcgaaaagaaccaatt gcattgcgcaaaaagtcatgtagcccgcttcgaaaaagtaaccggttaac aattcTCCTTATTACTCTCAGGCGAAGCCAaactatttgtttttttctaa ttgTTAGACAATCGAGCATGACTTTTACTTAGCATTCAACGTGGaacctg tttttttttcagccatttttttcaaattgaaattgacaaaatcaaagaaa atgtcaaatagAATCCTTTCATCCCAAGGTCGTGAATAGACAGGGCGAAA ATCGGGCCGtttaaactagagctaagagatttatttttattttacctaaC TCGCTTTAGTGGACATGTCAAAACTGATGTCATTATGTTATGAGAAGATT GAAACATTTGCAGGATTGAAATGCTCTTCAGAAAATATGTACGAAATGAT TGTTCCTCTTAAATTCAAACCCAAACCTCTCAAAGTATTCTATGGATTTG ATTGGGTAAGAAACTATTTCATGTGAACATttcaattgttaaaaaaatat tttattgtcgTCACTCGTTCAATCGTCAAAGTCAGATTCGATTTCTTCAG GGGATTAAGGtggggtcaaaatgcttgcaacgttacatAAATCATTTCTA GAAGCTCATTTTGGACTCAaattgcgaattacgcaaaatttctaaatcaa aATACATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNctcacagcttgaaacgtcataacgacttataat tagcaattaagtggaagaatctgactctcacaggaaagttttaagtctct tttgagaattggatgagtgattttcgataagaaatgcaataaaaatggtt cgaaaaatcatttaatgagggaaggagagtgaacaataatatcattactg cggacatagctagaacataagaaatcggcaaaaatctggttacttgtata tccagtgtataataaatccttgatctaaccaaacgacgtttgatagcttg attttctttatgatgaaccatttagatgaacccatagtctgcagctgggt tagaaaattttctttttttcacccagccggtttccggaaacactacattt tcaTCTTACCCAAATATTTTCTCTTAATTCTTCATTTCAGCAATTTCTCG GTGGCCTTGCAATGGGTGCTGACTGTGCAGTTTGCACGTAAGTTGTATAT CTTCAGCACTTATTAActcagctgacacacaacgttcttttaatgtttat ctaacgttcacaacgtccacatGATGTTAGAtcaacgttgaaataacgtt atgtgccagctgggaagatTTTTACAATATGAGGGTTATGTATTGTCGAA AGTGTGAATTTAAGTTGATGAGTACTTATGGCCTGTCCTAGATACCTGGG GAGAGCACTAAATTCAAAAACGACCCGTACGTGCGGCCCGAATTTAAGTC TTTGAAATCGAATTCTTACAGTGCCGAcaaaatttaacaaattttgggta aatttgaGCGAAAAGTCGACCCCTTAcgatgcattttcttgaaagttttt gctcagattttccaaattttacacccttagactacactttttctcatctt cactCATTTCgatccttacagtgcactttggaaAGCTTGGAAAAGGACCC TTAAAGGCGATCGGTAGATCGTTTACCTAATGCCCCCACCCCGGGCCAAG ATACTCGAAGTTTTCAACTTTGTTAAAACATTGATTACGAGTTTGAAAAT TAACAGCTCTATTTAAGTTGCAGAAGAATATGCCCTTACAGTGTAGctct tgagcagtgaaaaggtatccttacagtgcattttaccgaacgtttctgaC GTTTCTGAAGCAACCTGAAANagtgaaaaggtacccttacagtgcatttt accgaacgtttctgaCGTTTCTGAAGCAACCGGAACATGAGCCTGAGATG TCAGACAACTTTCAAACAAATCAAGTTGTGTGCATGTCAAAACCATAAAG ATatatcagatttttactgtcagacgtgcaattcagcagtccccaaacac acccttaaAGTGTATCAagctaaaagaaaacttttgtagTGCATTCTATC AAAAGAACACCATTAGAGTGCATTTCGAGGATCTCGATAAGGGCGTGCAC ATGCCGtaggtcggaccatatgagtccCCCGGGCATGTAGAGTACAATGC TTGATTTGATCTTTCCTTCCTTAGGAGCTTTAACTTCATTGGTAATAAAT TTGTAGAAATCACAAAAGCTTATAAAAATGGAAACATGAAAGAAGCACAA TCTATACAGGTAATCTTTTCCTAACCCGAATTTCCATCCCAATTAGTTGG AAAATACACCCAGTCCCAGTAATAGGGAAATAGTTTAGGAGGtggggaaa atttgaaaatagtgGTTGGCCCAGGGCGGAGTAAGTAGTtgcggaggtgt ttacagtgtcCCAAACTCTACCACCACTTTTTTTTATCCGTAAACGGTCT GACCACAgtgttatttttttacttttaaacgaaagcgaaagcgactgaGT TCTGATGTTTACGTATATGATTTACGTTTTAATTTGGTGAGATTGTTATG CAAATCACCGCACTCAATACAATATTCATCCAAAATCTGAATAAAAAACG ATCAGATTGGCGTAGCAACCCAATAGCGTAGACAAGAagacgcaaaattt gtgtaggatagcagatttttatgacacagcaatcatctttttatattata aatagataattacagtgtcataaaattCTGCTTTCTTACACAAATTTTGA gaccctcctgtctacgctactgccaACCCGGGTAGATTCTTTTACGGAGG CATTATCTTTGGAGTGAATACGTGCCGTAAGCAGGGTATCAGAATCTGCT CTATTGCAAACAGTAGACTTCAAAATCCCCCTGAAAGCAAGCCAATCGCT TGTTTCTTTTCCTGCAGGTAAAACTCTACAACAGGTCTCAAAGACAATTG TTGGCCTTATCCCAGTTGATACAATCAAGAGTAGAAATACTTTAAAGGAC TTATGTTCACCAAATtcaatttaaaattcaaaatgttttatttttcagca cAAAATTGCATTGGATTTTAATCCTTTCTGTTCTAAATATCATGGTAaga tttgtcgttctttatgaaatttgtcgttctttttgtctttttttaagtAA GGCGAGAATAAATTATAACTCccttagtaaataatgactctCCAAAACCC TTTTTCTAAAGAGGTAGGGAGTTAAAAAACTAGTTGGATAAGACTCCCCT CCTCAAATGTCAAgcaaaagaagtcattgtattgcATTGCATTAACCCTA ACTAACCCTAACACACTGCATTCGCAAATCTGGGAAACAGAGTCTTTAGA ATTAAAGgtttaatttggaaattttgtagATATCCTAATTATTTGTTACT TTTGTACCTTTCTTTGTTGTTAATTTCCAACAATATTACAAAAGCTTGAC TATATTAACCTGATCAATATATTGTGCCCCTTTTTTCGATTCACTACCCT TTGTTGCCGAAGTCATCACAAATTTACATTGTAAGATTCCGAACTTCAGA CTTATACTGAAAATGGATCACTTCACCTTTCCCAACGTATGGTTTGTTAT TGTACATGGCGTTGTAAATTCACCATTTtattgtttatgatttttcatCG AATTTGCCCTTCAAACGAATGATTGAGAAATGTTTTCGAATACAACGAAC TGATATTGAATTAATACAAAAGCTTCTTTTGTGGCTTGTCCTAAAAAAAC TGGTAATagagaatgaaaaaaaacaaaaaaacagaaaacaattCTACTCT gtcaatttttaaatcaagcacATCTAGATGCTTACCCAAGGAACACGAGG AACCAACTTCATCCATCCAACATCTTTGAAAGTCTTCAGGCTGCCTTAGA TTTTTCTGNccccccccccccgggctgcaTTCGCAAATCTGGGAAACAGA GTCTTTAGAATTAAAGGTTTAATTTTGTAGATATCCTAATTATTTGTTAC TTTTGTACCTTTCTTTGTTGttaatttcaaacaatttttcaaaagcttaa cTACATAGATAGGGGGAGTCATTATAAACCAGGGGGAGTCTAAATTTGTT AGGAAATATTAGCTCTAGGGAGTCATAATTTActagtttataagaactgg GGAGTCATAATAAACTAGTGAATTTTTAACTGGGGAGTCACAATAATCTA GTTTATTATGACTGGGGGGTTATAATTTAGGGGAGTTGAAATTAACTGTG ACACCGGAATGCAGGTGAATGAAAAAAACTCTCATGCGGccggttggaaa attttttgttgatatttttgataacttaatcattgaaatagaactatAAA GATAACTGTTATGTACAAagaaacagtatgaagtaagccctgaatactaa tgcaTCAATAttactaacgaacaaaacttgatttacaagcaggaatatct aaccaaacgacgttgGATAGCTTCAACGGTCaacttcattttctttatga tgaaacatatagatgaacccatagtctgcgacCGGGTCaggaaatctttt tatttttgcctaatGCAGGATTTGTTACACAGACCCCCTCCaagaaaaag tgacgaaaattatttgtttttgttctAGGTGTGGCATTTGCAAAAATCGC AACCACTTTGATTTCTGGTATTGATATGGGTCAACCAAGACGCCCTTTGC ATCAGTTCAGTGAAAAGCAAATCAAAGAAATCAAAGCATTTCTAACGAAG GAAGGATACCTCAAAAAATGAGTGGACTTCCAcaggaaaaatgaaattca tcGGCTTGGATTCATCATATGCGATAATTCAAGGACAAAATTTACAGTCG TCGTTTATTTACaatgaaaaactgttttttattacttttttagaATATAG TGATTTCTTAGATAATTTTGTAAGTATTTGATCTCTTAATAtttagaatt gaaaaatcttatttGAAATCAGTGTAACCACAAACTCAATACATATTCTT TAGCTGAAATAGAGACATAGAGACATAGTAAAAGACACTAGAATCGGGAT TGGATGTGTGTTACTGGAAAAAGTCTGGGGCTACGAATTTTGAACTTTCT AGTTTTGGATGTAAATGATCAATTCAAACACCTCCTTCTCCcagacctgg taggatttttcaTCCAGTGGgtttaaaaataacggactgaaactcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005777XLOC_005777Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010278-exon-sc0000104-1491911889:579628..579702TCONS_00010278-exon-sc0000104-1491911889:579628..579702Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1510915933:579628..579702TCONS_00010278-exon-sc0000104-1510915933:579628..579702Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1575043694:579628..579702TCONS_00010278-exon-sc0000104-1575043694:579628..579702Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1491911889:585969..586056TCONS_00010278-exon-sc0000104-1491911889:585969..586056Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1510915933:585969..586056TCONS_00010278-exon-sc0000104-1510915933:585969..586056Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1575043694:585969..586056TCONS_00010278-exon-sc0000104-1575043694:585969..586056Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1491911889:586766..586823TCONS_00010278-exon-sc0000104-1491911889:586766..586823Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1510915933:586766..586823TCONS_00010278-exon-sc0000104-1510915933:586766..586823Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1575043694:586766..586823TCONS_00010278-exon-sc0000104-1575043694:586766..586823Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1491911889:587141..587216TCONS_00010278-exon-sc0000104-1491911889:587141..587216Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1510915933:587141..587216TCONS_00010278-exon-sc0000104-1510915933:587141..587216Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1575043694:587141..587216TCONS_00010278-exon-sc0000104-1575043694:587141..587216Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1491911889:587637..587729TCONS_00010278-exon-sc0000104-1491911889:587637..587729Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1510915933:587637..587729TCONS_00010278-exon-sc0000104-1510915933:587637..587729Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1575043694:587637..587729TCONS_00010278-exon-sc0000104-1575043694:587637..587729Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1491911889:589137..589282TCONS_00010278-exon-sc0000104-1491911889:589137..589282Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1510915933:589137..589282TCONS_00010278-exon-sc0000104-1510915933:589137..589282Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1575043694:589137..589282TCONS_00010278-exon-sc0000104-1575043694:589137..589282Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1491911889:590568..590614TCONS_00010278-exon-sc0000104-1491911889:590568..590614Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1510915933:590568..590614TCONS_00010278-exon-sc0000104-1510915933:590568..590614Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1575043694:590568..590614TCONS_00010278-exon-sc0000104-1575043694:590568..590614Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1491911889:591652..591736TCONS_00010278-exon-sc0000104-1491911889:591652..591736Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1510915933:591652..591736TCONS_00010278-exon-sc0000104-1510915933:591652..591736Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1575043694:591652..591736TCONS_00010278-exon-sc0000104-1575043694:591652..591736Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1491911889:592526..592571TCONS_00010278-exon-sc0000104-1491911889:592526..592571Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1510915933:592526..592571TCONS_00010278-exon-sc0000104-1510915933:592526..592571Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1575043694:592526..592571TCONS_00010278-exon-sc0000104-1575043694:592526..592571Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1491911889:594106..594673TCONS_00010278-exon-sc0000104-1491911889:594106..594673Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1510915933:594106..594673TCONS_00010278-exon-sc0000104-1510915933:594106..594673Clytia hemisphaericaexon
TCONS_00010278-exon-sc0000104-1575043694:594106..594673TCONS_00010278-exon-sc0000104-1575043694:594106..594673Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:579628..594673 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.198493 0 0.00443997 0.00238163 1.53114 2.51985 20.7262 15.5736 11.7914 17.0906 12.1879 9.29739 27.3315 30.9151 12.5471 11.8745 5.80812 4.14231 4.028 3.58444 5.00894 5.45711 1.62638 0.0110954 4.40339 5.13489 19.8631 15.0437
Blast
BLAST of TCONS_00010278 vs. Swiss-Prot (Human)
Match: NPL (N-acetylneuraminate lyase OS=Homo sapiens GN=NPL PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 2.164e-62
Identity = 108/267 (40.45%), Postives = 164/267 (61.42%), Query Frame = 3
Query:    9 VNYEAIGKFVDHLV-QTGVNGVFVSGTTGEFTSLSMSERKMIAEAWLKFGKDKLDMIIIQCGSSCMDETKEMVRHAKENGADAVACISPSFLKPMNEEYLSDYLEEVASEAPNTPFMYYHLPSFTGVKVDMSKLMSLCYEKIETFAGLKCSSENMYEMIX-XXXXXXXXXXXXYGFDWQFLGGLAMGADCAVCTSFNFIGNKFVEITKAYKNGNMKEAQSIQHKIALDFNPFCSKYHGVAFAKIATTLISGIDMGQPRRPLHQFSEK 803
            +N+  IG++VD+LV + GV  +FV+GTTGE  SLS+SER+ +AE W+  GKDKLD +II  G+  + E++E+ +HA E GAD +A I+P FLKP  ++ L ++L+EVA+ AP  PF YYH+P+ TGVK+   +L+    +KI TF GLK S  ++ +      + + +     +G D Q L  L MGA  AV +++N++G K  ++ +A++  +   A + Q  I    N       GV+  K   TL+SGI MG PR PL + S +
Sbjct:   25 INFSVIGQYVDYLVKEQGVKNIFVNGTTGEGLSLSVSERRQVAEEWVTKGKDKLDQVIIHVGALSLKESQELAQHAAEIGADGIAVIAPFFLKPWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDTDLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQKDFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASRE 291          
The following BLAST results are available for this feature:
BLAST of TCONS_00010278 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NPL2.164e-6240.45N-acetylneuraminate lyase OS=Homo sapiens GN=NPL P... [more]
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