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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010116 ID=TCONS_00010116|Name=TCONS_00010116|organism=Clytia hemisphaerica|type=transcript|length=887bp
TCACATCATCATTTATTACCTCACATCACACTTagtatattttcttttgt
attatATAATTACTCTAGGTTTTTCTCACTTAATGATTTTATAATTGGGG
AGCAATTATCTCCTcagatttctcttttttttactCTCTCGTTTTTTTCA
TTCTGTGTTGAAACATTGTAGAGCAAGGAGCTCAATTCTTTGTTGACATG
TTGTCAGTCAGAGTCAAACTTAAACTTTATTAAATTGGTAAATGGAATTT
GCTGAATTGAATATTCAGCACTTCACTGTGGATTTACCCAGCTGGTAATC
CACTCATTTCACTGGTCATTTTCACAGCAATCACATTGGGCCAGCCGttt
gaACACAAAGATATCAATCCTTCAATCAATATCTTGTTACAAACCCTCTC
AAGTGTGTTGCACTATTCCACATTCAAACGGGACCACACCCTCCAATCAC
ATTCAACTCAATCAACTTTATCAATTCAGCCAAACATTTATGTCAAAGAG
AAATCTTCCTCGTATAAACTATAAGTAACTTCACAACACTGGTCGGAGTA
TCCACGTCGAGGACCATCTTTCCAGTCAACTTGCAAATCTTTCACTTCGT
GAAACCATCATGCCTTCGACAAATGAAAGCAccatcaataaaatcaaagt
ccTAATTGCAGCCATCAATGATGCAATCGATGAGACACCAATCAATGGTT
TGACTGCAAACAATCCACGCCCGTCGAGTTcttattcttcaaaaacaagC
TCTCAGAATCATGTCTTTCTCTGACTTTCGTGCGCATACTTTTCCtctgt
ttttagaatttaaacttcttcaattttttgactttgtcaaATACCTTAAT
ATCCtctttcttttcaaacttttgaatcGAAAATTAC Run BLAST on NCBI transcript from alignment at sc0000102:380651..381858- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010116 ID=TCONS_00010116|Name=TCONS_00010116|organism=Clytia hemisphaerica|type=transcript|length=1208bp|location=Sequence derived from alignment at sc0000102:380651..381858- (Clytia hemisphaerica)
TCACATCATCATTTATTACCTCACATCACACTTAGTATATTTTCTTTTGT
ATTATATAATTACTCTAGGTTTTTCTCACTTAATGATTTTATAATTGGGG
AGCAATTATCTCCTCAGATTTCTCTTTTTTTTACTCTCTCGTTTTTTTCA
TTCTGTGTTGAAACATTGTAGAGCAAGGAGCTCAATTCTTTGTTGACATG
TTGTCAGTCAGAGTCAAACTTAAACTTTATTAAATTGGTAAATGGAATTT
GCTGAATTGAATATTCAGCACTTCACTGTGGATTTACCCAGCTGGTAATC
CACTCATTTCACTGGTCATTTTCACAGCAATCACATTGGGCCAGCCGGTA
AGCTTTTGTTTGCATTTCTCACTTTTTGTTTTCTCTTCTCCTAGGTTGGC
TCAACTTTAGGCTCTGCATTTGCCCTTTTGGCACAGGCTTCTACCCATTG
CTGTCCTAGGTTAGGTTAAGACTTAGTAAATTTTTCTAAGATTCTATCAT
ACTTTTATTCTTTCATATCATTTTCTGTTCACTCAAATTGTTTCTCAAAT
TAGTCTAAGTTTCATAAATCAATTATCAATTTAAGCTCCTAATTTTGTCA
TTTAGTCACTATTTTCATTTATTTTATCAATTCAAATACTTATTATTCCT
TAATTTATTTTCATTCAGTTTGAACACAAAGATATCAATCCTTCAATCAA
TATCTTGTTACAAACCCTCTCAAGTGTGTTGCACTATTCCACATTCAAAC
GGGACCACACCCTCCAATCACATTCAACTCAATCAACTTTATCAATTCAG
CCAAACATTTATGTCAAAGAGAAATCTTCCTCGTATAAACTATAAGTAAC
TTCACAACACTGGTCGGAGTATCCACGTCGAGGACCATCTTTCCAGTCAA
CTTGCAAATCTTTCACTTCGTGAAACCATCATGCCTTCGACAAATGAAAG
CACCATCAATAAAATCAAAGTCCTAATTGCAGCCATCAATGATGCAATCG
ATGAGACACCAATCAATGGTTTGACTGCAAACAATCCACGCCCGTCGAGT
TCTTATTCTTCAAAAACAAGCTCTCAGAATCATGTCTTTCTCTGACTTTC
GTGCGCATACTTTTCCTCTGTTTTTAGAATTTAAACTTCTTCAATTTTTT
GACTTTGTCAAATACCTTAATATCCTCTTTCTTTTCAAACTTTTGAATCG
AAAATTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010116-exon-sc0000102-1575043694:381512..381858 | TCONS_00010116-exon-sc0000102-1575043694:381512..381858 | Clytia hemisphaerica | exon |
| TCONS_00010116-exon-sc0000102-1575043694:380651..381190 | TCONS_00010116-exon-sc0000102-1575043694:380651..381190 | Clytia hemisphaerica | exon |
| TCONS_00010116-exon-sc0000102-1510915933:381512..381858 | TCONS_00010116-exon-sc0000102-1510915933:381512..381858 | Clytia hemisphaerica | exon |
| TCONS_00010116-exon-sc0000102-1510915933:380651..381190 | TCONS_00010116-exon-sc0000102-1510915933:380651..381190 | Clytia hemisphaerica | exon |
| TCONS_00010116-exon-sc0000102-1491911889:381512..381858 | TCONS_00010116-exon-sc0000102-1491911889:381512..381858 | Clytia hemisphaerica | exon |
| TCONS_00010116-exon-sc0000102-1491911889:380651..381190 | TCONS_00010116-exon-sc0000102-1491911889:380651..381190 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102 | supercontig | sc0000102:380651..381858 - |
Blast
The following BLAST results are available for this feature:
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