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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010246 ID=TCONS_00010246|Name=TCONS_00010246|organism=Clytia hemisphaerica|type=transcript|length=1842bp
gaattttcgaaaacaaacaTGGCGGATAAAATCTGTGGAAAAACATGTGC
TCAACCTAACCTGTCAACCATGGTATGATTTTCTGTTTCAATGATAAGTT
AAAATGAGTACTCAAAGAGGAAATACTACAAAAAAGAGAGCACAAAAGCA
CAAAAACATCACAAAATTCATAAATGACAAATATGACACCACTGGAAAGA
TGAAGCAAATAAATCAATTGGTAGTTTCAAATGTGTGTCAGAGATGCAAA
GATTGTATTGAATGGAAAATCAAGTACAAGAAGTATAAGCCGTTGACTGT
TCCTGCCAAATGTAAAAAGTGTGATCTGAAGAAAGTCAAATATGCGTACC
ATATTGTTTGTTCAGAATGTGCAGTCAGTTTGAAAATCTGTGCAAAATGC
AGTATGGAAAAAGAAGTAGTAGGGGAAGTTGAAAAAAGTACATCTGAGAA
GCAAAGGGAGGAATCATTGTTGAGAGAAGAATTGAAATTTATGAGACTCC
GGGAGAAACGTACCCTTATGAGACAATTAGAGAAAGGGGAAAAGGTGAAG
GTGGACATGAATGAAAATAAggatgaagaagatgaagaagatgatgaaga
tgatgagAATGAAAGTGGAGAAGAAGATGAAATTGAACCAGAGgaataat
caatttttgatttcaatgtttttaagactttgaaccttttattaaaagta
ttttcaaattcaatttgcTGTACCATGtatcaatgaaatatttttaaggg
TAGACTTTATAGGGTTAAAAAATCAGAGCACTACCATTCCCAAATGacaa
attcatttttatttcatgatCATGAGTTTTGTTTCTTACAATTATGATGA
TTGCTTTTTTTGTTGAAcattaaaatgcttattttttgAGCCTCAGTATG
CTTATTAAAACATCATGCATATAAGAAGAGCCtatcaattttatttcaga
aaGCTAAGAATTGATTAATAATTAATTAATGTTGAATTTATAGCAGAAAT
TGACGTTcggttttgattttgataataaTTATTTCAAGATATATAAGTAC
ACAATTGATGCAGATTATATTGTTGATGGATATGCCAAGTAAGATGGGTT
TACAGGGTGTATAAGGTTTTCATTTTCGAAAAGAAGATTCGGAAAATCCG
AAAAAAAAACAGGCTGCGAAAATTTGTAAAGTGTTTCTTGATTGAATCCC
CCCTTTCTCCCCCACGTACGCTTTTGGACACTTTTCAAAGGACCCCCCTA
ctcatagctgtcaacttcacCTCACCAAAATGCAGGAGAGTTCCAAGTTG
GAAAATTCTCCTCTATAATccagtttttttttcaggaaatcatgGGCAAT
CTCTCCGGCAAAATCCGATTATATCGGAAATTTTTTTGGTCCGAAATCAA
ACAATTCTGgaagtttttcatcccaattttccaaaatcaggatatttttt
tcaaaaaaaatcagaaaatatttggaaattGGGAGATGCGGGATAAAATC
CTGATAATGCCAaagatttggctgaattttctTCATGCGGGAGAAATTGT
TGACATGCAACACTCTCCCGCTCAATGCaagagagttgacagctatgtcC
TTCTTCTCCCACTTCTTGAATGGTCccttataaaataaaagtataTTTTA
AATTATATCTTGGGTTACTAAGAGAGACaataattttatatatttttatg
tcAAAGTATTGTATTTAGTCCATTATTTAGTCCACTTCATAATTGATATC
TTGTCTTTAAATTTTTAGGTGTTGTCAAATTTAATTCCTTTTTTTGTTTC
CTGATTGAACTGGCGTCTCAACTACACCTAGGCTTAATCACA Run BLAST on NCBI protein sequence of TCONS_00010246-protein >TCONS_00010246-protein ID=TCONS_00010246-protein|Name=TCONS_00010246-protein|organism=Clytia hemisphaerica|type=polypeptide|length=181bp
MSTQRGNTTKKRAQKHKNITKFINDKYDTTGKMKQINQLVVSNVCQRCKD
CIEWKIKYKKYKPLTVPAKCKKCDLKKVKYAYHIVCSECAVSLKICAKCS
MEKEVVGEVEKSTSEKQREESLLREELKFMRLREKRTLMRQLEKGEKVKV
DMNENKDEEDEEDDEDDENESGEEDEIEPEE Run BLAST on NCBI transcript from alignment at sc0000104:29668..41496+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010246 ID=TCONS_00010246|Name=TCONS_00010246|organism=Clytia hemisphaerica|type=transcript|length=11829bp|location=Sequence derived from alignment at sc0000104:29668..41496+ (Clytia hemisphaerica)
gaattttcgaaaacaaacaTGGCGGATAAAATCTGTGGAAAAACATGTGC
TCAACCTAACCTGTCAACCATGGTATGATTTTCTGTTTCAATGGTAAGTT
TTTGATGCTCAAACTATTAAAGATGAGATAATTCGTTGATTGAGATAAAC
ATCTACCACTTACCTTGGCAGATTTcagtctctaaagaagggtgtcgaaa
ttagaagacagatgtcgagattagaccaacttttATACTTTTATCAACTT
ATGGTACATGGTAGtcagaaaatctgaaaatctctACTTTTTCCGCCATC
AGAATtagtaaaggcaaaaagtagttgagctccagctcctggactaGGTA
CATGCACATGGTGGCTGAGGCTgatggtttttagtagttttgaaagtctt
tagagcttgtgctTGTGGTTGTGatagagtttttatggtaagggGTCACT
CGCATATCGATTTTTCCTGCAACTAACGTCATTGTGACGCTATCTGAAGa
acccccccaccccccttTCTTAGCGTCATTTACATAATTAtaccaaaaat
cgatgaaagtaatttttcttctatATTATTACCTACAGATATTGATATTC
CAGCCACATTGATTATGTAGACGGTCCGTCAGCGCGGCCCTTGTATATAT
ATCAAAACACAGCCCATCTATTTTTTATTGCGGTATCTCTGTTTTTATGG
TTAGGGAGATCATAACATTTTCCTACAAACGTAACGGAAGGGTATTGGAT
ATCATCTCTGTTATATTTTATGCGTTTGAATTAAGATGGCAGGTGTAGCG
AAGGATGGAATACAAAATGTTACAGGTTTGAAAATCGATATTCTgttgaa
atttcttagcgtcataGGCTCtgacccccccaccccctcgcgtcacaatg
acgttagttgcaggaaacatcgatatgtgagtgacccctaatagtagggg
gaaatttgtaaaatcgctcaaattttttagtcaaagcacttgttatacct
ttttggaaagctaagggataggggaatcaaaataaNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttgattcccctaccc
cttagctttccaaaaatgtataacaagtgctttgactaaaaaaatcgagc
gacctcaaaaaaacgaacaaatttccccctactactaagttgattatgtg
tgtttgccagCAGTTAGGGGAACCATCCAGTGACTTCCAAAGAGTTAGCA
TTACTTGACTAGCATTACTTGACAATCCCATTGATTAGTCGGCTAGAGAA
CAAAAGTATGCTATTTAACAATTAGAactgtaaaaatgaaaaattttaat
caatttttccaggcggtgtcaaccgaaccctatctaACCGATTTTCGTTA
TCAAACCCATCGAACTTTATCgaaaaaaatcgaacgatagctgttcgatt
accgaaccagatcgaacagctatcgaactttacgaatatttcttgataag
ttctattTAGTTCGATGATTGTTGttctttgttcgatgaagttcgattga
tgttcgatgagttcgatTTAAGTTTGATGTGGTTCGATGAAAGTACGATG
TGGTTCGATGATTGTGtcggattgattctacttttctttacctttcagaa
aataacgaggttgtttaatcaaaacgCAGGCACCGTATGCTTCACTCATT
ATTGCTCATTTGAAATAAAAGAGATgacactttctttaaagaaagtaata
aaaattgaaatcttttttttcacaaattaacgaccaaccaaTAATCTTac
aagagcttgtaaaagctccagcttgtcccatccgaTGGGATAGATTTAGG
ATGGCCTGCGAGAATGGCCTGTGGGCAGCCGTCAATACGCCCttggaata
taaataaaaaattggcggcaaggtataaattgatttaatcgaaccaatcg
aacttcatcgatcttaatcgaactgatcgaacctcaATCGGATTCATCGA
GCTGAGATAGAACTATAATCCTATAATCGAACAGTCATTGAACTTTACGA
AAGTTTTCCCGGTTCGATAGGTGTTCGAACAATTATCGTTCTATagggtt
cgattaagtttgattggttcgataatcgaacagttTGATTGACATCGCCT
GGATTTTTCAAATAAGTCTCAACTTAAAAAAAGGAAAGGTTCTCAAAGTT
GATGAAGTACAGGTAAGGACATAAGAGTTAGCTGTGTAGGAGATTATCGG
CTCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTGGAGAGATTTTGTTAATAGTTTGGTGTACAAGTTTGATGTT
ACACTTGAACACAGTTTGAGCGATTGTAGGTATACCAGTGTTTTCAAAGA
GTTGAGAGGTTTCAACGTCAAAGTTAGAAAAAGTGAGGATGCGAAGACAT
CGTTTTTGGAGTCGGCCAATTCTTGAGTTTTGAGTCAATCATTGGCCCCA
GACAATGTTTTCGTATGACATACCGttagagtgggtaacttgcatcagtg
gtgcctaacatgcatagccctcaaatgaatgactcgtctggtcattaaaa
tacaaagttaaatcaaaacaaaaatggtagagtagagctgtgaGCAGAGC
TGAATATAgcttattttaatgaccagccaggtcattcattttagggctat
gcctgttagcctccactgatgcaagttacccactctaaCGGTATGTGAAT
GACATAAATGACAGAAACAGGAACAAAATAACTTTAGCAAAAAGCTTAGC
AAGTATACCACTCGACTGCGGTtgagcaatgatgatgatgatgataccAT
TTGCCCTGCCAAGTTTTTTTCCTAGATGGTCAAAATGAGAGTTCCAGGTT
AGAAATTCATCGAGAAATAGCCCAAGGTATTTTACGCAAGTTGAGAGTTT
AAGTTCGAAGTCATCGAGCTTTAACTTCATTGAATAGGGAATGGGCTTAT
GTCTGCTACGGAAGATCAACACTTCTATTTTCAATACATTGAGTGAGATT
TTATTTGCTCGGGGCCAAGAGGTGAGTCGTGCAAGGTCAGATTTGACTTT
GGTTTCTAGAGACTGAAGGTCAGAATCAGAGGAGAGGAGACAggtatcat
cagcaaaaagATGCCTTTGACTATTTTGAAGAACATAATGAAGacatagt
gtccttcagggtctcttcccccccccatgcctagaatgaaaattttccat
tcccccccCCTCATTTTTCCCCACCCCTGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCCCCCCCCcctcgcccccccccccggcttcaaaa
aaaattctttcccccctatacgtccttttgacctcaaaacccatcccccc
ctgaatccaggggggaggacactatggaaGATAATTGATATAGATGAGAA
AGAGAATAGGTCCAAGGACAGATCCTTGAGGAACTCTGTGATTAACAGGG
CGTTTAAAAAAGTCCATGCCAGAAACAGAGACGTATGGTTGTCGGTCTGT
AAGATATGAACGAAACCATTGATTAGAAAAGCCCCGCGCACCATAATGTT
TAAGTTTAGACAGTAGTATTTCATGGTCGACCGTGTCAAAAGCTTTTTGC
AAGTCGATGAATACCCCGCAAGAGTAAAGTTCTTTGTCTATATTAAATCT
TATCATTTCCGTTAGGTTTATCAAAGCGTGAGTTGTAGAATAATTACTTC
TGAAACCaaattgacttttgaaaatagtgtTATTGTCATCAAGAAAAGAG
ACTAAtctaaattttattattttttcgaataTCCATGTTTGATAGTAGAG
ATATTGGGCGATAATTATGAACATTATGAGCGGAGCCCTTATGTTTAAAA
ATTGGAATTACTTTAGCCGTCTTAAAGTTTTCGTCAGCATTGTTGTTTAT
AGTTTCACAAATTTTATCGGCGATTGTTGAGAAATGTTTATTAAATTCTT
CGCTTGTAGCAGCGGGATCAGATGTTAGTTGACCATTAATGTTAAGAGTT
ATGTCTGTGTGTCcacttttgtgtttttttgttttcattagcTCGCTTAT
ACCTTTCCAgatatttttactgtttttaatgTTAGAGTTGaagtaatttt
tgaaataatttatctTGCTCTTTCTTGTTAATTTACCAATTTGGTTCCTg
taatatttttacttattattggacctaccgttcgtccgtctgttaccagc
ttttctcaggattggctcattagttttttctaatttttggcacaatgatg
caaaatggcaatgcccgaAATGTGACGCTGAAAAACTggctttttggcat
tttctcgagattttatcattagttttttctgattttttgctcaaagatgc
gtattaacaatgcccaaaacatggccgagtctgaccttcaagaacaattt
ttttctggcttaaaatgccggaaatcgccgtttttctggattttcattgg
actttttccttataattggttgttatttcattcaaaaacattattaatag
caatgcccaccatcaagcatttctcgagatttcatcattagttttttctg
atttttttgcacaaagatgcgtaatagcaatgcccaaaacatggccgagt
tcgatttttgagaaaattttttttccagccgaaaatgccagaaatatacc
ggaaatcgccgtttttgcagattttcattggactttttccatatatttct
ttgtttgttcacttaaaaaagttattgataataatgccaccatcaagcat
gattcaatcgtcaataaaacttttgtaattttgcaaccttaactttatat
ttcttttttcccaaaCCCCTCCcccaatcaacaatcaatgatgaaattta
atgcattttcgctaaccgctatattttcttaatgattgtttttctcctta
ttgctatctaagtttcatcatcaggtaggtccattcagcatgttgcttgt
taagtTCAGTTTTAGCTGCTTGGTCCTCTGCTTTGCTTAAAGATGCTAGG
AAGCCATCACGCTTATTTATAGAAATCTTTAAACCTTTAGTTATCCACGG
TTTACTACCTTTCTTTATTTGTTTATTAGAAAGTTTAGTTAAAGGTGCAT
GTATATCTATTAGAGTATTCATCTccttgaaaaaagtttaaaacaacAAG
TCGGGTTCATTGGCATACGACCGCAGCATGTCATTCCAATTCACCTTGTG
GAAATATTTCCATTTCCTATAGTATTTGACTATATGCCATTTGccagttt
gaaaattttcaaagattaaaTATTGAGGAAGATGATCAGATATGCGGAAT
GAAGAAGTTTTCGATGAAGGTTTCAATTTTCATAGGTGGGTGCTATAGAT
ACAACCTACAATGACATTCTTCTGTTTCTCAAACATAACCTCGCAGAAAG
TCCATTCAAGCTCTTTATCCGAATAGAGTATACTAGAGTATACTTTCTTT
TCTAGGTTTAAACTTTATGTCGTTTGAAATATAGAGTGCCGTGCCCCCAG
CACTAGCCTTAGTGTTGGAGAATAGAGATTTATAACCGTCGATTTCAAGG
TTATGCGGAGGGGAAGTTTCTGTAAGCCTAGTTTCGGAGATTCCTAAAAC
TTTGAACTTGTGGTTGATTGCGTTTAAAAGATTATTGTATAGATCAAAAT
GTTTCGGCAGAGAGGAAATATTAAGATTTAAGAAGGAGAGGTGCGAAGGA
GACTTTGCGAAAGTAGCGTTAAAATCATTGACGTCAAGATATCTATACTC
AAAAGAGTTAAAAGAGAGTTCTGTGTTAGCATTTTGGATTTGATTAATCT
CTGGAAGATCTGAAAAGAACGGGTGGAAATAGTTGAACCTGAAGTCCTTC
TCGTCCAGTTGTTCGTAGCACATGCTAAATGGGAAGAGACTGCAATTGCA
GTTAATGCAAGACCCAATTTGAGTGTCTGGATTTGTTAGAGAGAGATTAC
ACTCATTATGAAACCAGTTCTGACAAAACTGACAAAAGAACGTTGGACCT
CCTAAACTTACTAACTCATCACACGCCGGACAAGTTGCGTTCATCAtaga
aaatcttaattttaaaactatttttcagAGTATTATCAAAAGTGTATTAC
TAAGGTTTGAACAAAAGTATTACGTCGTTTTTCAAGGGGAGTCTTCCAAA
CTCAAACTTGGCACAGAAAACATTGAGTGGTCATTAAGGGGGTGGGGTGT
AGGTTGTGGAGGTTTTTTTATTAGTGGctatgaaactttttttgaaactg
ATAGTAATCTTGAGTAATTTAACATTAAAAGAGGACATCATAACTTATTT
CTGGGACACTTGGTTTATCATTTGGGATATCACCAAAAGTATTTCAAGTA
GACAAGACAAAATGGACAAAACATCACTTGGTTATGAACTGAGAAAAACT
CCTGAAAAGGGTGAAGGTATCTTTgccacaaaatatttttgtaaaggACC
TCTTGTTATGGAGGGAAAAGTGCTGAAAGAAATGCCTCATAATACAAGCC
ATACAACTCAAGTAGGGGTTAACAGATGGATATTAAGAGAAGAACTTGCA
CAAAAAGTCAATCATTCATGTGATCCTAATGTGGGTTACAGAGACAATTC
AGTTGGTGGAATGGActattttgctttcaaagatATTCATCCTGGTGATG
AAATAGTTGGAGATTATGCAATGGGAAACTACAAAGTCGATCATATGCCA
CCATGCAAGTGTAGCGCTCTTCAATGCAGAGGGGTAATAACTGGCTGGAA
GGATTTACCTCAGGACATAAAAACATTATACAAAGGATATCACGCACAAT
ATTTACTTGAAATAGATGGAGATGCTGGCAATTGATTGTCCTATTCCATT
AAACCTACACTCATGGATAACTACCGTTCTATCTGTGTTgcattcattac
tttttttaataatacatcaaaataaaacattactTGTAATTACATTACAT
CACCTACCATATTTCACATATAAATTCAGGCCTTCAGACGATGAGTACGT
CATATACATGCATATACctgtgatttaaaaaaatcttattcaTTAGAATT
ATACTTTCATAGTTccatttttctgaaaatataaaacaacaaacaatttt
ttttagtaGAATTTTAGTGTTAATTTTGCTTTAggaatttgattttaaat
aatcttttttatattttgtatatctaattttttttacagataTTCCACAC
ATCATAATATTTATGAAAAGTATTAGCTATGACAGAAACACATCCACATC
AGTTTTTACTGCCAATACATATACTTACTTAGTTGTAGATAGAACTAGTC
AAACAAGTGTTCAAACTGTCTGGATAAGACAAAATCACGATACTGCATAA
TATACTATAGAATAGATTAAAATACCTATTTATTGAAAACAatgcaaaaa
tatattttactgCCAGATCTGACAAAAAAGCTTTCATTCATGAAAATACC
ATCAAAGTTCTGCATAGGTCTgggtttgaatgttttgttttgtcagTTAA
TAAAATTCTCAACTATTGCTTTTTCAGATCCAAAATCAATATATTGATCA
CGTTTCCCAActgttttctctctcttttaGATAAGTTAAAATGAGTACTC
AAAGAGGAAATACTACAAAAAAGAGAGCACAAAAGCACAAAAACATCACA
AAATTCATAAATGACAAATATGACACCACTGGAAAGATGAAGCAAATAAA
TCAATTGGTAGTTTCAAATGTGTGTCAGAGATGCAAAGATTGTATTGAAT
GGAAAATCAAGTACAAGAAGTATAAGCCGTTGACTGTTCCTGCCAAATGT
AAAAAGTGTGATCTGAAGAAAGTCAAATATGCGTACCATATTGTTTGTTC
AGAATGTGCAGTCAGTTTGAAAATCTGTGCAAAATGCAGTATGGAAAAAG
AAGTAGTAGGGGAAGTTGAAAAAAGTACATCTGAGAAGCAAAGGGAGGAA
TCATTGTTGAGAGAAGAATTGAAATTTATGAGACTCCGGGAGAAACGTAC
CCTTATGAGACAATTAGAGAAAGGGGAAAAGGTGAAGGTGGACATGAATG
AAAATAAggatgaagaagatgaagaagatgatgaagatgatgagAATGAA
AGTGGAGAAGAAGATGAAATTGAACCAGAGgaataatcaatttttgattt
caatgtttttaagactttgaaccttttattaaaagtattttcaaattcaa
tttgcTGTACCATGtatcaatgaaatatttttaagggTAGACTTTATAGG
GTTAAAAAATCAGAGCACTACCATTCCCAAATGacaaattcatttttatt
tcatgatCATGAGTTTTGTTTCTTACAATTATGATGATTGCTTTTTTTGT
TGAAcattaaaatgcttattttttgAGCCTCAGTATGCTTATTAAAACAT
CATGCATATAAGAAGAGCCtatcaattttatttcagaaaGCTAAGAATTG
ATTAATAATTAATTAATGTTGAATTTATAGCAGAAATTGACGTTcggttt
tgattttgataataaTTATTTCAAGATATATAAGTACACAATTGATGCAG
ATTATATTGTTGATGGATATGCCAAGTAAGATGGGTTTACAGGGTGTATA
AGGTTTTCATTTTCGAAAAGAAGATTCGGAAAATCCGAAAAAAAAACAGG
CTGCGAAAATTTGTAAAGTGTTTCTTGATTGAATCCCCCCTTTCTCCCCC
ACGTACGCTTTTGGACACTTTTCAAAGGACCCCCCTActcatagctgtca
acttcacCTCACCAAAATGCAGGAGAGTTCCAAGTTGGAAAATTCTCCTC
TATAATccagtttttttttcaggaaatcatgGGCAATCTCTCCGGCAAAA
TCCGATTATATCGGAAATTTTTTTGGTCCGAAATCAAACAATTCTGgaag
tttttcatcccaattttccaaaatcaggatatttttttcaaaaaaaatca
gaaaatatttggaaattGGGAGATGCGGGATAAAATCCTGATAATGCCAa
agatttggctgaattttctTCATGCGGGAGAAATTGTTGACATGCAACAC
TCTCCCGCTCAATGCaagagagttgacagctatgtcCTTCTTCTCCCACT
TCTTGAATGGTCccttataaaataaaagtataTTTTAAATTATATCTTGG
GTTACTAAGAGAGACaataattttatatatttttatgtcAAAGTATTGTA
TTTAGTCCATTATTTAGTCCACTTCATAATTGATATCTTGTCTTTAAATT
TTTAGGTGTTGTCAAATTTAATTCCTTTTTTTGTTTCCTGATTGAACTGG
CGTCTCAACTACACCTAGGCTTAATCACA Coding sequence (CDS) from alignment at sc0000104:29668..41496+ >TCONS_00010246 ID=TCONS_00010246|Name=TCONS_00010246|organism=Clytia hemisphaerica|type=CDS|length=546bp|location=Sequence derived from alignment at sc0000104:29668..41496+ (Clytia hemisphaerica)
ATGAGTACTCAAAGAGGAAATACTACAAAAAAGAGAGCACAAAAGCACAA
AAACATCACAAAATTCATAAATGACAAATATGACACCACTGGAAAGATGA
AGCAAATAAATCAATTGGTAGTTTCAAATGTGTGTCAGAGATGCAAAGAT
TGTATTGAATGGAAAATCAAGTACAAGAAGTATAAGCCGTTGACTGTTCC
TGCCAAATGTAAAAAGTGTGATCTGAAGAAAGTCAAATATGCGTACCATA
TTGTTTGTTCAGAATGTGCAGTCAGTTTGAAAATCTGTGCAAAATGCAGT
ATGGAAAAAGAAGTAGTAGGGGAAGTTGAAAAAAGTACATCTGAGAAGCA
AAGGGAGGAATCATTGTTGAGAGAAGAATTGAAATTTATGAGACTCCGGG
AGAAACGTACCCTTATGAGACAATTAGAGAAAGGGGAAAAGGTGAAGGTG
GACATGAATGAAAATAAggatgaagaagatgaagaagatgatgaagatga
tgagAATGAAAGTGGAGAAGAAGATGAAATTGAACCAGAGgaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010246-exon-sc0000104-1491911889:29668..29760 | TCONS_00010246-exon-sc0000104-1491911889:29668..29760 | Clytia hemisphaerica | exon |
| TCONS_00010246-exon-sc0000104-1510915933:29668..29760 | TCONS_00010246-exon-sc0000104-1510915933:29668..29760 | Clytia hemisphaerica | exon |
| TCONS_00010246-exon-sc0000104-1575043694:29668..29760 | TCONS_00010246-exon-sc0000104-1575043694:29668..29760 | Clytia hemisphaerica | exon |
| TCONS_00010246-exon-sc0000104-1491911889:39748..41496 | TCONS_00010246-exon-sc0000104-1491911889:39748..41496 | Clytia hemisphaerica | exon |
| TCONS_00010246-exon-sc0000104-1510915933:39748..41496 | TCONS_00010246-exon-sc0000104-1510915933:39748..41496 | Clytia hemisphaerica | exon |
| TCONS_00010246-exon-sc0000104-1575043694:39748..41496 | TCONS_00010246-exon-sc0000104-1575043694:39748..41496 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104 | supercontig | sc0000104:29668..41496 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR019351 | DUF2039 |
Blast
BLAST of TCONS_00010246 vs. Swiss-Prot (Human)
Match: CI085 (Uncharacterized protein C9orf85 OS=Homo sapiens GN=C9orf85 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.451e-25 Identity = 53/106 (50.00%), Postives = 75/106 (70.75%), Query Frame = 2
Query: 104 MSTQRGNTTKKRAQKHKNITKFINDKYDTTGKMKQINQLVVSNVCQRCKDCIEWKIKYKKYKPLTVPAXXXXXXXXXXXYAYHIVCSECAVSLKICAKCSMEKEVV 421
MS+Q+GN + R QKH+N F NDK+D + + K+IN + VCQRCK+ +EW++KY KYKPL+ P KC KC K VK +YHI+C CA L++CAKC ++++V
Sbjct: 1 MSSQKGNVARSRPQKHQNTFSFKNDKFDKSVQTKKINAKLHDGVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKKEDIV 106
The following BLAST results are available for this feature:
|
