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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010100 ID=TCONS_00010100|Name=TCONS_00010100|organism=Clytia hemisphaerica|type=transcript|length=677bp
GGATGTTATCGAAAATCTGTCAGTGTCATCACAGTTTAGACCTCTCcgaa
caaatcaaaacaaaaatggcggcGAAAAATCGAAagttgaaaacgaaagc
tgcagttccagaaaaatattcttccTCTCCTCAACATGCTTCCACTTCTT
GTCGGCAAAAAGAGAACACAATCAACTATCTCAGAtggtttgttttaatt
tttcttttgctaGCCATTACCCTAACCTTTTCTCATGAGATATTCGGAGT
TATTCATGGCTTTTCTGAGAAATTGAACTCTAAAAAGTGGCCCACCTCGT
CACCACTACAACCACCTGAAACTTCACATGCACATATGGTTGATGTGGGA
GATGATCATCAGGGTTTAAGGGGAGAAAAGTTGACGAATGAGCATGAAAA
CCTTCAGGAAAGTCAAGGAAATGGTCAGAATAAACAGAAAGATTTCGATG
CCACAATTTGTCCTGAAATTTCTATGACTGATGGAGATATCATAAGACTG
GATAAGCGCAATCTTAAAGTAAAAGAATTGGTACACCAAACTAAAGATAG
TTCAGTTCAGGTGTTCATTGTTGATGATTTTCTAACGAAAGAGGAATGCA
ATGGCTTATCTGGTGCCCATGTTAAACATGCCAAAACATCAAATGAGCTG
GGTCCATTGTTATGCTTTTCAGGAGTT Run BLAST on NCBI transcript from alignment at sc0000102:122118..124148- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010100 ID=TCONS_00010100|Name=TCONS_00010100|organism=Clytia hemisphaerica|type=transcript|length=2031bp|location=Sequence derived from alignment at sc0000102:122118..124148- (Clytia hemisphaerica)
GGATGTTATCGAAAATCTGTCAGTGTCATCACAGTTTAGACCTCTCCGAA
CAAATCAAAACAAAAATGGCGGCGAAAAATCGAAAGTTGAAAACGAAAGC
TGCAGTTCCAGAAAAATATTCTTCCTCTCCTCAACATGCTTCCACTTCTT
GTCGGCAAAAAGAGAACACAATCAACTATCTCAGATGGTTTGTTTTAATT
TTTCTTTTGCTAGCCATTACCCTAACCTTTTCTCATGAGATATTCGGAGT
TATTCATGGCTTTTCTGAGAAATTGAACTCTAAAAAGTGGCCCACCTCGT
CACCACTACAACCACCTGAAACTTCACATGCACATATGGTTGATGTGGGA
GATGATCATCAGGGTTTAAGGGGAGAAAAGTTGACGAATGAGCATGAAAA
CCTTCAGGAAAGTCAAGGAAATGGTCAGAATAAACAGAAAGGTAAATAAA
GACACTTTATTTGTTTTGAAATTTTGCTGCTTAGTTTAGATTGGTCAGTC
ATTTGTGATTTGAGGGCTATGCATGTTAGCTTCCACTGATGCAAGTTACC
CGATCTTACGGTATGACGGTCGAGGTCGAGCTACCCTCCTCAGGCCAATA
CCCCAAAAGTAATTACTGCCTCACTCTGAATTATATTCAGCGTACTGTGC
ACATTTCCAGCCTGGCTTCTACATGCTTTTTTTATAAGAAAGGTGTTTTT
TCAATTCATCATAAATATTCTTAAATTTTTGGGGAAAATCATCCTGAAAT
ATTCTTTCTGTATTCTTACCATATTATATTCTATTTTTAGGGCCAATTTC
ATCATAAATATTCTTGTATTTTAAAGTATATTCTTATAAAAAAGCGTGTA
TATGCTTGAGAAAAAGTTCTAGACAAAAGCATTCAAGAAGTATTATTTGC
CCCTCTTAGCTTTTTTTTCGTACATAATTTTATGAAGATCCTCGAGACCC
CTCCCCCCTTTACTTGCAACCCCCCTTAGGATTAGGAAATTCAAGTTTTC
AACATCCCCCATTGTCTAGGTTTCATTAAAATCCAAAATCCTTCCCTAAT
GTAGGGGGGAGGGTACGGTAGAAACTATGGGATCAACAATTATTTGGTAA
TCAAAAGAAGAAAAAAATCGACTTTTACTGTAAAGAAGTACTCAAAAACT
CGCCTAAAGGCTCGGAAAATATTACAAAGAATCTGAACTCAAAAAATATA
TCCCTGTACTCGGTACCGTGCGATAACTAATACTTATTATTATTTGGTAT
CGATATGCTTTATATAAATTTTAATATATGAGGTTGTTTTGACGTTTTAG
AACGCTTTCTGAAAATAAATTTTTTGATTAGATTAATCTTTTTTAATCAT
AGTTTGAGCCTGGGTATCCATATATATAGTGAAGATATGTAATATCTGTC
ATTTTAGAAAGGAATAGTATTGATATATAAATAACTCAAACTGATAAAAA
CGAAAAAAAGTTAAGAATATTTTNNNNNNNNNNNNNNNNNNNNNNGAACA
CCACAACATATATACAAAGTTAATTCTAGACTTCTGGTACACCTTAAAAG
TCGGATACAGTTTGTTTGATACATTTACTTGATTGAAAGCTCAAAACCTT
GAAAACCCAGACAAGGAAACAAAATATGCAGATGATAATCAAGTTAACAG
TAAACATCAATAAAAGGTTTTGATAATATTTTCAGTGATTTACCCTAAAG
TGGTTTTCCAGTTTTTTTTTCAAATCATTTCAAGAATTCATAAAATTTCT
ATGCAAAAGAAAGATGGAGTAATTATCTGAATGTTTTTATCACAGATTTC
GATGCCACAATTTGTCCTGAAATTTCTATGACTGATGGAGATATCATAAG
ACTGGATAAGCGCAATCTTAAAGTAAAAGAATTGGTACACCAAACTAAAG
ATAGTTCAGTTCAGGTGTTCATTGTTGATGATTTTCTAACGAAAGAGGAA
TGCAATGGCTTATCTGGTGCCCATGTTAAACATGCCAAAACATCAAATGA
GCTGGGTCCATTGTTATGCTTTTCAGGAGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010100-exon-sc0000102-1575043694:123708..124148 | TCONS_00010100-exon-sc0000102-1575043694:123708..124148 | Clytia hemisphaerica | exon |
| TCONS_00010100-exon-sc0000102-1575043694:122118..122353 | TCONS_00010100-exon-sc0000102-1575043694:122118..122353 | Clytia hemisphaerica | exon |
| TCONS_00010100-exon-sc0000102-1510915933:123708..124148 | TCONS_00010100-exon-sc0000102-1510915933:123708..124148 | Clytia hemisphaerica | exon |
| TCONS_00010100-exon-sc0000102-1510915933:122118..122353 | TCONS_00010100-exon-sc0000102-1510915933:122118..122353 | Clytia hemisphaerica | exon |
| TCONS_00010100-exon-sc0000102-1491911889:123708..124148 | TCONS_00010100-exon-sc0000102-1491911889:123708..124148 | Clytia hemisphaerica | exon |
| TCONS_00010100-exon-sc0000102-1491911889:122118..122353 | TCONS_00010100-exon-sc0000102-1491911889:122118..122353 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102 | supercontig | sc0000102:122118..124148 - |
Blast
The following BLAST results are available for this feature:
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