TCONS_00010216 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010216
Unique NameTCONS_00010216
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length146

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010216 ID=TCONS_00010216|Name=TCONS_00010216|organism=Clytia hemisphaerica|type=transcript|length=146bp
ttttagcacaaaaaagaaaacaaataaaagcaAATATGAATCCATGTTGA
AGTAGAAAACAATGCTTTTCATTATGCACAAGTTTTGTTGACTTGTTGAA
AATGTTTGGCTTGATTGAGTGGCTTTCTCTCTGACATTGCAAACAG
Run BLAST on NCBI

transcript from alignment at sc0000103:103967..104112

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010216 ID=TCONS_00010216|Name=TCONS_00010216|organism=Clytia hemisphaerica|type=transcript|length=146bp|location=Sequence derived from alignment at sc0000103:103967..104112 (Clytia hemisphaerica)
CTGTTTGCAATGTCAGAGAGAAAGCCACTCAATCAAGCCAAACATTTTCA
ACAAGTCAACAAAACTTGTGCATAATGAAAAGCATTGTTTTCTACTTCAA
CATGGATTCATATTtgcttttatttgttttcttttttgtgctaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005734XLOC_005734Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010216-exon-sc0000103-1491911889:103967..104112TCONS_00010216-exon-sc0000103-1491911889:103967..104112Clytia hemisphaericaexon
TCONS_00010216-exon-sc0000103-1510915933:103967..104112TCONS_00010216-exon-sc0000103-1510915933:103967..104112Clytia hemisphaericaexon
TCONS_00010216-exon-sc0000103-1575043694:103967..104112TCONS_00010216-exon-sc0000103-1575043694:103967..104112Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103supercontigsc0000103:103967..104112 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010216 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top