TCONS_00010106 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00010106
Unique Name	TCONS_00010106
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1271

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000102:230214..246412-

transcript sequence

>TCONS_00010106 ID=TCONS_00010106|Name=TCONS_00010106|organism=Clytia hemisphaerica|type=transcript|length=1271bp
CtagtttttattcgaaaatatGGTAGATAAGCGGCGATGGAAACAAATTT
TCCCTACTTTTCTCGAAGCAAGCAAGTCAAAAAACGATGTTAACACTTTG
CTTAGTTTTGTCGTTATTTGGTAATTTTTTACCAACTGTATCTTCCTACT
TGAATGTAGATGAGATCACTAATCTCAAATATGGCGTTGAGATTTCAGAC
AAACCTGTTCTTTTTCAAGGAAACTCCTTTTATCAGAGCCCTGATGTCAT
GACAATCTCatcaaaatttggacaaaaatataGTTGTAACTTACCGGTCC
TTCAATTACCTGAGACAGAAGATGACAATGAAGATAAAAAGATTGATCCA
ATGACTATCATATCTACCATTGACAAAAGTCTCAATGATACATGTTTAGA
GTTTaataaaGGCTGGTGGACGTACAAATTATGTCATAAGAAGAACATCA
CTCAGTATCATGTCACTGAACAAGGTGAAGTAGATAGCAAAACTACAGAG
CTTGGTGCTTATGAGAAAGAGGATGACTGGAAAGATAAAAATCTAGACga
caagaaaacaaaacatcttTATCATAAAGCTGACTACATCAATGGTTCAA
AGTGTGATCTAACATCAATATATCGGTCAACTGTAGTCCAGTATTATTGC
AGTGATGAGAACCTGAATTCAAATATGGTTATCAGAGTTGAAGAACCAGC
GACATGCGAATACATCATTTCTGTGCATGTCAAGAAACTATGTACTCATC
CTGCTTTTGAAGtcaaagagaaaacaaaaaaggtcACACTGACCTGTTCA
CCTATATTAGGAGAAAAAGCATTCAAAAGATACCAAGAAGAACAGAAATT
tattaaagaagaaaatgaccGCAAAAAGAAAGCAGCAATGGAGAAATTTG
CCAAGGAGAAAGAGGAAGCTCTGAAGCGAAGGTCTGGAAACTTTTTCAAG
CTTGATGACACAATTGATACCGGGAGTGATATGGAATTTCTACCGGTGAC
ATCAGAGTCAATTTTTGAAGAGGACGAAGGCTTGAAATTGGTTGGTGATA
TGttgaagaaaacaaaagaaattttcaatccACCAGAAGAAGtcgaagat
aaaaaagaaaatgtagCTGGAAAGGACGCTTCAGTTGGCTCTGCAAGCAA
GCTagataaaacaaataaaaaactgtTCGATTTCATTGGTAAACAGCGTA
CTCAACTCACCAAACAATTTGAAGACTTAAGATCATCGACAATGAAAGAG
ATGGCTAGGAGTAAGTCTATG

Run BLAST on NCBI

transcript from alignment at sc0000102:230214..246412-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00010106 ID=TCONS_00010106|Name=TCONS_00010106|organism=Clytia hemisphaerica|type=transcript|length=16199bp|location=Sequence derived from alignment at sc0000102:230214..246412- (Clytia hemisphaerica)
CTAGTTTTTATTCGAAAATATGGTAGATAAGCGGCGATGGAAACAAATTT
TCCCTACTTTTCTCGAAGCAAGCAAGTCAAAAAACGATGTTAACACTTTG
CTTAGTTTTGTCGTTATTTGGTAATTTTTTACCAACTGTATCTTCCTACT
TGAATGTAGATGAGATCACTAATCTCAAATATGGCGTTGAGATTTCAGAC
AAACCTGTTCTTTTTCAAGGAAACTCCTTTTATCAGGTGAGATTAGTTTT
TGAGATTTTTTAAAGATTTTTTAAGACTTGACCTGATAAATCCAACCAAA
AGAAATGATTGAAAAATAAAACTTCATTGAATGACTTTTATAAAGATGAA
CCATAATCAACCTCAACCTTTCTATCAATTTTAGCTGATAAAAAGGCACG
TGCGTTTGTCTAAACTTTTCAATATATCTCCAGAACTAACAGATTTTTTG
AAATTCTGTGGTAAAAAGGTCCAAGTTCCTGAATAGTTTTAATATGTTCT
TTGAAAAAATCATAACCATCAGTGAAATAGACCTTTTTTTAATGAGGCCA
CCCTGTTGAATAATTATGTAGTCCAGCAAAAAAAACAATGATACAATAGC
CAAGCATAATTATTATAAATAATATGCATGAAACACAGTAATTATGCATG
GCTGTATCATTGTTTTTATGCTGGACTACATAATTATTCAACAGGGTTGC
CTCTTTAAAAAAAGGTCTATACTCGTTCATCTATTTAAAAGATTGAAGAC
AAAAATTAGCGAAGAAAAATAAACCTTGAGCACAAAAAATGCTTTTTAAC
AATTTTTTCCACCAAAAAACAAATAACTGTTATAGACTTACCTTCCCCGA
ACATTGAAGAAGCCTCTACTAATTAAAGTAAATGAGATGGATAAGATAAA
GCCTTTAAATCAACCAGAATTTACAACCTTTCGTCCAAAGCTAAAGACGT
GCTTTTCTCACTGCCATCTTGTTCTTGTTTTAAAATGAGAATTCCAGAGA
ATTCCATTCGGTTCCAGTTGGCACGCTCTTTTTTGCATCCAATCAGATCG
CACGATTTCACTTTTGCTTTCTCTAGTCCAAAAAGACTGTGGGATTTGAG
TCATGTGACATTTCTATTGAAAAACCCGTGACGAATAAAATAGAAATACA
GGGGGTCACACTATTGGCTAAAGGAACTGAAAGCAAGCAATTAAGGCCAA
TATTTTTGGTTTTTCTGAAGGACAGAAGGTATAGGAAGCTTTAATACTGA
AGGAGGGATAAGGCTGGGACTATCTATTTAAAAGATATGGACAAAAAATG
CACTTTTTTGGGTGATAATTAAGATTTTAGTTAGAAACTTTAATTCTCTT
ATCCCCGTCTCGGGCCCCTCTGATATGAGCAACCACCACCTACTGAAAAT
TTCAGATCAAAACAAACAAGGAATTAATTCCTGTAACTCGATGAAAATTG
GAAAAAGCTGGTTTTGACTGTTTCTGATCCTAAAGTGCTATTTTTTGGTA
AAAGCTATGGCAATTTATGTTTAGATTTCTGGAAAGCTTACCCATTCATT
GTCAATATATTTTTTATTTGAAAGTAATCTCTTCATGGAATAAAAAGATT
TAGTCAAATCTTGTAGGGTCATTTTTCAAAATTTTTTTTGCCAAATTCGA
TTTTCGCATTTCGCCATTTTACCCTACACAAACGCACGTGAAGGGTGTCG
GAGTTAGAGGAGGGATGTTGACATTAGACCAAGTTACGGTATGGGAGCCC
TAGAAAAATAAAGTACTGTAGATATGATGAAACAGCAGTGCCAGTAGACA
AGAGACCATCCTGTATTTTTATAATATGATGTATACAGGAAGGGTATGAC
CTGTGAGGCAGATTTCTGCCTCAAAAATTTACAGTGGGAAATTAGAATTT
AGCGCTGTTCTCGCTTTACTAAAATAAAAACCAAATTTCCAAACTTGCAC
TTTCTCTAAGAAAGTGTGAAGAGTATAAAAAGGATAACAAAATTTGATTG
GCTATGTTTTCAACCGTTATTAGGATCTGGGAAATTCAAAGTCTCAGCCC
ATACCATGCTATATATTTCGCCATCAGTATATAGAATAAGAAATTCATAG
CATAGATCTCCAGGCTACAGTTCCAGTAATGTGATGATAGGTAACTTTAG
GGAACTCACCTGTCAGGACCGTCAACGGCTCTAACTTGGGACAATTGGTT
GAAACATAGGCAGCTAGCCTTTGAAGCTCTAAAACAGCAACTAATAACAT
GAAAACCAGAATATGATTCTTCAATAGGATTCAAAACTTAAAGAGCACTT
ACAAGCATCAATATGCCAGATTTAACAAAATTAATAATAGCACTGTCATC
ATTGACAATAAAACAAAGGATATTCTGTCAAGAGTCTTGTAAAATTAAAA
ATTTCAACAACTTCCATCAGAATGATCTTTCGCAGCTAAGTCTACCATTT
TTAACGTGGTCCAAGGATTGAGCCGAGAACACTTGCAGAACGCATTTTTT
GGCTATCAAAAAATTATTCCGACTCGCCCGATTTATGTTTTGAAGGTGAG
TCAGTTGGGCGACGTGAACAGAACATATTATTAATTGTCGCCTTACTGTA
ACAAGTGTTCCTAAAAGGTAGAGTAAACCCAATTGGGCTACTTATTGGGC
TACCCCTTTTTGTCCTAAATTTTACAAACTGAAGCTTTAGTTTATAATCA
GGCCATATTTTGAAAAGACAAGGCAGTGTCCGTTGGTGGCCAAAAAGGGC
ACTTTTTTCAGTGTTTTTCCATTAAATAAGCAAGGCTGTTTTTACAAATT
GTTTAGTAATTTCAAAGGGCATGAAAAATGGCCTGATGATAAAATGATAC
TAAAACCTTTGATTGATCATTTACAAAAATTGGATTTAAGATTGCCATAA
AACTAAGTCCCAATAGTCATTTTCCCAAAGGTACTGAATTATCAACTATT
TTTTATCATGGTCAGGTGCAATGTTGACTTCCTTGTTCTCTTACTCAAAA
AATTAAGACAATAAAATTTTTGAAAAACGCAGAACAATGTATGTCATAGT
TTCAGCCCACTTTTCAGGTACCCCCATTGAAGCATCGTGCCCCCAAGGAG
TTAGGTCCCCTTGAGAAATTACTTTGAGTTAGGTGCCCCCATTCAGGTAA
TGATTTTGTTTAACAATTACATTTGAGAAAAATAGCAAAATATGATGCAA
AAAGAAACAAGAACCAAAATTGGATGGGAAACTGGGCACTGAATAAATAG
ATTCAATAGTTTGAAATATTTTGAAATATTCAATTTGGAAAATATACACA
TCCCCAAGAGCCTCCATTGAGACAGCTAGGTGTACCCCCAATGAAAAGGT
AACCAAAGAATTGTAAAATATTAGCCCCCCCAGTCCTTAACCTGGCCTAG
ATGTCCTTCAGATTTCTGGGGAGAGGGGCTGACACTATGGTATATGTTCT
GTTTGGTAAAATTGAGGATGTCGCGAAAATATAATTTCCTTTTATTTTAT
TTATTTTCATTTTATATTCTCTAAATTTGGTGTTAAATGTTGTTGTTAAA
TGTTGTATTTGGTTTGTCAGTTTACAATTTGATCATTTGATCTTTCATCC
TCTTTCTTATATATTTTGGATATTTTGTCATTAAATCTATTATTCAATAG
GCTGAATAATGTTATTATTTTTGAAGTTGCTACTAAGCATGTTAGGCACA
AAGCTCTATTTCAAACACCATGTGCTTTAACCACATGGTGAATATCTTAT
GCATCATGCAATATTAATTGAAATATTTTTTAGATTCATAGCTCCTGGCA
TAGCAGATGACTTTCCTCCACAAATTTTTGGTTATTTAATTCTGGTCTGT
AAATTAAATGGGTAACCCCGATAAGTTGCCCAATTGAGGCCCCAAATTGG
GGTATTCTACCTTTTCGGAATACCCTGAATCAACTTTTCATTTTCTAACC
AATTTAATAAATGACCCCTCATTTTCTCATTTAATAAGGCGGGTTGATTA
AGTTTTAATATCACAGCAACAATTTGGAAGAGGTGGGCTGGAGTTCATAA
ATAAGTGGATGGCTCTCCTAAATCAGCTTTAGCAGAATTATGTACTTTGG
TTTCTATATGAATAAGCTCTCATGTTCTTTTAACACCCCTGACTGCTGAA
AAGCAGGTCTTTCCTTTGAGGACTACATACACTACACAATGTATTGTCAG
GCAATATATTGAAAAGGTGTCTTCAATTATAATAATTGTCAGCTCAATTT
GCAATATTCCAACAATATAGGGAGATTTCTTTTTATAATAGAGAACGTGT
TAAATTTACTTTGTACATTACGGTATATTGCGTAGTCTAAGTAGCCCTTT
AGTATATTATTTTCCTGAAAATATTTATTTGACACTATTATCATTGTTAT
TATAAAAGTACATAATTTGACTTCAATCTTAAAACTTGTTATTTAATAAC
CAAGATAACCACTGATGATGGCGTAAGCCGAAAAGCTTTTTATTCAATTT
TTCAAATATATTTTACTTCACAACTTAACATGGCGAAAATTCACTTAACT
TAATAACCAAGAAACACTGACAAACATAGTTATTTATTTCAACATAGTTT
GTTCAATACCATCCTATGAAATAATTTAGGTCTGGATACTATTTTAGTCC
CTGGTAAAAATCACCTTTGCACAACTAGCTTAGCACACCCAGTATCTTTT
TTACATAATTTTTGGTCTATCTTTACTAATGTTCTATTGTTTTAGAGCCC
TGATGTCATGACAATCTCATCAAAATTTGGACAAAAATATAGTTGTAACT
TACCGGTCCTTCAATTACCTGAGACAGAAGATGACAATGAAGATAAAAAG
ATTGATCCAATGACTATCATATCTACCATTGACAAAAGTCTCAATGATAC
ATGTTTAGAGTTTGTAAGTATTTGTAATAAGTGGTGTTAAGGGATAGTTT
CCTTTTTGTCCATGAATGTATAATTGCTTCACAGTGATCCATCAAACCTG
ATCTAGGTACAGTATGCAATTTTGGTATCTCTGCCCTTGACATCACATCC
TTTTACAGGACCACAGCATCAGTATGAAACTTCCATTTTTTTCTTTTCTT
CAAGATATTTGTTTTTAAATTGGTTTTTTCAAATTCATTTTTTTTTCAGA
ATAAAGGCTGGTGGACGTACAAATTATGTCATAAGAAGAACATCACTCAG
TATCATGTCACTGGTTTGAATGAGATTTTATTATTATGATTAGAGCAGTA
AATGTTTTTCAACAATGAAAAACAACATGGAGAGAATAAGGAAGGAACAA
GGATACAATTTGGAACCCCTTGATTCCATCTCTGAACATATTTTATCAAT
AGGCCATCGCTCCTTGAAATAATAACAACTCTCGATGGTTTTTGTAAAAT
TATGATTCTTATAGCAGTTCCGGATTTAGCTCTTGATGAAAAAAAAATAT
TTTTATGCTTTTTTTGTAGAACAAGGTGAAGTAGATAGCAAAACTACAGA
GCTTGGTGCTTATGAGAAAGAGGATGACTGGAAAGATAAAAATGTGAGAT
TTTAAAATTCACCATCCAAAAAGGGGCTATATTAATGAGAGGTCACAATT
TTTAGCTTTAAAAATAGTAAAAAAGTTTGAATGCCAAAGTTGATAGATCT
GAAGGTTTAAATTGTATGAAATAGTATTATTTGTGTTTTAACTTTTTAGC
TAGACGACAAGAAAACAAAACATCTTTATCATAAAGCTGACTACATCAAT
GGTTCAAAGTGTGATCTAACATCAATATATCGGTCAACTGTAGTCCAGGT
TTTTATAATCATTCTTTCTTTTTCCTTTTGAATTTTAAACTTAGTTTCTT
GTGTTCTGAACTACATTCTATGTTCCTATATATCGTGTTGTCTAAAATGA
GAGATTTTTATTTATCTTATTGATAAGAATTGTCCCTGTATATTAGTTTA
TTTTTCTTTCACCCTGAACTCGTGATCACAATTTATGTTATTATGAATTA
ATGCTAATACGAGAATTTAACGTTAAAGGTTTTGTTTTAAAAATAAGAGT
GATATCGTTTGCTTACTCATCAATTTTAATTCACAATCTTTTTCACATTG
GATTGACACTGATGTGGAGCAAGATTGGTCCAAAAGAAGAAAAGAAAAAC
GTTTTTTTGCTTACATCAGCATAATATAACAATTACAAATATAACAATAG
CAAGACATTGTCCTGATTTGAAATATGTGTCTGATATGAAACGGAAACAC
TTATGTAAAAGAGATGCCAAGAGATCAGGATTTCCAACCTTGGATTTTTT
TACAAAGATACAAGAACAAAAGATTCTATATTAAGAACCAATAAGGAGAT
TTTTAAAAATTCCCCTCATTTTATTTACAGTATTATTGCAGTGATGAGAA
CCTGAATTCAAATATGGTTATCAGAGTTGAAGAACCAGCGACATGCGAAT
ACATCATTTCTGTGCATGTCAAGAAACTATGTACTCATCCTGCTTTTGAA
GTCAAAGAGAAAACAAAAAAGGTCACACTGACCTGTTCACCTATATTAGG
AGAAAAAGCATTCAAAAGATACCAAGAAGAACAGAAATTTATTAAAGAAG
AAAATGACCGCAAAAAGAAAGCAGGTTTGTGTTTTGAAATTTAACGAAGA
ATGCCAGATCGAGTGATCACAAATGTTTAACCAAAAATTAAACATATAAA
TATCTATAAAGATATCTGTAAAATTCCCCAAGGTAAATGAAAGAATCTTT
GTTTCAACAACCAAATTATTTTTGCCAAAGATGTCTACCTCCTGACTCTT
GCAGGGCAAAAAATTTCGCAAAAATAAGTTCCCCTCTTCTTGAATTGAAT
AATTTTTTACCTTCTTAATCTTGAAAGAACACTACAAAATTAAAACCTGG
GAGTTTCTAAACATTAACTAGAAATGGCGACCAGATNNNNNNNNNNNNNN
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ATTTTTTCTTCTGTCTTTCAAATCCACAGTAGACAAAGGCTTGTTTGCGC
TGTTTTCGATCTACGTAAGAAAAAATAACCGATATTCGACTATATTTTGG
AAAAAATTCAATTATATTTTGGAATCAAAAGGATTAATTAATCGAATCAT
AAGATTAAATAGTCGAACCGAGGGGACTAAATAATCGAACTGAGGGGACT
AAATAATCGAACTGAGGTGACTAAATAATCGAATTTCGATTGTTAAATAA
TCGAAGTACTTCGATTATTTAAGCGAATTTTTCGCTTAAATTCGATTATT
TAAGCGAATTTATTTTTGAGAAGATCCCCATAGAAATGGACCCAAATTTC
TTTGAAGTGATAGTATTCTGTGAATTCTCCTGGGAAAACAAAATCATTTG
AGTCTGGGATTTGTTTACATCCACCATTATGGAAATGAAATCTCTGTTAA
AATGCTACTATTTCCATCCAATACGTCATAATTGACTAAATATTTTTTAT
ATATGTTATATTAAACAAAGAATATGAATTTACAATCCTTTAATTTAGAA
ATACTAGTTAATTATAGCAAAAATTCTATTCCACTCAACAATTCTTTATA
GCCCATATCCATTCTCAAGACTCAAAAAAATAATTGGATTTTGGCATGAA
ATATTATATATATTTTAAAACTGGCCTCAATTCAAAAATTGTTGTCCCAG
AGACATCTTATACCTAAATAGTTTTCAGCCCTGGAGTATTTACAGGCCAA
TATGTGTCATCACAAGCGATTTGAAGTACAAATAAAACGGAGCGTTCTTG
AGACGTTCCTGAACGTTCACGAACGTTCCATGGCGTTCCTAGAACGTTCC
AGAACGCTCGAGAACGTCCCGGAACGCTCGCGAACGATCTTTTGAGTCCA
AAGGTTAATATTGACTCAATAAGAACGTTATGGAACGTTTGAGAACGTTC
GAGAACGTTATGGAACGTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGGGAATGACCAG
GAATGTTTAAGAACGTTCTCTAGCGTTCTTAGAACGTTCCTAAAAGTTCA
AGAACGTTCCATATCGTTCGTCTTGCTGGAACGTTCCATTTCATTCGTAT
TTAAAGTTGCTTGTGATGACACATATCACTGCAAAAAGATTATGGGCCCA
AAACTATTGCCATTCTAGAAAGGTTTTTAGTAAAAAATTGGGTTTTTGCT
TGAGATGTTGCACTTTAGCCAGTTTAAGCAGGGATTTCATTTCCATAATG
GTGGATGTAAACAAATCTCAAATGATTTTGTTTTCCCAGGAGAATTCACA
GAATACTATCACTTCAAAGAAATTTGGGTCCATGTCTATTGCCATTTCTG
AGCAGTTTTTTTAGTCAAAAATGGAGTTTTTGCTTGAAATGTTGCATTTT
AGCCAGTTTTAGCACATACTTCAATTCCATAATGGCGGACATACCCTTAT
CCTAAACCCAAAGAATTTTGATTTCACTGGAGTATTTCCAGAAGGCTATC
ACTTCAAAAAGATTTTAGGTTCATGCTTATTGCCATTTTTAAGATTTTTC
CAGTCAAAAATGGGATTTTTGCTTGAAATATTGCGTTTTAGCAGGAATTT
CAATTCCAAAATGGTGGATATACCGAATCCCAAACCCAGATGATTTTGAT
TTTCCTGCAGTATTTCCAGAATACTATCACTGCAAGAAAATTCGGGCCCA
TGTCTATTGTCATTTTAGAGATTTTNNATTTCAGTCAGCATTTAAACTCA
GTTTGTAGAAGCTTGCCTTAAAAAATGCTATTTTTTGATAAATATGATTT
TTTTTGCTAAAAAGCGATTTTTGAAGACGTCATTATGATATTTTGAAAAA
AGTGAAAAACTTGAAATTTATTTCGCTTAAAGACTTTATTGAAGACTTCC
ATCTCTGAAAATTTCAGACATGTGATTCAATCAGTTTAAAGTTTATGAAC
TTGCAAAATTGGCCTTAAAAAGCATTTTGCTACCCAAAATTGGCTTAAAA
CGGCTCGTTTAGGGCTCCAATGGGCACAATTTTCAACCCAATATGATTAT
TTTGTTGTTTCTTCATAAAGTTTAGTACAGCAAATGAAAAAAATAAGATT
TGCAATAGTTTTGACATATTTACNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCCTGAAAAGGCCAGA
AAATGCCATTTTTTCCAATTTTTGCCTGTAGTGCGAATCAGTACCCCCAA
GGGGGTTCGGCCAATTTTGGACTTCTGACCTTAAAAATTGCGCAGAATGC
CTCACAATAGGTTAAATTTTCTTAAAAAAGCACTACATCTTGAATTTTCT
GACTTTGACATTTGACGCCCCACCCTAACGTTGAAGAAAGGGAAAAAAAC
TCGATAACCCAAATTTATCTGGTCGCTGGTCGTGGTCGCCGGCCGTGGTC
GTCGGCCGTGGTCGTCGGCCGTGGTCGTCATTTCTGGTCGAAGTTAAGAA
ACTCCCTTAAACCCTGCTTCAATTTTTTATTAATTTTTCAATACAGCAAT
GGAGAAATTTGCCAAGGAGAAAGAGGAAGCTCTGAAGCGAAGGTCTGGAA
ACTTTTTCAAGCTTGATGACACAATTGATACCGGGAGTGATATGGAATTT
CTACCGGTGACATCAGGTAGAGATATCAGACAATCTTTTTTCTTTATTAT
TGATAAAGTGCTTTTAGATACAGCAGAACCCTTACTTAACAAGACTATGT
ATCTGCTGAAATCCTGAAATCTGCTAATAGCTCTTTAACTGATCTGCTGT
CTTGTTTCTGTTTTCGGTTTCGGATTGAAAAGTACGTAATTCGAATGTTT
ACGCATCAAAGTAGTAGTACATTCTCACAGGAATCATACAAGCAATTGGA
TTACTTAGTGTCTAACAGATATGCTTGAATAATACAATTAAGTTCATTAC
ATCCACGGGTATCATTAAGAATCTTATTGTAAAAATAACTTTACAAAATT
AAACGTCTAGAGTCAATTTTTGAAGAGGACGAAGGCTTGAAATTGGTTGG
TGATATGTTGAAAAAAACAAAAGAAATTTTCAATCCACCAGAAGAAGTCG
AAGATAAAAAAGAAAATGTAGCTGGAAAGGATGCTTCAGTTGGCTCTGCA
AGCAAGCTAGATAAAACAAATAAAAAACTGTTCGATTTCATTGGTAAACA
GCGTACTCAACTCACCAAACAATTTGAAGACTTAAGATCATCGACAATGA
AAGAGATGGCTAGGAGTAAGTCTATGTTGAAGACTTTGAGAACTGTGAAG
AAGATTGGTCAAAAGACAGGTGACACCGACGAAGATGGTGAATTGGACAG
CTCCATCAAATCTCTGGAAGAAGGCATTGAAAAGTTTCAGAAACAGATCG
AGTACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTTCAATTTT
TTTCAAAACTTTGGACCAATAGTAAGTCGTTATTAGCGCGCAGTGGTCCT
GATTACCCATTACGCTTTGCGACTGTGAAATGGCCTATTAAGAATCTTAT
TGTAAAAATAACTTTACAAAATTAAACGTCTAGAGTCAATTTTTGAAGAG
GACGAAGGCTTGAAATTGGTTGGTGATATGTTGAAGAAAACAAAAGAAAT
TTTCAATCCACCAGAAGAAGTCGAAGATAAAAAAGAAAATGTAGCTGGAA
AGGACGCTTCAGTTGGCTCTGCAAGCAAGCTAGATAAAACAAATAAAAAA
CTGTTCGATTTCATTGGTAAACAGCGTACTCAACTCACCAAACAATTTGA
AGACTTAAGATCATCGACAATGAAAGAGATGGCTAGGAGTAAGTCTATG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_005665	XLOC_005665	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000102	supercontig	sc0000102:230214..246412 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.7066	13.752	4.30004	2.88618	10.8469	7.25894	17.6207	20.1708	15.2897	14.6571	11.4409	12.4126	9.84565	8.97249	11.2833	9.63498	9.47506	8.80923	7.10754	11.0163	10.0387	10.3881	20.9853	22.1947	10.682	13.3785	15.3563	10.6438	22.31	25.0886

Blast

[Close]

BLAST of TCONS_00010106 vs. Swiss-Prot (Human)
Match: OS9 (Protein OS-9 OS=Homo sapiens GN=OS9 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.137e-33
Identity = 78/245 (31.84%), Postives = 124/245 (50.61%), Query Frame = 3

Query:  150 LNVDEITNLKYGVEISDKPVLFQGNSFYQSPDVMTISSKFGQKYSCNLPVLQLP-ETEDDNEDKKIDPMTIISTIDKSLNDTCLEFNKGWWTYKLCHKKNITQYHVTEQGEVDSKTTELGAYEXXXXXXXXXXXXXXXXHL--YHKADYINGSKCDLTSIYRSTVVQYYCSD-ENLNSNMVIRVEEPATCEYIISVHVKKLCTHPAFXXXXXXXXXXLTCSPILGEKAFKRYQEEQKFIKEENDR 872
            LN++E++ ++YG+EI   PV+  G S  QS DV+ +SSK+ Q+Y C LP   +  + E + E        I   +    +  CL   K WWTY+ C+ ++I QYH+ E  E+  +   LG Y+   DW D+     K   L  YH   Y NGSKCDL    R   V++ C +   ++ + + RV+EP +C Y++++   +LC HP            + C P L  + +  Y + Q   K+  D+
Sbjct:   31 LNLEELSEMRYGIEILPLPVMG-GQS--QSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTYEFCYGRHIQQYHM-EDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAAPQAILCHPSLQPEEYMAYVQRQADSKQYGDK 271

The following BLAST results are available for this feature:

BLAST of TCONS_00010106 vs. Swiss-Prot (Human)

BLAST of TCONS_00010106 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
OS9	6.137e-33	31.84	Protein OS-9 OS=Homo sapiens GN=OS9 PE=1 SV=1	[more]

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TCONS_00010106 (transcript) - C. hemisphaerica