TCONS_00010193 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010193
Unique NameTCONS_00010193
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3791

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010193 ID=TCONS_00010193|Name=TCONS_00010193|organism=Clytia hemisphaerica|type=transcript|length=3791bp
GGAAGTTGCTAATTTCAAGTTTACGTAAACaatcttttttgtttgaaatt
tttaagggGCTGAAAATATGGGTCGGACAGAATATTTTTTGGTCGGACAT
TTCATCGATTGGGTTGGGCAATGTCCGATGATAGAGGAAAGACTAAAaat
ataccccctggaaaattttgCCCCTTCATCTATTATATTATGTCCAATAg
tagaaatagaagaaaaataaagattaaCCTCTGTTAGGGAAGATTTGTga
atagttttttgtttttgcaaaAGCACCAAATATTTTCTCATCcgatcaca
aaatttttttttgtctagTTGCAAGAGTGTGGTGTGATTGTTTAAAATGT
AACTTCCAATCAAACAAAAGTTCAGTGCGTTCATCCAattagaaaagatt
tttgataatttaactaaggaaaagtttaaaaaaagtagtAGGAAAAAATA
TAGTAATTATGGATGACCGTTTTGATAATTTAAACAATCATTATGATTAT
GAAGAACACGACAATGAAAGTGACGATGATGGCCCTGCTGTCAGCTCAGA
CGAGGAACAAAATGCAgatattgattattttttaaccATTGAAGCTGGTA
AAGATATCATCAAAGAAAAAGgaaattttccATCATCTTCAGCAAGTGGT
TCACAACTGGACGAGAAGATAGTGCTGGGTCAAACAGTAAAAAAAGATGA
TCTTTTTTATGATGCAGATATAGataaacaaaatcaagaatggATGGAta
gaaagagaaagaaaaattcttcATCAGGTGGTGAGACCTCCTCTGCTCAT
AAAGCTCCAAAAAGTGACGCCATTTTAAGTTGTCCTGGATGCATGGTAAC
CGTTTGTATTGATTGCCAGAGGCATGACATCTACAAGACACAATTTCGAG
CCATGTTTGTTATGAACTGTTATGTAGTAGCTGATGAAGTACTCAAAtac
gaaacaaaaaataaatctaaaaaGAGAAGGAAAAAAGAAGGACCAGGGAA
GTTGGTCCCGGTTGAAAAAGacagtgaagaaattttaaataagGACCTTG
AGATTTATAATCCCGTGAAATGTGATTGTTGTCAGACTGAACTTGCTGTt
tacgataaaaatgaaatctaTCATTTCCACAATGTTCTTGAAAGCTTGTC
TTGACACTTTAGAAGATCTTATCGAATTTGAAACTTATCGACCTCATGGA
GAATTTTGATGGAtagatttttgtcaattttttatagttcataaattatt
ttgttttcactttaAGATGTAAATATTTATTTAGAGATAAACATAAAAGA
TGAATTAAATAACCAAGGTTttgttgaaaactttttttttctccttatat
acactgaattttcttttctttatagtaaataaatcactaaaaaaggaTCC
AGCTACTTATTTTTGAGGAATGCACCAGCAAAATCTTCCTGACACTAAAA
CAAATGCAGTGCAAAACCCTGTATCCATTCTCCCTGCAAATGGGTATAAC
AAACGTACTGAATACAAAATTGCAACCAAACTGAAAGTGGCAGAAAAGTT
ACAAATCTCAACTGAAACATTACCTCAATCAATGAAAGACAATCTTGATC
TAGTACGTAATGTTGAAGTCCAATCAACTGAAAACATTTCGTTCATCCAT
AAAGCACCCAAAAGAAGACCACCAAAGCCGCAAAAAGAAATAGTAGTAGT
GTCTGAACTCACTAGCAAGGATAGACATCGTTACAAGGAAGCTGATCGCA
GAATCAAAGAGAAGTTTGATTTTGACAGTTTAATGACTGTTCTTGAGCTT
GACAACAAAATGAACAAGAGTGATGTATTGAATGTAGCCAGAAACGTGAT
CAACACTGAAACATCACATCGGAATTTCTTAGTGACTGAACTGAGGAAAC
TAATAGACTTTAATATTCTTCCTAAATTACAAAGACTTGTTAGCGAGTCA
GGGGATCGCACATCATGCCATTGTCATGATAATTCAAATGGTTATTTAAA
AGATGTTTTGAAGCATTTTGATGAGAAGTACAATAAACAAATTGATTCAG
CGTTAGTAAATGCATTACTAATACTGTTACGAGATTTGTGTTATCAGTGC
TTACGCTTAAAATCAATGAGTCTACACCATTATATAATCAAAACCCAAGT
TTTAAAAAACACGTCTGCACCAGAAAGTGTTCCAGCCGTTATGCTCTCAC
CAGATGACAATCCAACCATAGTTTTTTTACCAGATAAAGCAACAAGCTCT
CATGCTCCCACCAAAGGTGCTGTATCAGAAAGCTCTACAAGCACGAGGGT
TCCCTCAGAAGTTGCTGTACCTAATAACTCTCCTTCAAGAACgggaatgt
ttttcaaaaatgcccTTTCCATAACACCAACAACTCCTCAAATAGCGGCA
ATAGCAGCACCACTCTATCCACAGCATTCACATCATTCACATACAAATAC
GATCTTACATTCTGTACAGCCACCACCTCGGCCGCAAACACATATAATTC
TACAGCCTATACAACCGCAAGCAAATATGGTACAACCTGTTACTTTTCAA
CCAAATAAAAGGAAACGAATTGATAATAAATTTTTATACGTTCCAAACCA
GCAGCTCCCTTATCAAAGAAATCCTTATTTGACGCCAAGTACGTTACAAG
TTTTGGAAGCTCAAGCACCTTCCAAGTCAGAATCCATTGAAAGATATGca
gatgaaattgaaaatggaaTCAATATTGACGATGGACTTGCAGCTTTGGT
TTGATCTGTTTTTATATATACATCAGCAATTGAATTCCTTCTTACACCAA
TATTGCAAACAATGCGCAATCAATTTAAGATTTTGAGTAGGGTTCAAAAC
CACTTCCaaccttttctttcttttgatttttgaaattggCTTGCTTATAC
CTAATCAGATTTTTAATTCTAGACCTAGAAATCATTCTAGCTTGGTTTAG
ACACAACTCCCTTGTTGCAAATCCAGAGAAGTTTCAGGTGTTGTTTCCAG
GCAACTTTTCTATTGTTCATGCAAACTCTGTTCCATATTCtagtattttt
aaattttaaaatattatttactaTATAGTAAATATTCGAATGTCATGTTG
GATTTAATTAGTACTTGTAACTATTTTTTATtaccaacgttaaataaaga
acaaataaaataaataaaatagacAAGACGCCATAACTATAGGTACAACA
TTCaagtaaattttaaaaaaaaatacctaggcgagacaaatttaatttat
tgttctacaaGAAAACCTTTAGAAGAAATATGGATCAGTCGGTCGGTGTA
ATAGAAATCTATTTCATAAAAGCTAGGGTCGGAAGGTCAACATCTGAAAA
AAATTGGGACATTTTCAAAGTCCCAAATTTTGCATAAGTGAGCTTTTTGT
TTTCTCAAGGTTTGATACTTCATAATCAACTCTGGGGTCAATTATGGAGC
ATGGCTGTAAGACCGTTTCaattattaaaatttaatttctcaGAATTATA
ATAATGACATTATGATATGATTTGTCCTGGTCGCCCAGTACAATGCACTG
GGACCAGTATTGCGTGCTTAGTCTGTTGCACAGTATTTTTGTGATGGGTG
GGTTTTTTCAGTTTTATTCTATTTGGAGTTTATCAAATATTGATTCTCAT
gcatattttttataaattatttttatttgaattttatttatgTTAGGCAA
ATGAATAATTAGgattagattttgaaaatttaaaattatgatcataaaat
ataaaattaagtATGGATTAAGAATACATATAGTATAGAGT
Run BLAST on NCBI

protein sequence of TCONS_00010193-protein

>TCONS_00010193-protein ID=TCONS_00010193-protein|Name=TCONS_00010193-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MHQQNLPDTKTNAVQNPVSILPANGYNKRTEYKIATKLKVAEKLQISTET
LPQSMKDNLDLVRNVEVQSTENISFIHKAPKRRPPKPQKEIVVVSELTSK
DRHRYKEADRRIKEKFDFDSLMTVLELDNKMNKSDVLNVARNVINTETSH
RNFLVTELRKLIDFNILPKLQRLVSESGDRTSCHCHDNSNGYLKDVLKHF
DEKYNKQIDSALVNALLILLRDLCYQCLRLKSMSLHHYIIKTQVLKNTSA
PESVPAVMLSPDDNPTIVFLPDKATSSHAPTKGAVSESSTSTRVPSEVAV
PNNSPSRTGMFFKNALSITPTTPQIAAIAAPLYPQHSHHSHTNTILHSVQ
PPPRPQTHIILQPIQPQANMVQPVTFQPNKRKRIDNKFLYVPNQQLPYQR
NPYLTPSTLQVLEAQAPSKSESIERYADEIENGINIDDGLAALV
Run BLAST on NCBI

transcript from alignment at sc0000103:104212..109496-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010193 ID=TCONS_00010193|Name=TCONS_00010193|organism=Clytia hemisphaerica|type=transcript|length=5285bp|location=Sequence derived from alignment at sc0000103:104212..109496- (Clytia hemisphaerica)
GGAAGTTGCTAATTTCAAGTTTACGTAAACAATCTTTTTTGTTTGAAATT
TTTAAGGGGCTGAAAATATGGGTCGGACAGAATATTTTTTGGTCGGACAT
TTCATCGATTGGGTTGGGCAATGTCCGATGATAGAGGAAAGACTAAAAAT
ATACCCCCTGGAAAATTTTGCCCCTTCATCTATTATATTATGTCCAATAG
TAGAAATAGAAGAAAAATAAAGATTAACCTCTGTTAGGGAAGATTTGTGA
ATAGTTTTTTGTTTTTGCAAAAGCACCAAATATTTTCTCATCCGATCACA
AAATTTTTTTTTGTCTAGTTGCAAGAGTGTGGTGTGATTGTTTAAAATGT
AACTTCCAATCAAACAAAAGTTCAGTGCGTTCATCCAATTAGAAAAGATT
TTTGATAATTTAACTAAGGAAAAGTTTAAAAAAAGTAGTAGGAAAAAATA
TAGTAATTATGGATGACCGTTTTGATAATTTAAACAATCATTATGATTAT
GAAGAACACGACAATGAAAGTGACGATGATGGCCCTGCTGTCAGGTAATT
TCATTATTTGAATTGGGAGTTTTGTGGTTGATAAACATCAATACATCTGA
TTCTGTGTAAGTGAAAGGATATATAGATAACTTTTACTTTTGAATACCAT
CCAAGAGCTCTAAGAACTGACCTTTAACAAAGATTTTTCTCTGGGAATTT
TATAAGTAAGAACTTCTTGATTTTCTTATTTTCTGCTTTTAGCTCAGACG
AGGAACAAAATGCAGATATTGATTATTTTTTAACCATTGAAGCTGGTAAA
GATATCATCAAAGAAAAAGGTGCTTATCTCATAATTCTTTTTTTGATTAT
CTTATTAGTAAATTTCTGAGGTGGGTTCATTGTTTTTTTCGCTCTCAAAA
TAGATCACCCCAATAGGTTCGATAAAAATCAAGATTGCTAATCATATTCT
TGTAATATTCTTTCTTACAATAAATTATCAAGTTTTTTGAATTTTGAAGT
TTGTGCTTAATTTTTCAGGAAATTTTCCATCATCTTCAGCAAGTGGTTCA
CAACTGGACGAGAAGATAGTGCTGGGTCAAACAGTAAAAAAAGATGATCT
TTTTTATGATGCAGATATAGATAAACAAAATCAAGAATGGATGGATAGAA
AGAGAAAGAAAAATTCTTCATCAGGTCTGTTTTTATTAGACATTCAAACT
GATTCATATAAAGGTTTTGGCTTGTTCATTTTATGCTTATAATTATACAA
GTGGAAATTCTCAAATTTTTCCATTATAGAATCGATTGAATAGTTTGTTT
TGCAATGATGCGTTGACCATTATTGTTTGCAGTTAATTTTGTTAAATTTT
GTTAGTTTTTTTAGATTAATCTTTTTTACAAACATTATTTTGAGATTTAT
TTGATTGATTTCCTGACAGGTGGTGAGACCTCCTCTGCTCATAAAGCTCC
AAAAAGTGACGCCATTTTAAGTTGTCCTGGATGCATGGTAACCGTTTGTA
TTGATTGCCAGAGGTATGTTCATTAATCTTATTTAGTTTGTTTAGATTGT
ATCAAAATTTTTCTATTTTAATTAGTTTTTCAATTTAGGCTTTCTACTTC
AGGCAAGACCAACAAGTAAAAGCTAAAGAATCAATCTCTATTTTCAAAAA
TTCAGAAAATGTCCGACCTATTGGGAAATAGACTACAACAGTTACCACTT
ACTATATACAATTGTTTGTTTTAGGCATGACATCTACAAGACACAATTTC
GAGCCATGTTTGTTATGAACTGTTATGTAGTAGCTGATGAAGTACTCAAA
TACGAAACAAAAAATAAATCTAAAAAGAGAAGGAAAAAAGAAGGACCAGG
GAAGTTGGTCCCGGTTGAAAAAGACAGTGAAGAAATTTTAAATAAGGACC
TTGAGATTTATAATCCCGTGAAATGTGATTGTTGTCAGACTGAACTTGCT
GTTTACGATAAAAATGAAATCTATCATTTCCACAATGTTCTTGAAAGCTT
GTCTTGACACTTTAGAAGATCTTATCGAATTTGAAACTTATCGACCTCAT
GGAGAATTTTGATGGATAGATTTTTGTCAATTTTTTATAGTTCATAAATT
ATTTTGTTTTCACTTTAAGATGTAAATATTTATTTAGAGATAAACATAAA
AGATGAATTAAATAACCAAGGTTTTGTTGAAAACTTTTTTTTTCTCCTTA
TATACACTGAATTTTCTTTTCTTTATAGTAAATAAATCACTAAAAAAGGA
TCCAGCTACTTATTTTTGAGGAATGCACCAGCAAAATCTTCCTGACACTA
AAACAAATGCAGGTATAGATATTGTTCAATATTTTTTCAAGGCCAATGCT
CAATTGACACCCTTTTTTTATGTGAACCAAATGTTTGACATCCCTTTTTA
TGTGAACCAAAGCATTAGAATCAAAAATTTATATGTCAAATTTTAAGTTT
GCCTTTTAGACTAGTCATAGCTTCACTAAAATACCACTGTCCTAATAGCC
TTTTATGAATTGATATACTGATAATGTACGCAATCCCTTGTTTACTCTGT
AAGAATCCTGCTTACTGTCCATTATCTTCCGTGATGCTATGGGTGCTTCC
TCACTTGCTACGCTCGTTGCGTTGGCAATTATAATGAAAAAAGACTTTTC
ACTTGATTGAAGACACAGTTTGTAATTAAAGCTCATGCCTTTTCTGTTGC
TAACCTGCTTTCACCTCAATTTCATTATTCTAATTCCATTTGATTATTTT
TCTCTAGTGCAAAACCCTGTATCCATTCTCCCTGCAAATGGGTATAACAA
ACGTACTGAATACAAAATTGCAACCAAACTGAAAGTGGCAGAAAAGTTAC
AAATCTCAACTGAAACATTACCTCAATCAATGAAAGACAATCTTGATCTA
GTACGTAATGTTGAAGTCCAATCAACTGAAAACATTTCGTTCATCCATAA
AGCACCCAAAAGAAGACCACCAAAGCCGCAAAAAGAAATAGTAGTAGTGT
CTGAACTCACTAGCAAGGATAGACATCGTTACAAGGAAGCTGATCGCAGA
ATCAAAGAGAAGTTTGATTTTGACAGTTTAATGACTGTTCTTGAGCTTGA
CAACAAAATGAACAAGGTGAATGCACAAATTCTTTTTCTTGATGAAAGGC
CTGATATAACACAATAAGTAATACTCTAGTTTTGTTTCTACATTTCATCC
AGAATGTTGTATTAATTATTATTCTACTTTTCCTTATTTGATTTCTCCCA
ACTGCTGAAAAATATCATGGTAGAAATTACGACTGCATCACTATCTCCTT
TCTCATTTTTAGAGTGATGTATTGAATGTAGCCAGAAACGTGATCAACAC
TGAAACATCACATCGGAATTTCTTAGTGACTGAACTGAGGAAACTAATAG
ACTTTAATATTCTTCCTAAATTACAAAGACTTGTTAGCGAGTCAGGGGAT
CGCACATCATGCCATTGTCATGATAATTCAAATGGTTATTTAAAAGATGT
TTTGAAGCATTTTGATGAGAAGTACAATAAACAAATTGATTCAGCGTTAG
TAAATGCATTACTAATACTGTTACGAGATTTGTGTTATCAGTGCTTACGC
TTAAAATCAATGAGTCTACACCATTATATAATCAAAACCCAAGTTTTAAA
AAACACGTCTGCACCAGAAAGTGTTCCAGCCGTTATGCTCTCACCAGATG
ACAATCCAACCATAGTTTTTTTACCAGATAAAGCAACAAGCTCTCATGCT
CCCACCAAAGGTGCTGTATCAGAAAGCTCTACAAGCACGAGGGTTCCCTC
AGAAGTTGCTGTACCTAATAACTCTCCTTCAAGAACGGGAATGTTTTTCA
AAAATGCCCTTTCCATAACACCAACAACTCCTCAAATAGCGGCAATAGCA
GCACCACTCTATCCACAGCATTCACATCATTCACATACAAATACGATCTT
ACATTCTGTACAGCCACCACCTCGGCCGCAAACACATATAATTCTACAGC
CTATACAACCGCAAGCAAATATGGTACAACCTGTTACTTTTCAACCAAAT
AAAAGGAAACGAATTGATAATAAATTTTTATACGTTCCAAACCAGCAGCT
CCCTTATCAAAGAAATCCTTATTTGACGCCAAGTACGTTACAAGTTTTGG
AAGCTCAAGCACCTTCCAAGTCAGAATCCATTGAAAGATATGCAGATGAA
ATTGAAAATGGAATCAATATTGACGATGGACTTGCAGCTTTGGTTTGATC
TGTTTTTATATATACATCAGCAATTGAATTCCTTCTTACACCAATATTGC
AAACAATGCGCAATCAATTTAAGATTTTGAGTAGGGTTCAAAACCACTTC
CAACCTTTTCTTTCTTTTGATTTTTGAAATTGGCTTGCTTATACCTAATC
AGATTTTTAATTCTAGACCTAGAAATCATTCTAGCTTGGTTTAGACACAA
CTCCCTTGTTGCAAATCCAGAGAAGTTTCAGGTGTTGTTTCCAGGCAACT
TTTCTATTGTTCATGCAAACTCTGTTCCATATTCTAGTATTTTTAAATTT
TAAAATATTATTTACTATATAGTAAATATTCGAATGTCATGTTGGATTTA
ATTAGTACTTGTAACTATTTTTTATTACCAACGTTAAATAAAGAACAAAT
AAAATAAATAAAATAGACAAGACGCCATAACTATAGGTACAACATTCAAG
TAAATTTTAAAAAAAAATACCTAGGCGAGACAAATTTAATTTATTGTTCT
ACAAGAAAACCTTTAGAAGAAATATGGATCAGTCGGTCGGTGTAATAGAA
ATCTATTTCATAAAAGCTAGGGTCGGAAGGTCAACATCTGAAAAAAATTG
GGACATTTTCAAAGTCCCAAATTTTGCATAAGTGAGCTTTTTGTTTTCTC
AAGGTTTGATACTTCATAATCAACTCTGGGGTCAATTATGGAGCATGGCT
GTAAGACCGTTTCAATTATTAAAATTTAATTTCTCAGAATTATAATAATG
ACATTATGATATGATTTGTCCTGGTCGCCCAGTACAATGCACTGGGACCA
GTATTGCGTGCTTAGTCTGTTGCACAGTATTTTTGTGATGGGTGGGTTTT
TTCAGTTTTATTCTATTTGGAGTTTATCAAATATTGATTCTCATGCATAT
TTTTTATAAATTATTTTTATTTGAATTTTATTTATGTTAGGCAAATGAAT
AATTAGGATTAGATTTTGAAAATTTAAAATTATGATCATAAAATATAAAA
TTAAGTATGGATTAAGAATACATATAGTATAGAGT

Coding sequence (CDS) from alignment at sc0000103:104212..109496-

>TCONS_00010193 ID=TCONS_00010193|Name=TCONS_00010193|organism=Clytia hemisphaerica|type=CDS|length=4005bp|location=Sequence derived from alignment at sc0000103:104212..109496- (Clytia hemisphaerica)
AGTGATGTATTGAATGTAGCCAGAAACGTGATCAACACTGAAACATCACA
TCGGAATTTCTTAGTGACTGAACTGAGGAAACTAATAGACTTTAATATTC
TTCCTAAATTACAAAGACTTGTTAGCGAGTCAGGGGATCGCACATCATGC
CATTGTCATGATAATTCAAATGGTTATTTAAAAGATGTTTTGAAGCATTT
TGATGAGAAGTACAATAAACAAATTGATTCAGCGTTAGTAAATGCATTAC
TAATACTGTTACGAGATTTGTGTTATCAGTGCTTACGCTTAAAATCAATG
AGTCTACACCATTATATAATCAAAACCCAAGTTTTAAAAAACACGTCTGC
ACCAGAAAGTGTTCCAGCCGTTATGCTCTCACCAGATGACAATCCAACCA
TAGTTTTTTTACCAGATAAAGCAACAAGCTCTCATGCTCCCACCAAAGGT
GCTGTATCAGAAAGCTCTACAAGCACGAGGGTTCCCTCAGAAGTTGCTGT
ACCTAATAACTCTCCTTCAAGAACGGGAATGTTTTTCAAAAATGCCCTTT
CCATAACACCAACAACTCCTCAAATAGCGGCAATAGCAGCACCACTCTAT
CCACAGCATTCACATCATTCACATACAAATACGATCTTACATTCTGTACA
GCCACCACCTCGGCCGCAAACACATATAATTCTACAGCCTATACAACCGC
AAGCAAATATGGTACAACCTGTTACTTTTCAACCAAATAAAAGGAAACGA
ATTGATAATAAATTTTTATACGTTCCAAACCAGCAGCTCCCTTATCAAAG
AAATCCTTATTTGACGCCAAGTACGTTACAAGTTTTGGAAGCTCAAGCAC
CTTCCAAGTCAGAATCCATTGAAAGATATGCAGATGAAATTGAAAATGGA
ATCAATATTGACGATGGACTTGCAGCTTTGGTTTGATGCAAAACCCTGTA
TCCATTCTCCCTGCAAATGGGTATAACAAACGTACTGAATACAAAATTGC
AACCAAACTGAAAGTGGCAGAAAAGTTACAAATCTCAACTGAAACATTAC
CTCAATCAATGAAAGACAATCTTGATCTAGTACGTAATGTTGAAGTCCAA
TCAACTGAAAACATTTCGTTCATCCATAAAGCACCCAAAAGAAGACCACC
AAAGCCGCAAAAAGAAATAGTAGTAGTGTCTGAACTCACTAGCAAGGATA
GACATCGTTACAAGGAAGCTGATCGCAGAATCAAAGAGAAGTTTGATTTT
GACAGTTTAATGACTGTTCTTGAGCTTGACAACAAAATGAACAAGATGCA
CCAGCAAAATCTTCCTGACACTAAAACAAATGCAGAGTGATGTATTGAAT
GTAGCCAGAAACGTGATCAACACTGAAACATCACATCGGAATTTCTTAGT
GACTGAACTGAGGAAACTAATAGACTTTAATATTCTTCCTAAATTACAAA
GACTTGTTAGCGAGTCAGGGGATCGCACATCATGCCATTGTCATGATAAT
TCAAATGGTTATTTAAAAGATGTTTTGAAGCATTTTGATGAGAAGTACAA
TAAACAAATTGATTCAGCGTTAGTAAATGCATTACTAATACTGTTACGAG
ATTTGTGTTATCAGTGCTTACGCTTAAAATCAATGAGTCTACACCATTAT
ATAATCAAAACCCAAGTTTTAAAAAACACGTCTGCACCAGAAAGTGTTCC
AGCCGTTATGCTCTCACCAGATGACAATCCAACCATAGTTTTTTTACCAG
ATAAAGCAACAAGCTCTCATGCTCCCACCAAAGGTGCTGTATCAGAAAGC
TCTACAAGCACGAGGGTTCCCTCAGAAGTTGCTGTACCTAATAACTCTCC
TTCAAGAACGGGAATGTTTTTCAAAAATGCCCTTTCCATAACACCAACAA
CTCCTCAAATAGCGGCAATAGCAGCACCACTCTATCCACAGCATTCACAT
CATTCACATACAAATACGATCTTACATTCTGTACAGCCACCACCTCGGCC
GCAAACACATATAATTCTACAGCCTATACAACCGCAAGCAAATATGGTAC
AACCTGTTACTTTTCAACCAAATAAAAGGAAACGAATTGATAATAAATTT
TTATACGTTCCAAACCAGCAGCTCCCTTATCAAAGAAATCCTTATTTGAC
GCCAAGTACGTTACAAGTTTTGGAAGCTCAAGCACCTTCCAAGTCAGAAT
CCATTGAAAGATATGCAGATGAAATTGAAAATGGAATCAATATTGACGAT
GGACTTGCAGCTTTGGTTTGATGCAAAACCCTGTATCCATTCTCCCTGCA
AATGGGTATAACAAACGTACTGAATACAAAATTGCAACCAAACTGAAAGT
GGCAGAAAAGTTACAAATCTCAACTGAAACATTACCTCAATCAATGAAAG
ACAATCTTGATCTAGTACGTAATGTTGAAGTCCAATCAACTGAAAACATT
TCGTTCATCCATAAAGCACCCAAAAGAAGACCACCAAAGCCGCAAAAAGA
AATAGTAGTAGTGTCTGAACTCACTAGCAAGGATAGACATCGTTACAAGG
AAGCTGATCGCAGAATCAAAGAGAAGTTTGATTTTGACAGTTTAATGACT
GTTCTTGAGCTTGACAACAAAATGAACAAGATGCACCAGCAAAATCTTCC
TGACACTAAAACAAATGCAGAGTGATGTATTGAATGTAGCCAGAAACGTG
ATCAACACTGAAACATCACATCGGAATTTCTTAGTGACTGAACTGAGGAA
ACTAATAGACTTTAATATTCTTCCTAAATTACAAAGACTTGTTAGCGAGT
CAGGGGATCGCACATCATGCCATTGTCATGATAATTCAAATGGTTATTTA
AAAGATGTTTTGAAGCATTTTGATGAGAAGTACAATAAACAAATTGATTC
AGCGTTAGTAAATGCATTACTAATACTGTTACGAGATTTGTGTTATCAGT
GCTTACGCTTAAAATCAATGAGTCTACACCATTATATAATCAAAACCCAA
GTTTTAAAAAACACGTCTGCACCAGAAAGTGTTCCAGCCGTTATGCTCTC
ACCAGATGACAATCCAACCATAGTTTTTTTACCAGATAAAGCAACAAGCT
CTCATGCTCCCACCAAAGGTGCTGTATCAGAAAGCTCTACAAGCACGAGG
GTTCCCTCAGAAGTTGCTGTACCTAATAACTCTCCTTCAAGAACGGGAAT
GTTTTTCAAAAATGCCCTTTCCATAACACCAACAACTCCTCAAATAGCGG
CAATAGCAGCACCACTCTATCCACAGCATTCACATCATTCACATACAAAT
ACGATCTTACATTCTGTACAGCCACCACCTCGGCCGCAAACACATATAAT
TCTACAGCCTATACAACCGCAAGCAAATATGGTACAACCTGTTACTTTTC
AACCAAATAAAAGGAAACGAATTGATAATAAATTTTTATACGTTCCAAAC
CAGCAGCTCCCTTATCAAAGAAATCCTTATTTGACGCCAAGTACGTTACA
AGTTTTGGAAGCTCAAGCACCTTCCAAGTCAGAATCCATTGAAAGATATG
CAGATGAAATTGAAAATGGAATCAATATTGACGATGGACTTGCAGCTTTG
GTTTGATGCAAAACCCTGTATCCATTCTCCCTGCAAATGGGTATAACAAA
CGTACTGAATACAAAATTGCAACCAAACTGAAAGTGGCAGAAAAGTTACA
AATCTCAACTGAAACATTACCTCAATCAATGAAAGACAATCTTGATCTAG
TACGTAATGTTGAAGTCCAATCAACTGAAAACATTTCGTTCATCCATAAA
GCACCCAAAAGAAGACCACCAAAGCCGCAAAAAGAAATAGTAGTAGTGTC
TGAACTCACTAGCAAGGATAGACATCGTTACAAGGAAGCTGATCGCAGAA
TCAAAGAGAAGTTTGATTTTGACAGTTTAATGACTGTTCTTGAGCTTGAC
AACAAAATGAACAAGATGCACCAGCAAAATCTTCCTGACACTAAAACAAA
TGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005717XLOC_005717Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010193-proteinTCONS_00010193-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010193-exon-sc0000103-1575043694:108953..109496TCONS_00010193-exon-sc0000103-1575043694:108953..109496Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1575043694:108678..108754TCONS_00010193-exon-sc0000103-1575043694:108678..108754Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1575043694:108323..108478TCONS_00010193-exon-sc0000103-1575043694:108323..108478Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1575043694:107984..108077TCONS_00010193-exon-sc0000103-1575043694:107984..108077Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1575043694:107185..107772TCONS_00010193-exon-sc0000103-1575043694:107185..107772Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1575043694:106381..106739TCONS_00010193-exon-sc0000103-1575043694:106381..106739Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1575043694:104212..106184TCONS_00010193-exon-sc0000103-1575043694:104212..106184Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1510915933:108953..109496TCONS_00010193-exon-sc0000103-1510915933:108953..109496Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1510915933:108678..108754TCONS_00010193-exon-sc0000103-1510915933:108678..108754Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1510915933:108323..108478TCONS_00010193-exon-sc0000103-1510915933:108323..108478Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1510915933:107984..108077TCONS_00010193-exon-sc0000103-1510915933:107984..108077Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1510915933:107185..107772TCONS_00010193-exon-sc0000103-1510915933:107185..107772Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1510915933:106381..106739TCONS_00010193-exon-sc0000103-1510915933:106381..106739Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1510915933:104212..106184TCONS_00010193-exon-sc0000103-1510915933:104212..106184Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1491911889:108953..109496TCONS_00010193-exon-sc0000103-1491911889:108953..109496Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1491911889:108678..108754TCONS_00010193-exon-sc0000103-1491911889:108678..108754Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1491911889:108323..108478TCONS_00010193-exon-sc0000103-1491911889:108323..108478Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1491911889:107984..108077TCONS_00010193-exon-sc0000103-1491911889:107984..108077Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1491911889:107185..107772TCONS_00010193-exon-sc0000103-1491911889:107185..107772Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1491911889:106381..106739TCONS_00010193-exon-sc0000103-1491911889:106381..106739Clytia hemisphaericaexon
TCONS_00010193-exon-sc0000103-1491911889:104212..106184TCONS_00010193-exon-sc0000103-1491911889:104212..106184Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103supercontigsc0000103:104212..109496 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.35487	2.83712	0.569783	0.836166	5.42907	3.57511	2.04878	2.32184	1.5549	1.92599	1.95439	1.50817	1.84075	0.811	0.904878	0.933413	1.95183	1.22615	0.624103	0.839672	1.69971	0.791665	7.24769	4.94399	2.16118	2.25027	0.805034	0.98189	3.71888	5.21648
Blast
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BLAST of TCONS_00010193 vs. Swiss-Prot (Human)
Match: EAPP (E2F-associated phosphoprotein OS=Homo sapiens GN=EAPP PE=1 SV=4)

HSP 1 Score: 132.494 bits (332), Expect = 3.992e-33
Identity = 71/154 (46.10%), Postives = 100/154 (64.94%), Query Frame = 3 
Query:  696 DDLFYDADIDKQNQEWMDRKRKKNSSSGGETSSAHK-APKSDAILSCPGCMVTVCIDCQRHDIYKTQFRAMFVMNCYVVADEVLXXXXXXXXXXXXXXXXXXXLVPVEKDSEEILNKDL-EIYNPVKCDCCQTELAVYDKNEIYHFHNVLESLS 1151
            D+L YD + D ++Q W+D +R+     G + S   +  P SDA+L+CP CM T+C+DCQRH+ YKTQ+RAMFVMNC +  +EVL       S+ R+K+    K+    +D+ E    D+ EIY+PV C  C TE+AVYDK+E++HF NVL S S
Sbjct:  135 DELLYDPEKDNRDQAWVDAQRRGYHGLGPQRSRQQQPVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNCSINKEEVL---RYKASENRKKRRVHKKMRSNREDAAEKAETDVEEIYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS 285
The following BLAST results are available for this feature:
BLAST of TCONS_00010193 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EAPP3.992e-3346.10E2F-associated phosphoprotein OS=Homo sapiens GN=E... [more]
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