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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010198 ID=TCONS_00010198|Name=TCONS_00010198|organism=Clytia hemisphaerica|type=transcript|length=1354bp
TTAGAAACTGACCGTTTGAGTTTGGTGAGGATCAAAGGAGAAACTCACGG
TGAAGAACTCAATCGAGTGGTTTGCGATACTTTTGAATCATTGGAACCAT
GGGTACCCTGGGCTTTCAAAATTCCAACGGTCGAGGTATGATNATTGGAA
CCATGGGTACCCTGGGCTTTCAAAATTCCAACGGTTGAGGATACTATCAA
TGGACTTCGCTTGACCACTGACAACCACAACAATTACATCTTCAATATTT
ATCTTCGTGAAAATGACCACGAACTCATCGGAAACGCTAAATGTGTGACC
ATAGATAAAGAAAATTGTTATGAATTAGGGTACTGGTTACACCAGAAGCA
TTGCGGCAAAGGATTTACGACAGAGTGTGTACAGAGGCTTATCAAATTCG
CTCGAAATGAACTGAAAGCATCGGCAGCTGTTATGATTATTAACGAGAAC
AACAAAGCAAGTTTACGAATCGCTGACAAAACTGGTTTTCAATTTGTACG
AAAAATTCTGGAAGATTCTTACGCGTTGAGACCGGAATGGAAAGATCGAA
TGAACCACTATGTACAGGTGCTTTTGTGAACAGTCGAATGAACTGCTATG
TACAGGTGCTTTGTGAACAGTCGAATGAACTGCTATGTATAGTTGCTTTT
GTGAACAGTCGAATGAACCGCTATGTACAGGTGCTTTGTGAACAGTCGAA
TGAACTGCTATGTATAGTTGCTTTTGTGAACAGTCGAATGAACCGCTATG
TACAGGTGCTTTGTGAACAGTCGAATGAACTGCTATGTATAGTTGCTTTT
GTGAACAGTCGAATGAACCGCTATGTACAGGTGCTTTGTGAACAGTCGAA
TGAACTGCTATGTATAGTTGCTTTTGTGAACAGTCGAATGAACCGCTATG
TACAGGTGCTTTTGTGAACAGTCGAATGAACCGCTATGTACAGGTGCTTT
GTGAACAGTCGAATGAACTGCTATGTATAGGTGCTTTTGTGAACAGTCGA
ATGAACCTCTATGTACAGGTGCTTTTGTGAACAGTCGAATGAACTGCTAT
TACAGGTGCTTTGTGAACAGTGGAATGAACCGCTATGTACAGGTGCTTCT
ATGAACAGTCGAATGAACCGATACGATGCTGTTGGTTATTGTATAATGGT
TCAACTGTAATCTACATTATGTATGACACAACCATGTTGATTTCGAAATT
GTGGGAAGCTTTGGGAAAAAAGCCCACATAAAGTagatttaattcaaaaa
tcatttctgATTACCTCAACACGAACGTGAAAGCAATGAACTTCATTTCG
TATTCGGTGAATTTGAGTGGATGATTATACTTTATGGGGACTTTTCGTTT
TTTG Run BLAST on NCBI transcript from alignment at sc0000103:196479..199009- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010198 ID=TCONS_00010198|Name=TCONS_00010198|organism=Clytia hemisphaerica|type=transcript|length=2531bp|location=Sequence derived from alignment at sc0000103:196479..199009- (Clytia hemisphaerica)
TTAGAAACTGACCGTTTGAGTTTGGTGAGGATCAAAGGAGAAACTCACGG
TGAAGAACTCAATCGAGTGGTTTGCGATACTTTTGAATCATTGGAACCAT
GGGTACCCTGGGCTTTCAAAATTCCAACGGTCGAGGTATGATNATTGGAA
CCATGGGTACCCTGGGCTTTCAAAATTCCAACGGTTGAGGTATGATCATT
TTTCAGTTTACGTGATAGTAAAGACCGGTATCCACTTTCGCGCCAAATGG
GCGACACCTTTTTTGCCTGAAGAAAAGATTACGTCATAAAAAAGTTTCGC
GTGAACAAAAAAAAAGTTAAAGGGAGTTCAGCTTTTTTCAACAGTTACGT
CAATTTTGACCAATGGGATTGTTTCATTTTTCAACCGATCAATGAATGAC
CTTACAAAAACGTTAAAAAAATTTTCGCTCATTTCGCGTGAAAGTGGAGA
CCGGCCTTAAGGCCATTGTATGATAAACGGTTTCAATTCTTTTGGTTTTT
ACAAACAATTAAACTTTACAATTTTTCACCATAATGGTACACTTTCCCTT
GCACACCCAGAGTGCTCTGTTCTGTCAAGCAAGTCATCCACTTCGGAGAG
TTGTCAAGGGATCGCTTTGGATCGGAATATTTTGGAAAACCGATCTGAAC
AGTTTTGCAATAATATCCACTTCAAATTTTCTGAATCAGATTCTTTCTGT
TTACAATATTCATACAAAGAAAATTAAATTAATTTAATCTTCTACAGTTG
TCCCATTGTTTGAAATCAATAGAACCGTTTCAATCCGACACGGATCGCAA
AAAAAGTTGAAAAAATCCAACTTTTTTTCTATCCGTTTTAACCAAAACAC
GTGAACATTCGAACCGTTTACGTGAAACGAATATGTGCAAATGGGTTGAA
GATAATCCCAAGAACTATAGAAGCCGTGAAAAATTATCCGGAGTGGATAA
CCCGCTTTACAATTAGCCCTGTATATCGTTAAGCTTGGTACTCACTAGTT
GAAAAAAAGTGGCGCTCTAAAACTAAAACCACAAAGCAACAAAAAGCCAC
ACAAATTATAGTGAGTACACACATTAGTCGCACAAGTCTAGTAAAAAAAT
CTTGTTTAACAATGCGGTGTCTTTGAACCCTGCATCTAACATTACGCGTG
CGACTAAACATCAGGCGCGTGCGACTAGTGTTAAACGTCACTTTTTTTCA
ATACGTGAGTACCAAGCTTAACAAATTACTCTGTAAAATCATTTGTTGCT
GTATCCAGGATGGTACTCTGTTGAGGACCGAAACGTCTACACAAAATTAA
TTAAAATGAACAAGAAGCTTGTGTTTATGAGAGGATCGAATTGTTCAACA
AATTATTTTCTCTCAGGATACTATCAATGGACTTCGCTTGACCACTGACA
ACCACAACAATTACATCTTCAATATTTATCTTCGTGAAAATGACCACGAA
CTCATCGGAAACGCTAAATGTGTGACCATAGATAAAGAAAATTGTTATGA
ATTAGGGTACTGGTTACACCAGAAGCATTGCGGCAAAGGATTTACGACAG
AGTGTGTACAGAGGCTTATCAAATTCGCTCGAAATGAACTGAAAGCATCG
GCAGCTGTTATGATTATTAACGAGAACAACAAAGCAAGTTTACGAATCGC
TGACAAAACTGGTTTTCAATTTGTACGAAAAATTCTGGAAGATTCTTACG
CGTTGAGACCGGAATGGAAAGATCGAATGAACCACTATGTACAGGTGCTT
TTGTGAACAGTCGAATGAACTGCTATGTACAGGTGCTTTGTGAACAGTCG
AATGAACTGCTATGTATAGTTGCTTTTGTGAACAGTCGAATGAACCGCTA
TGTACAGGTGCTTTGTGAACAGTCGAATGAACTGCTATGTATAGTTGCTT
TTGTGAACAGTCGAATGAACCGCTATGTACAGGTGCTTTGTGAACAGTCG
AATGAACTGCTATGTATAGTTGCTTTTGTGAACAGTCGAATGAACCGCTA
TGTACAGGTGCTTTGTGAACAGTCGAATGAACTGCTATGTATAGTTGCTT
TTGTGAACAGTCGAATGAACCGCTATGTACAGGTGCTTTTGTGAACAGTC
GAATGAACCGCTATGTACAGGTGCTTTGTGAACAGTCGAATGAACTGCTA
TGTATAGGTGCTTTTGTGAACAGTCGAATGAACCTCTATGTACAGGTGCT
TTTGTGAACAGTCGAATGAACTGCTATTACAGGTGCTTTGTGAACAGTGG
AATGAACCGCTATGTACAGGTGCTTCTATGAACAGTCGAATGAACCGATA
CGATGCTGTTGGTTATTGTATAATGGTTCAACTGTAATCTACATTATGTA
TGACACAACCATGTTGATTTCGAAATTGTGGGAAGCTTTGGGAAAAAAGC
CCACATAAAGTAGATTTAATTCAAAAATCATTTCTGATTACCTCAACACG
AACGTGAAAGCAATGAACTTCATTTCGTATTCGGTGAATTTGAGTGGATG
ATTATACTTTATGGGGACTTTTCGTTTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010198-exon-sc0000103-1575043694:198821..199009 | TCONS_00010198-exon-sc0000103-1575043694:198821..199009 | Clytia hemisphaerica | exon |
| TCONS_00010198-exon-sc0000103-1575043694:196479..197643 | TCONS_00010198-exon-sc0000103-1575043694:196479..197643 | Clytia hemisphaerica | exon |
| TCONS_00010198-exon-sc0000103-1510915933:198821..199009 | TCONS_00010198-exon-sc0000103-1510915933:198821..199009 | Clytia hemisphaerica | exon |
| TCONS_00010198-exon-sc0000103-1510915933:196479..197643 | TCONS_00010198-exon-sc0000103-1510915933:196479..197643 | Clytia hemisphaerica | exon |
| TCONS_00010198-exon-sc0000103-1491911889:198821..199009 | TCONS_00010198-exon-sc0000103-1491911889:198821..199009 | Clytia hemisphaerica | exon |
| TCONS_00010198-exon-sc0000103-1491911889:196479..197643 | TCONS_00010198-exon-sc0000103-1491911889:196479..197643 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103 | supercontig | sc0000103:196479..199009 - |
Blast
The following BLAST results are available for this feature:
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