TCONS_00010001 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010001
Unique NameTCONS_00010001
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1857

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010001 ID=TCONS_00010001|Name=TCONS_00010001|organism=Clytia hemisphaerica|type=transcript|length=1857bp
CAAAAATGTAAACACAGACTTTCCCTTTAAATTCTTGAGCAGGGCTAAAa
cttcaaaatcattttttagacgAGCAAATCCAGACGAGTTGAACTTTTAT
AGCAAAGAAGAGAAATTGTTTTTGACCAAGATGAGAGAACAATTAAACGA
AGAGGGAATCATTACACTGAAGATAAATTTTGATAACAGCAATGGGAGAA
GAGTGGAAAATACACAACAGCATGGGCAACATGACGATGatcaaactttt
tcttcaaacaagGAGGGTGTACTTCTCAGTCGTGTTTTGAACTTAGTAAA
TGAATTTCCTTGGCCTAAAAGTAACGTTTCTGTACATTATACCACAAAGA
CTTCTGAAGATAGAAATGGCAACTCCTTGATAATGAAAGAACCAGAAAAT
ATAAAAGCAAGAGTGACAGATTTACCAGTACCTGTGTTGTTGAAAATCTT
CTCAATGTTAGATGTGATATCATTATGTCGTGTTTCAAAGACCTGTCAAT
CATGGTATAAAATAGCAAATGATGAGTTATTATGGCAAAAGAAGCTAGAT
TGTGATTCACATAGATGGGAAATGGTTGACCATTTATCACATCCTCAAAC
ACATTTCGAAATGAACCCTGAATCAACATTTAAAGAAAtatATCTGCAAT
GTTGTCCTGAATGTCGAACCAAACGAGAAAAAACTTCTATGCTACCAAGC
CTACCAAAACTTGGATTttattttgggttttcaaaTCCAAAAGTTGCAAT
GTTTGGCTCAGGGCTTGATCGAAATGGTTTTGTCAAAAAGCTTTTGTGGG
ATAAACATTCACCCTTTGTTGTTCAGAAAATGTTCCCCGGTCAATTAGAA
GGCCTTGGTTCTGGGTTCACCTTATCATATTCAAGTGGATCAATCGACCT
CACAACATTATATAGAATGTCAAAAGCTGAGCgtgaaaatgaccaaaacc
CAAATGAAAGAGTGAGTAAGCTTTTGATAGCAGACACAGAGAACGAAGGA
CAGTTGACGTTATCACACCCTGCAAGACAGTTGTGCTCCACCATTGATGC
CTTTGTTTATGTCGTCAAAGCAGATGATATTGATAAAGTCTGTTTTGGAA
GTGATGAATTAAAAGCGATGCTTGATGAAAGATGGAGTCAACCAAAGGTC
CCTCTCCTCGTGTTATGCTTGAAGTCAGATACCACCGTTCAAGCAGTACC
TTCAATAACAGTAGCTGATCAATTGAACTTGAGAAGTTTATCTCGACCCT
GGCAGgtcAGACAGTGTGATGTTCGTTCTATGAATGGTATCCTACCTGGA
GTACATTGGTTCACAAAACGTATAATGTCATCTTAGAAGAAGGGACTGTA
CGGGGATTGCCGTAAATAACACCGACACATTTTTCTTCAATCACAGTTAA
CACCGACaacaaaaatcgctaaaatccttattttgtcaCCGCTTTGCACG
TATGGCACCGAATATATCGTCACCTTTTTATCCATACATCGGAACACCAA
TAGtaataccgtcacaccgtcaaacTCTTATGCTTCCCTAAAGAACATTC
GACATATGCGCTTTCTTGCGTCGAAAGAGCTTATTGTGTATTGATTGATT
GTGGGCATTGGTTCGTGAAATAGCCAGTACCTTTCCAAACATATTGTCTC
CTCAACATTCAATCGTTCCAATGTTTATTGGGGCCAACAGTCCACGAAAC
TTAATATGTTTTCTCGAAATAAAAAGTCTCGTTTCAACGACTCACGATTT
AAGAAGAGtcttaagggctacatacactacacaatatattgtcaggcaat
atattgatgatatattgctgaatgtcgacaatatattgaaaaggtgtccg
caatata
Run BLAST on NCBI

protein sequence of TCONS_00010001-protein

>TCONS_00010001-protein ID=TCONS_00010001-protein|Name=TCONS_00010001-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
KNVNTDFPFKFLSRAKTSKSFFRRANPDELNFYSKEEKLFLTKMREQLNE
EGIITLKINFDNSNGRRVENTQQHGQHDDDQTFSSNKEGVLLSRVLNLVN
EFPWPKSNVSVHYTTKTSEDRNGNSLIMKEPENIKARVTDLPVPVLLKIF
SMLDVISLCRVSKTCQSWYKIANDELLWQKKLDCDSHRWEMVDHLSHPQT
HFEMNPESTFKEIYLQCCPECRTKREKTSMLPSLPKLGFYFGFSNPKVAM
FGSGLDRNGFVKKLLWDKHSPFVVQKMFPGQLEGLGSGFTLSYSSGSIDL
TTLYRMSKAERENDQNPNERVSKLLIADTENEGQLTLSHPARQLCSTIDA
FVYVVKADDIDKVCFGSDELKAMLDERWSQPKVPLLVLCLKSDTTVQAVP
SITVADQLNLRSLSRPWQVRQCDVRSMNGILPGVHWFTKRIMSS
Run BLAST on NCBI

transcript from alignment at sc0000101:72051..82437-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010001 ID=TCONS_00010001|Name=TCONS_00010001|organism=Clytia hemisphaerica|type=transcript|length=10387bp|location=Sequence derived from alignment at sc0000101:72051..82437- (Clytia hemisphaerica)
CAAAAATGTAAACACAGACTTTCCCTTTAAATTCTTGAGCAGGGCTAAAA
CTTCAAAATCATTTTTTAGACGAGCAAATCCAGACGAGTTGAACTTTTAT
AGCAAAGAAGAGAAATTGTTTTTGACCAAGATGAGAGAACAATTAAACGA
AGAGGGAATCATTACACTGAAGATAAATTTTGATAACAGCAATGGGAGAA
GAGTGGAAAATACACAACAGCATGGGCAACATGACGATGATCAAACTTTT
TCTTCAAACAAGGAGGGTGTACTTCTCAGTCGTGTTTTGAACTTAGTAAA
TGAATTTCCTTGGCCTAAAAGTAACGTTTCTGTACATTATACCACAAAGA
CTTCTGAAGATAGAAATGGCAACTCCTTGATAATGAAAGAACCAGAAAAT
ATAAAAGCAAGAGTGACAGATTTACCAGTGAGTTTGTTCAGTTTTGTTTT
GATTTTTTGATTCGACGCACTGGACTTACAAAAAAGCACTGAAAACGAAA
TGTTTTGTGTCAAATAGGGAATTTTTTTTTCCACCCGACAATTCAATTAC
CGTGAGTGGTCCTAAATCCGACAGCCCTGTCTAAATCCGATGGGGTCTTT
CAAAGATACAAACTAAAATAAAAACAAACCTTTCACTGTGACGCAATAAA
GATACCAAAGTGTCAACTAAACTGAGAGATTTGATAAACATTGATTTGAA
CCAAATTACAATAATTGCTTCTTGTACAAAACATTAAGCAGATATTCAAT
AACCAACACGTAAAACCTATTGAATATACGTTTTATTCTATACTTAAAGG
CAAAAACAAAAGAAAAACTTGGAACATTTTTTACAAAATAAAAAGTCCAG
ACGTAATTAATCGAACCAATCGAATGGTATTTTTAATCGAACTTTGCCGA
ACTTACTCGAACTTTGTTGGCTGATTAATGTTCGACTAAGTTTGGTTGTC
GAACTTTAGTCGAATACTCACAAATTTCTCAAAATACAAAGTTCGATTAA
GTTTGATTACTGAAATCGAACTTAATCGAACTTTTTTTACAGAGACCTCG
ACAATTTGATTACATTTGATCGAACTTAATCGAACTAATCGAACTTAATC
AAACTTTGTCAAGTTTAATCGAACAAAAATTTGAGAAAACCCGAGCAACT
GAAGGCCGCTCCACTTGCGCGTATTTCGATCGCACTTTTTGCAGCAAAAG
ACAACACACGATAATTTCCAATAAATAAAACGTTGGTTTCGTTACGGTTT
TTGCTATTTTTTTATNGGACACTTTGAGGAACTTTGAAGCGCCCTCGCTG
GTGCAGACGTGTACCCTTGCATCCCCCTGACCAGTGGGCACCGATCAAAC
TCCTCGGAACCCCGGCCGGGACCCCCAGGGGCCGTCCACGGTAGTACCCA
AAGGAGGACATTTTTTGTGCCGAACTTTTTCGAACAGAGTTTTTTGTCGA
ATTTGTCGAACCTTTCTTGTTGTCGAACTTTATTATCGAACAGAGTTTTT
TGTCAAATTTGTCGAAAATTTCTCGTTGTCGAACTTTGTCAAACTTTATA
TGTTTTGTCAAACTTAATCGAATACTCACAATTTTAGCGACTTTTAAAAA
GTTCGATTAAAGAATCTAATCGAACTTTTGTTGTTCGATTAAGTTCGACA
AAGTTCGATTAGTTCGGTAATCAAACTGTTCGATTAATTACGTCTGGAAA
AGTGCTCACAAAATTGAATGTTCGAAATTTTTCTCTTCATCAACTTTTTA
ATTACTTTAAAGTCATTAAAAATGCAAAGTGAAATTGACAATAGAACTAT
TTTAAAAGTTTCTTTTCTAGCAAGAGTAAAAACATGCAAAAATCCATGAC
ATCTCAAAAAAATTTGAATAAAAAAATAGCCATGTGATAATAGTGTGGTC
TCAGTGCAGCACACTTGACAAGGTTTGGAACGAAGAATGAATTCGATTGA
CGTGAATGTCTTTAGCGTTCAAACTGAATGAAAATAAATTAAGACTAATA
AATATTTGATTGACAAAATTAAAGTAGAAATTAAATAGATGACAATAAGA
CTTGAATAAATTGACCTAACTTAAATTAATCGTATTTTTAGAAGATGAAA
ATCAGAAATAAACATAATTTAGATAAAACTAGCCTAACTATCCTAACCTT
AGTGGTCACTGACAAAGAAGTGAGAAGCCTGTGCCAAAAGGGCAGATGTG
AAATCTAGCAAAGTTGAGCCAACTGAAGTTCACAAAAGAAAACAGAAAAG
GACAAAAGCTTACCGGCTGGCCCAATGTGAATTACTGTGATGAGTGACCA
GGTTGTGTATAACCAACTGGGTTAAACACATGAAAATGACTGAAAAGTCT
GAGTGAAATATCAACACTCAACCAACATGCAAAATAGTAAAATTTGATAT
GAAAGTTCTCTTCACAACCTTACTGTAAAAGCTCTCAACATTGAATGAAA
ATTGAATGCAATAAATGAGAAAAAACTGAGGAGAAAATTGCTCCCTAATT
ATAAAGTCATTAAAGTGAGAAAAAGTATCTAGAGTAATTATAAAACAAAA
GAAAATAAATCTAAAGTGTGAATGACATATAAATTAATTGACAGTAAAAT
TAAACAAACAAATGAAATTTTTAATTGATTTTTAAGTTTTATATTTTTTT
TGTAGGAACACTTTCTGTATTCAAGTGTTCACATGACAAATAGCCATGTG
ATATCGTTAATTATCAAACGGCTGTTTTTGCCTACAGGTATAGAATAAAA
TTTTTTATTACAAAATTGTTAACGTTTTAAACACGAACAACAGATTCAGA
ATAATAGTAGAGGTAATTATTTTTACAACTCGCACTTTTTTGATCACATT
AATTGACATCTTGACATTATAAAGTCCTTGCAATAGTTTATCATTCAACT
TGGAGAAGGAATGTTTGTAAACATAGAATTTTTTCATAACAGTTATTTAG
GGTGTCGGAATTAGGCAGGGCTGTCGGATTTGGGACCACTCACGGTATTG
TACAAGTTGTAAATCAGTCTGGTGTGCCCAACGTGTTGTGTGATACAATG
CTAAAGAAAAAGTTGGACATTAAAAGAATTTGCATATTGTAAAATACTGG
CACTACACCTTTCCCTTAATTCATACTTCTCAGAAATGGCCTGGAAAAAT
GTGCCTTCACCGTTGTGTATAAACAAACGCGTCTTTGCGTGCAAGGGGTT
AGGGAAAGTGGGTTTTTCAGCTTCTAACTTTTGATAGCAATCTTCTTTTG
GCAAAAGATTTTCAGGGTGGTATAATATCTCTATTTGGTTGAGTCGTGCA
CAGGAGGCTTTGAGACCCATTTTCCCAACTATAGACGCTTTCAATTAACT
GATAGTCATATCTTGACACAGGACTTTATTATCAAAATGAACCTTGAACC
TGACTACCCAATTCTCCTGGCATGGGTTGACCCAGGCAAAGGTTCATTCA
CCACTTGCCAAGTGAACCGCTGCGAGTGAGAATTGAACCTTGGTCGCCTG
TACAGCAACCAAGGTCAATGACCACTATACCACAGCGCCCCCTAATATCA
TGAGTAGATTGAACATACTAAAATTTGAGGGGATTATGTTTGACAGAACT
TAAGAAGAGCTCAAAAACTAACTTTCCCTAAGGAAACGCGGTCAAAAACA
GGTTTGTTTACTTCCAGAGACCAAACAGTGGAGAGCATAAAAATTAATCA
GTTAATTAAAAACTTCAGCATAACTTGCAATAGCTCCACCTTTCAATGGA
ACTTTGGTTATTTGTTGTTGTATGGTGTAGATGCTCTGTTCTGAAGGTCC
ACAAAACTGAATTTGGGTCTCCTTTAAGTTTTTGTGTATTCTTAATATAA
TATACACCTTTGATGATATAATAGTTGTTAGGGAGAACGCAGCAGTCTAT
TACATAACTAATTACTCCACACTTCAGTAGATGCAAGTATAACAAGCAGG
AAATTAGATATTACTTAGAAATAAGTTTTATTAAAATTGGCACGCTAACA
TTCTTGTGAATTAGCACGCAATATCGCAAATGTTCCTGCACGACAACATA
TAAAGTATTAGCTCAAGTATTAAGGGCTTTATATTGGTAATATGAGCATA
TCATTTTTGTCCCTAATCGATGGAGTAATTTATTATGGGGAACTGAGTCA
ATAGGTTGTCGCATTCTCCCAAACATGTTAACAACACTGGCAGAATAGAG
TTGATTATTTTTCATGTGATACAGTAATATTGATAATAAATAATTGTTAT
GGGATAATATAAGTTTGTCCACGCAAGAGCGTCTCTATCAGAGTGTATAT
CTCACCTTTATCACTCCGTAGTATATATACACTCTGTGTGCATTGCCTGT
TTGATAAAAAGATTCCTATACCTCTGCAATGATGTATGATTTATAAATAG
CAACACTTCTCTTGTAGACGACTCACCTGCACTCCATCGCATCAGTTGGT
TTGAAAAATCTCAAATCAGAAAAGAGAATTAGAACAGACCCTCTACAGCA
ATGAATCTGGTTCTGTGTACAGAGTACATAAAATGTTAATAGACCAGGGT
GCTTCTATCGTGCAGGAATTTGGAATAATAATTGAATCTTAATTAACCCT
TTGGAAAATATATTCATTTTGATTCTACAAATTTATCAAGTCAAAAAAAG
AAGTTAAAAGCATCTTTCTAAAAAAGGGCAGTGTTTCTGAAATATTATCT
GCTGAAAAAGAGAAAATAAATGGGCTTTATAGGTATATTTTTATAAACAT
AATATTGTTCTCTTGAGTGTTTCGGGAAATTAATGCCTAATATGGAGATT
TTATGAGATTTTGATAATAAAGTCCTGTGTCAAGATATGACTACCAGTTA
AAAAATCTTTGTGTGTCTATGTCTAGTTTCTCTCTTTAACATAACACATC
AATTAACACCTAAATGGTTACAATGAAACAGACGCAATGGGGATGGGAAA
GATCTTTTTTCATGAACATCTATTCTCTTTCAAACAAATAAAAGGACATC
AAAGGTTTTGCTTTTAGATTAAGTTGATATCATTGGCTCACAGTACTCAT
CGATTTTTCACATTGCATTGACATGAATGTGGAGAAAGATTGGTCATGAA
GAGAAGCAAAGCATTTTTTTGTTTATTCAGCACTAAATTGAATACAATAT
AACAATAAGAGACACCAGCCTGATATAAAACATGTGTCTGATATGATGCT
GAAGCACTTTTGAAACAAAAAACCTTAATGATCGCATTAAAATATGCAAA
CAGAAATTTTTTACATATACACAAAAACATTTTAATTCTACTTGTAGTCG
TGTTTTGTAACAGGAATTTTTTTATCAGACACCCTGTATAAAGTTGATGA
ATGGACAAGGATGTTTGATTTCCTATGATCGCGATAACTTTTACCTTTAG
GTACCTGTGTTGTTGAAAATCTTCTCAATGTTAGATGTGATATCATTATG
TCGTGTTTCAAAGACCTGTCAATCATGGTATAAAATAGCAAATGATGAGT
TATTATGGCAAAAGAAGCTAGATTGTGATTCACATAGATGGGAAATGGTT
GACCATTTATCACATCCTCAAACACATTTCGAAATGAACCCTGAATCAAC
ATTTAAAGAAATGTAAGTTTTGAATTTTGAAATTAAACACTAGGGACGAA
TACAAAAGTCATGCGTTGGCATTAAAATTTTAATTGTTTATAATTGTTTT
ATTCATCTCTTGAGACTTTTCATTTTATGTCTCAACAGATACGGTTTTCT
AGGGAAAAAAATGTTTTCTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTTTTTATT
GATTTTAGACCTGAGGATGATCGTAAGATCGAAATATATATAGTCACAAA
AATAAAATGTCACCATTGTTGGTTCATTTTGAATATCTTCTTTGAATTTT
TAACATGAAATTTTTCAAATTATTATCTAAAGGGCTTATTTACTTGCTGT
GAAAGCTTATAATCGGATTAACTTTTTGCAAGCTGTAATTCTGTAATTCC
CTTTTTTCCTTTTTCAGATATCTGCAATGTTGTCCTGAATGTCGAACCAA
ACGAGAAAAAACTTCTATGCTACCAAGCCTACCAAAACTTGGATTTTATT
TTGGGTTTTCAAATCCAAAAGTTGCAATGTTTGGCTCAGGGCTTGATCGA
AATGGTTTTGTCAAAAAGCTTTTGTGGGATAAACATTCACCCTTTGTTGT
TCAGAAAATGTTCCCCGGTCAATTAGAAGGTATACTTTGTTTTATGTTTA
AAGCGACTGGAGTCATATATAATGTGTAATACAATAATATATATAGTGTC
GAAGTCAAATGCCTTCAACTACTTCAAAAAATGGCAACACCAAAGAGAAA
AACTCACAAAACAAATATATACAAACATATGCGAATAAATAGAATTTCTG
TCCAACTATATTCACTCAGCAGATTTGGGTATATATGTTCAATGATACGA
AAGTTGTTTCGGTTATTATTAGTTTGTAGATAAATCTCACGTAAATTTAC
TAGTGGAACTTCGAGGAAACTAACATTAAATTTCAATACTTAAAACAAAT
CAATGATCGATTAATGCATAATTTTGTCATTAAAAATGGAGTTATATGTT
ATTGTTCAAACTGCGGTGAGCAATGCATAATCATTAATCTTGGACAGATT
CTGATTTTTTCGCACTGGTATGTGTACACTCTATATAAAAGTCAAGGCTT
CGTATTAATATACACGTTTTTTTTTTATAAGAACGTCAAAATTTTTCGAA
GCCTTCGGATGTTCTCAGTTTTTTGGATTTGAAGCCTAAAAATGTTCTTA
AAATGTTCTTATTTTCAGCATTTTTTGAGCATTTTGATGTAATTTCTTAA
GAAAATGCATGTTTTTAAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAACGTGTATCATA
TGTTTGTTGTTTAGGCCTTGGTTCTGGGTTCACCTTATCATATTCAAGTG
GATCAATCGACCTCACAACATTATATAGAATGTCAAAGTAAGAAAAACAC
CTTGTTGAAAGTTTTGAAAGATAATAAGGATTCAAATTTTCGATTCAGTG
GCTTTGTAGATTTGAGAACGTTTCTAACGTTAATCCCGGACTAAAAAAAT
ATATATATCTAAATCATTGGTTATTGTGCTACATAGAGTATATATAAGTT
GGAAATGATTTGATTATCTCCAGAATTTTATTTCACAAATGAAGAATTTT
TGTCTTCTTTTTTAGGGGACTATCCCACGTATACAGTATAACAACGAATT
TTGAATTCTTTTTTCGTAGATTTCGCGTCTATACAGGCAAAACCATACCA
GTCAAGTTAAAAAACAATATCTTCCTCATTTTTTCCTAAACTAACCTTTC
ATTATTTTGTACTTCTTTTAGAGCTGAGCGTGAAAATGACCAAAACCCAA
ATGAAAGAGTGAGTAAGCTTTTGATAGCAGACACAGAGAACGAAGGACAG
TTGACGTTATCACACCCTGCAAGACAGTTGTGCTCCACCATTGATGCCTT
TGTTTATGTCGTCAAAGCAGATGATATTGATAAAGGTTTGGTTTTTGTAT
CCCATTTTTATTTGATTTCTCATCAACATTACTTTTATCACTTTCTTTAT
AACTTCTCAAACTCGAAGCCAGGCCCTTATTTCGCTACGTTATATTTCTG
ATAGTGCTCACATATATCAACACGTTTTTCAGTAAAATACAAAGCTTGAC
TTTAGGGACGAGATGGATAACTTCCTTATCTCTATTGTCTAGGAAAAGTT
TTCGATTATTTTTTAAATGTTTAAATATTTCTCAGAAGAAACTCTCCTGC
CTGTGTTGTATCAGTGTATATGTAGATTTGTCCAGCATAGCTATGTTACA
TGCAAGCAAGCTCAGTCCTCAGTCTAGGCTTTTCAAATCTTTGTTTTGTT
ATAAGACAAATTTATCAATTTATCCTTCGACGGGAAGACCTTAAGGAAAA
TATTGGTCGGTCGGTATAATAAAAATAAATTTCTTAAAATCAGGCCAGAA
AATCAGAATTTTAAGAATTTGTGACGTTTTGAAGCAGTACACTTCTTCTT
TATCGATGAGCGACTTTCTTGCCATTTTATTGTGATATTTTAAGTTCTGG
GAATGAGTTTACACTTTTTCAAACTTATCTGCTCAAAAAAGTCAATCCTC
CAGCTTGCAAATTCAATATCCTTTTTGTTTTTTCAAAAAAAAAAATTGGA
ATAAAACAGGGTAGAACAACAAATTAATTTGGTCCCGCCTAATGAAACTT
CTTTTCTTTTTTTTATTAACAGTCTGTTTTGGAAGTGATGAATTAAAAGC
GATGCTTGATGAAAGATGGAGTCAACCAAAGGTCCCTCTCCTCGTGTTAT
GCTTGAAGTCAGATACCACCGTTCAAGCAGTACCTTCAATAACAGTAGCT
GATCAATTGAACTTGAGAAGTTTATCTCGACCCTGGCAGGTAAGAAAAAA
TTTCATTTAATCGCAATATAGAAACCACTTTTGAACAAGATTTATACGCT
GGAAACATTACATAGAGAGTTGTATTCTTAAAGTTTCGCCACTCATGGAC
GAAAATCATCTGAAAAAAATATTGACTGAAAATCCGTCATCCAGACGGAT
TCGGGTGGCATGGAACTTTAATAACAAGGTCCTTTCCACGTAAGGTAACC
TATGATAGAAATAATTTCGATGACATCATTCATCATGCCTAAATTGAGCA
AAATCGAGAGTTTTGGACTTTTGAGTGAACATTTGGGTTAAAATTACATT
TCTTCCTCAAAGCCTTCATTTTATCTCTAACAAAGGAAGCAGTTTTTTCT
GTTAACCAAATACAAAATGACTGTATTCTTATGAAATTGTGTGAAATTCA
CCCTAGAGGGTATTCTTAGGGTATTCTTACGATTTGGCCAATTTTCACCC
TGATATTCTTATAGAGGATATTCTTATATAAAAAAGCGTGTATGAGAGAG
AACTGCTCATTCTTTTCCAGTAATCTTATAAAAAAATCATAGTTAATTTC
GTGATCAGGTTTTACCGAAGATGTTCAATGTCCTTCAATTAAACTACACC
AAGAAAGTAAAAGTGAAATATTATTTCTTTTTCAGGTCAGACAGTGTGAT
GTTCGTTCTATGAATGGTATCCTACCTGGAGTACATTGGTTCACAAAACG
TATAATGTCATCTTAGAAGAAGGGACTGTACGGGGATTGCCGTAAATAAC
ACCGACACATTTTTCTTCAATCACAGTTAACACCGACAACAAAAATCGCT
AAAATCCTTATTTTGTCACCGCTTTGCACGTATGGCACCGAATATATCGT
CACCTTTTTATCCATACATCGGAACACCAATAGTAATACCGTCACACCGT
CAAACTCTTATGCTTCCCTAAAGAACATTCGACATATGCGCTTTCTTGCG
TCGAAAGAGCTTATTGTGTATTGATTGATTGTGGGCATTGGTTCGTGAAA
TAGCCAGTACCTTTCCAAACATATTGTCTCCTCAACATTCAATCGTTCCA
ATGTTTATTGGGGCCAACAGTCCACGAAACTTAATATGTTTTCTCGAAAT
AAAAAGTCTCGTTTCAACGACTCACGATTTAAGAAGAGTCTTAAGGGCTA
CATACACTACACAATATATTGTCAGGCAATATATTGATGATATATTGCTG
AATGTCGACAATATATTGAAAAGGTGTCCGCAATATA

Coding sequence (CDS) from alignment at sc0000101:72051..82437-

>TCONS_00010001 ID=TCONS_00010001|Name=TCONS_00010001|organism=Clytia hemisphaerica|type=CDS|length=9345bp|location=Sequence derived from alignment at sc0000101:72051..82437- (Clytia hemisphaerica)
GTCAGACAGTGTGATGTTCGTTCTATGAATGGTATCCTACCTGGAGTACA
TTGGTTCACAAAACGTATAATGTCATCTTAGTCTGTTTTGGAAGTGATGA
ATTAAAAGCGATGCTTGATGAAAGATGGAGTCAACCAAAGGTCCCTCTCC
TCGTGTTATGCTTGAAGTCAGATACCACCGTTCAAGCAGTACCTTCAATA
ACAGTAGCTGATCAATTGAACTTGAGAAGTTTATCTCGACCCTGGCAGAG
CTGAGCGTGAAAATGACCAAAACCCAAATGAAAGAGTGAGTAAGCTTTTG
ATAGCAGACACAGAGAACGAAGGACAGTTGACGTTATCACACCCTGCAAG
ACAGTTGTGCTCCACCATTGATGCCTTTGTTTATGTCGTCAAAGCAGATG
ATATTGATAAAGGCCTTGGTTCTGGGTTCACCTTATCATATTCAAGTGGA
TCAATCGACCTCACAACATTATATAGAATGTCAAAATATCTGCAATGTTG
TCCTGAATGTCGAACCAAACGAGAAAAAACTTCTATGCTACCAAGCCTAC
CAAAACTTGGATTTTATTTTGGGTTTTCAAATCCAAAAGTTGCAATGTTT
GGCTCAGGGCTTGATCGAAATGGTTTTGTCAAAAAGCTTTTGTGGGATAA
ACATTCACCCTTTGTTGTTCAGAAAATGTTCCCCGGTCAATTAGAAGGTA
CCTGTGTTGTTGAAAATCTTCTCAATGTTAGATGTGATATCATTATGTCG
TGTTTCAAAGACCTGTCAATCATGGTATAAAATAGCAAATGATGAGTTAT
TATGGCAAAAGAAGCTAGATTGTGATTCACATAGATGGGAAATGGTTGAC
CATTTATCACATCCTCAAACACATTTCGAAATGAACCCTGAATCAACATT
TAAAGAAATAAAAATGTAAACACAGACTTTCCCTTTAAATTCTTGAGCAG
GGCTAAAACTTCAAAATCATTTTTTAGACGAGCAAATCCAGACGAGTTGA
ACTTTTATAGCAAAGAAGAGAAATTGTTTTTGACCAAGATGAGAGAACAA
TTAAACGAAGAGGGAATCATTACACTGAAGATAAATTTTGATAACAGCAA
TGGGAGAAGAGTGGAAAATACACAACAGCATGGGCAACATGACGATGATC
AAACTTTTTCTTCAAACAAGGAGGGTGTACTTCTCAGTCGTGTTTTGAAC
TTAGTAAATGAATTTCCTTGGCCTAAAAGTAACGTTTCTGTACATTATAC
CACAAAGACTTCTGAAGATAGAAATGGCAACTCCTTGATAATGAAAGAAC
CAGAAAATATAAAAGCAAGAGTGACAGATTTACCAGTCAGACAGTGTGAT
GTTCGTTCTATGAATGGTATCCTACCTGGAGTACATTGGTTCACAAAACG
TATAATGTCATCTTAGTCTGTTTTGGAAGTGATGAATTAAAAGCGATGCT
TGATGAAAGATGGAGTCAACCAAAGGTCCCTCTCCTCGTGTTATGCTTGA
AGTCAGATACCACCGTTCAAGCAGTACCTTCAATAACAGTAGCTGATCAA
TTGAACTTGAGAAGTTTATCTCGACCCTGGCAGAGCTGAGCGTGAAAATG
ACCAAAACCCAAATGAAAGAGTGAGTAAGCTTTTGATAGCAGACACAGAG
AACGAAGGACAGTTGACGTTATCACACCCTGCAAGACAGTTGTGCTCCAC
CATTGATGCCTTTGTTTATGTCGTCAAAGCAGATGATATTGATAAAGGCC
TTGGTTCTGGGTTCACCTTATCATATTCAAGTGGATCAATCGACCTCACA
ACATTATATAGAATGTCAAAATATCTGCAATGTTGTCCTGAATGTCGAAC
CAAACGAGAAAAAACTTCTATGCTACCAAGCCTACCAAAACTTGGATTTT
ATTTTGGGTTTTCAAATCCAAAAGTTGCAATGTTTGGCTCAGGGCTTGAT
CGAAATGGTTTTGTCAAAAAGCTTTTGTGGGATAAACATTCACCCTTTGT
TGTTCAGAAAATGTTCCCCGGTCAATTAGAAGGTACCTGTGTTGTTGAAA
ATCTTCTCAATGTTAGATGTGATATCATTATGTCGTGTTTCAAAGACCTG
TCAATCATGGTATAAAATAGCAAATGATGAGTTATTATGGCAAAAGAAGC
TAGATTGTGATTCACATAGATGGGAAATGGTTGACCATTTATCACATCCT
CAAACACATTTCGAAATGAACCCTGAATCAACATTTAAAGAAATAAAAAT
GTAAACACAGACTTTCCCTTTAAATTCTTGAGCAGGGCTAAAACTTCAAA
ATCATTTTTTAGACGAGCAAATCCAGACGAGTTGAACTTTTATAGCAAAG
AAGAGAAATTGTTTTTGACCAAGATGAGAGAACAATTAAACGAAGAGGGA
ATCATTACACTGAAGATAAATTTTGATAACAGCAATGGGAGAAGAGTGGA
AAATACACAACAGCATGGGCAACATGACGATGATCAAACTTTTTCTTCAA
ACAAGGAGGGTGTACTTCTCAGTCGTGTTTTGAACTTAGTAAATGAATTT
CCTTGGCCTAAAAGTAACGTTTCTGTACATTATACCACAAAGACTTCTGA
AGATAGAAATGGCAACTCCTTGATAATGAAAGAACCAGAAAATATAAAAG
CAAGAGTGACAGATTTACCAGTCAGACAGTGTGATGTTCGTTCTATGAAT
GGTATCCTACCTGGAGTACATTGGTTCACAAAACGTATAATGTCATCTTA
GTCTGTTTTGGAAGTGATGAATTAAAAGCGATGCTTGATGAAAGATGGAG
TCAACCAAAGGTCCCTCTCCTCGTGTTATGCTTGAAGTCAGATACCACCG
TTCAAGCAGTACCTTCAATAACAGTAGCTGATCAATTGAACTTGAGAAGT
TTATCTCGACCCTGGCAGAGCTGAGCGTGAAAATGACCAAAACCCAAATG
AAAGAGTGAGTAAGCTTTTGATAGCAGACACAGAGAACGAAGGACAGTTG
ACGTTATCACACCCTGCAAGACAGTTGTGCTCCACCATTGATGCCTTTGT
TTATGTCGTCAAAGCAGATGATATTGATAAAGGCCTTGGTTCTGGGTTCA
CCTTATCATATTCAAGTGGATCAATCGACCTCACAACATTATATAGAATG
TCAAAATATCTGCAATGTTGTCCTGAATGTCGAACCAAACGAGAAAAAAC
TTCTATGCTACCAAGCCTACCAAAACTTGGATTTTATTTTGGGTTTTCAA
ATCCAAAAGTTGCAATGTTTGGCTCAGGGCTTGATCGAAATGGTTTTGTC
AAAAAGCTTTTGTGGGATAAACATTCACCCTTTGTTGTTCAGAAAATGTT
CCCCGGTCAATTAGAAGGTACCTGTGTTGTTGAAAATCTTCTCAATGTTA
GATGTGATATCATTATGTCGTGTTTCAAAGACCTGTCAATCATGGTATAA
AATAGCAAATGATGAGTTATTATGGCAAAAGAAGCTAGATTGTGATTCAC
ATAGATGGGAAATGGTTGACCATTTATCACATCCTCAAACACATTTCGAA
ATGAACCCTGAATCAACATTTAAAGAAATAAAAATGTAAACACAGACTTT
CCCTTTAAATTCTTGAGCAGGGCTAAAACTTCAAAATCATTTTTTAGACG
AGCAAATCCAGACGAGTTGAACTTTTATAGCAAAGAAGAGAAATTGTTTT
TGACCAAGATGAGAGAACAATTAAACGAAGAGGGAATCATTACACTGAAG
ATAAATTTTGATAACAGCAATGGGAGAAGAGTGGAAAATACACAACAGCA
TGGGCAACATGACGATGATCAAACTTTTTCTTCAAACAAGGAGGGTGTAC
TTCTCAGTCGTGTTTTGAACTTAGTAAATGAATTTCCTTGGCCTAAAAGT
AACGTTTCTGTACATTATACCACAAAGACTTCTGAAGATAGAAATGGCAA
CTCCTTGATAATGAAAGAACCAGAAAATATAAAAGCAAGAGTGACAGATT
TACCAGTCAGACAGTGTGATGTTCGTTCTATGAATGGTATCCTACCTGGA
GTACATTGGTTCACAAAACGTATAATGTCATCTTAGTCTGTTTTGGAAGT
GATGAATTAAAAGCGATGCTTGATGAAAGATGGAGTCAACCAAAGGTCCC
TCTCCTCGTGTTATGCTTGAAGTCAGATACCACCGTTCAAGCAGTACCTT
CAATAACAGTAGCTGATCAATTGAACTTGAGAAGTTTATCTCGACCCTGG
CAGAGCTGAGCGTGAAAATGACCAAAACCCAAATGAAAGAGTGAGTAAGC
TTTTGATAGCAGACACAGAGAACGAAGGACAGTTGACGTTATCACACCCT
GCAAGACAGTTGTGCTCCACCATTGATGCCTTTGTTTATGTCGTCAAAGC
AGATGATATTGATAAAGGCCTTGGTTCTGGGTTCACCTTATCATATTCAA
GTGGATCAATCGACCTCACAACATTATATAGAATGTCAAAATATCTGCAA
TGTTGTCCTGAATGTCGAACCAAACGAGAAAAAACTTCTATGCTACCAAG
CCTACCAAAACTTGGATTTTATTTTGGGTTTTCAAATCCAAAAGTTGCAA
TGTTTGGCTCAGGGCTTGATCGAAATGGTTTTGTCAAAAAGCTTTTGTGG
GATAAACATTCACCCTTTGTTGTTCAGAAAATGTTCCCCGGTCAATTAGA
AGGTACCTGTGTTGTTGAAAATCTTCTCAATGTTAGATGTGATATCATTA
TGTCGTGTTTCAAAGACCTGTCAATCATGGTATAAAATAGCAAATGATGA
GTTATTATGGCAAAAGAAGCTAGATTGTGATTCACATAGATGGGAAATGG
TTGACCATTTATCACATCCTCAAACACATTTCGAAATGAACCCTGAATCA
ACATTTAAAGAAATAAAAATGTAAACACAGACTTTCCCTTTAAATTCTTG
AGCAGGGCTAAAACTTCAAAATCATTTTTTAGACGAGCAAATCCAGACGA
GTTGAACTTTTATAGCAAAGAAGAGAAATTGTTTTTGACCAAGATGAGAG
AACAATTAAACGAAGAGGGAATCATTACACTGAAGATAAATTTTGATAAC
AGCAATGGGAGAAGAGTGGAAAATACACAACAGCATGGGCAACATGACGA
TGATCAAACTTTTTCTTCAAACAAGGAGGGTGTACTTCTCAGTCGTGTTT
TGAACTTAGTAAATGAATTTCCTTGGCCTAAAAGTAACGTTTCTGTACAT
TATACCACAAAGACTTCTGAAGATAGAAATGGCAACTCCTTGATAATGAA
AGAACCAGAAAATATAAAAGCAAGAGTGACAGATTTACCAGTCAGACAGT
GTGATGTTCGTTCTATGAATGGTATCCTACCTGGAGTACATTGGTTCACA
AAACGTATAATGTCATCTTAGTCTGTTTTGGAAGTGATGAATTAAAAGCG
ATGCTTGATGAAAGATGGAGTCAACCAAAGGTCCCTCTCCTCGTGTTATG
CTTGAAGTCAGATACCACCGTTCAAGCAGTACCTTCAATAACAGTAGCTG
ATCAATTGAACTTGAGAAGTTTATCTCGACCCTGGCAGAGCTGAGCGTGA
AAATGACCAAAACCCAAATGAAAGAGTGAGTAAGCTTTTGATAGCAGACA
CAGAGAACGAAGGACAGTTGACGTTATCACACCCTGCAAGACAGTTGTGC
TCCACCATTGATGCCTTTGTTTATGTCGTCAAAGCAGATGATATTGATAA
AGGCCTTGGTTCTGGGTTCACCTTATCATATTCAAGTGGATCAATCGACC
TCACAACATTATATAGAATGTCAAAATATCTGCAATGTTGTCCTGAATGT
CGAACCAAACGAGAAAAAACTTCTATGCTACCAAGCCTACCAAAACTTGG
ATTTTATTTTGGGTTTTCAAATCCAAAAGTTGCAATGTTTGGCTCAGGGC
TTGATCGAAATGGTTTTGTCAAAAAGCTTTTGTGGGATAAACATTCACCC
TTTGTTGTTCAGAAAATGTTCCCCGGTCAATTAGAAGGTACCTGTGTTGT
TGAAAATCTTCTCAATGTTAGATGTGATATCATTATGTCGTGTTTCAAAG
ACCTGTCAATCATGGTATAAAATAGCAAATGATGAGTTATTATGGCAAAA
GAAGCTAGATTGTGATTCACATAGATGGGAAATGGTTGACCATTTATCAC
ATCCTCAAACACATTTCGAAATGAACCCTGAATCAACATTTAAAGAAATA
AAAATGTAAACACAGACTTTCCCTTTAAATTCTTGAGCAGGGCTAAAACT
TCAAAATCATTTTTTAGACGAGCAAATCCAGACGAGTTGAACTTTTATAG
CAAAGAAGAGAAATTGTTTTTGACCAAGATGAGAGAACAATTAAACGAAG
AGGGAATCATTACACTGAAGATAAATTTTGATAACAGCAATGGGAGAAGA
GTGGAAAATACACAACAGCATGGGCAACATGACGATGATCAAACTTTTTC
TTCAAACAAGGAGGGTGTACTTCTCAGTCGTGTTTTGAACTTAGTAAATG
AATTTCCTTGGCCTAAAAGTAACGTTTCTGTACATTATACCACAAAGACT
TCTGAAGATAGAAATGGCAACTCCTTGATAATGAAAGAACCAGAAAATAT
AAAAGCAAGAGTGACAGATTTACCAGTCAGACAGTGTGATGTTCGTTCTA
TGAATGGTATCCTACCTGGAGTACATTGGTTCACAAAACGTATAATGTCA
TCTTAGTCTGTTTTGGAAGTGATGAATTAAAAGCGATGCTTGATGAAAGA
TGGAGTCAACCAAAGGTCCCTCTCCTCGTGTTATGCTTGAAGTCAGATAC
CACCGTTCAAGCAGTACCTTCAATAACAGTAGCTGATCAATTGAACTTGA
GAAGTTTATCTCGACCCTGGCAGAGCTGAGCGTGAAAATGACCAAAACCC
AAATGAAAGAGTGAGTAAGCTTTTGATAGCAGACACAGAGAACGAAGGAC
AGTTGACGTTATCACACCCTGCAAGACAGTTGTGCTCCACCATTGATGCC
TTTGTTTATGTCGTCAAAGCAGATGATATTGATAAAGGCCTTGGTTCTGG
GTTCACCTTATCATATTCAAGTGGATCAATCGACCTCACAACATTATATA
GAATGTCAAAATATCTGCAATGTTGTCCTGAATGTCGAACCAAACGAGAA
AAAACTTCTATGCTACCAAGCCTACCAAAACTTGGATTTTATTTTGGGTT
TTCAAATCCAAAAGTTGCAATGTTTGGCTCAGGGCTTGATCGAAATGGTT
TTGTCAAAAAGCTTTTGTGGGATAAACATTCACCCTTTGTTGTTCAGAAA
ATGTTCCCCGGTCAATTAGAAGGTACCTGTGTTGTTGAAAATCTTCTCAA
TGTTAGATGTGATATCATTATGTCGTGTTTCAAAGACCTGTCAATCATGG
TATAAAATAGCAAATGATGAGTTATTATGGCAAAAGAAGCTAGATTGTGA
TTCACATAGATGGGAAATGGTTGACCATTTATCACATCCTCAAACACATT
TCGAAATGAACCCTGAATCAACATTTAAAGAAATAAAAATGTAAACACAG
ACTTTCCCTTTAAATTCTTGAGCAGGGCTAAAACTTCAAAATCATTTTTT
AGACGAGCAAATCCAGACGAGTTGAACTTTTATAGCAAAGAAGAGAAATT
GTTTTTGACCAAGATGAGAGAACAATTAAACGAAGAGGGAATCATTACAC
TGAAGATAAATTTTGATAACAGCAATGGGAGAAGAGTGGAAAATACACAA
CAGCATGGGCAACATGACGATGATCAAACTTTTTCTTCAAACAAGGAGGG
TGTACTTCTCAGTCGTGTTTTGAACTTAGTAAATGAATTTCCTTGGCCTA
AAAGTAACGTTTCTGTACATTATACCACAAAGACTTCTGAAGATAGAAAT
GGCAACTCCTTGATAATGAAAGAACCAGAAAATATAAAAGCAAGAGTGAC
AGATTTACCAGTCAGACAGTGTGATGTTCGTTCTATGAATGGTATCCTAC
CTGGAGTACATTGGTTCACAAAACGTATAATGTCATCTTAGTCTGTTTTG
GAAGTGATGAATTAAAAGCGATGCTTGATGAAAGATGGAGTCAACCAAAG
GTCCCTCTCCTCGTGTTATGCTTGAAGTCAGATACCACCGTTCAAGCAGT
ACCTTCAATAACAGTAGCTGATCAATTGAACTTGAGAAGTTTATCTCGAC
CCTGGCAGAGCTGAGCGTGAAAATGACCAAAACCCAAATGAAAGAGTGAG
TAAGCTTTTGATAGCAGACACAGAGAACGAAGGACAGTTGACGTTATCAC
ACCCTGCAAGACAGTTGTGCTCCACCATTGATGCCTTTGTTTATGTCGTC
AAAGCAGATGATATTGATAAAGGCCTTGGTTCTGGGTTCACCTTATCATA
TTCAAGTGGATCAATCGACCTCACAACATTATATAGAATGTCAAAATATC
TGCAATGTTGTCCTGAATGTCGAACCAAACGAGAAAAAACTTCTATGCTA
CCAAGCCTACCAAAACTTGGATTTTATTTTGGGTTTTCAAATCCAAAAGT
TGCAATGTTTGGCTCAGGGCTTGATCGAAATGGTTTTGTCAAAAAGCTTT
TGTGGGATAAACATTCACCCTTTGTTGTTCAGAAAATGTTCCCCGGTCAA
TTAGAAGGTACCTGTGTTGTTGAAAATCTTCTCAATGTTAGATGTGATAT
CATTATGTCGTGTTTCAAAGACCTGTCAATCATGGTATAAAATAGCAAAT
GATGAGTTATTATGGCAAAAGAAGCTAGATTGTGATTCACATAGATGGGA
AATGGTTGACCATTTATCACATCCTCAAACACATTTCGAAATGAACCCTG
AATCAACATTTAAAGAAATAAAAATGTAAACACAGACTTTCCCTTTAAAT
TCTTGAGCAGGGCTAAAACTTCAAAATCATTTTTTAGACGAGCAAATCCA
GACGAGTTGAACTTTTATAGCAAAGAAGAGAAATTGTTTTTGACCAAGAT
GAGAGAACAATTAAACGAAGAGGGAATCATTACACTGAAGATAAATTTTG
ATAACAGCAATGGGAGAAGAGTGGAAAATACACAACAGCATGGGCAACAT
GACGATGATCAAACTTTTTCTTCAAACAAGGAGGGTGTACTTCTCAGTCG
TGTTTTGAACTTAGTAAATGAATTTCCTTGGCCTAAAAGTAACGTTTCTG
TACATTATACCACAAAGACTTCTGAAGATAGAAATGGCAACTCCTTGATA
ATGAAAGAACCAGAAAATATAAAAGCAAGAGTGACAGATTTACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005611XLOC_005611Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010001-proteinTCONS_00010001-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010001-exon-sc0000101-1575043694:82011..82437TCONS_00010001-exon-sc0000101-1575043694:82011..82437Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1575043694:76826..77037TCONS_00010001-exon-sc0000101-1575043694:76826..77037Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1575043694:76009..76220TCONS_00010001-exon-sc0000101-1575043694:76009..76220Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1575043694:74751..74823TCONS_00010001-exon-sc0000101-1575043694:74751..74823Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1575043694:74203..74366TCONS_00010001-exon-sc0000101-1575043694:74203..74366Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1575043694:73299..73465TCONS_00010001-exon-sc0000101-1575043694:73299..73465Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1575043694:72051..72652TCONS_00010001-exon-sc0000101-1575043694:72051..72652Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1510915933:82011..82437TCONS_00010001-exon-sc0000101-1510915933:82011..82437Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1510915933:76826..77037TCONS_00010001-exon-sc0000101-1510915933:76826..77037Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1510915933:76009..76220TCONS_00010001-exon-sc0000101-1510915933:76009..76220Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1510915933:74751..74823TCONS_00010001-exon-sc0000101-1510915933:74751..74823Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1510915933:74203..74366TCONS_00010001-exon-sc0000101-1510915933:74203..74366Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1510915933:73299..73465TCONS_00010001-exon-sc0000101-1510915933:73299..73465Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1510915933:72051..72652TCONS_00010001-exon-sc0000101-1510915933:72051..72652Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1491911889:82011..82437TCONS_00010001-exon-sc0000101-1491911889:82011..82437Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1491911889:76826..77037TCONS_00010001-exon-sc0000101-1491911889:76826..77037Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1491911889:76009..76220TCONS_00010001-exon-sc0000101-1491911889:76009..76220Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1491911889:74751..74823TCONS_00010001-exon-sc0000101-1491911889:74751..74823Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1491911889:74203..74366TCONS_00010001-exon-sc0000101-1491911889:74203..74366Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1491911889:73299..73465TCONS_00010001-exon-sc0000101-1491911889:73299..73465Clytia hemisphaericaexon
TCONS_00010001-exon-sc0000101-1491911889:72051..72652TCONS_00010001-exon-sc0000101-1491911889:72051..72652Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:72051..82437 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.8611	15.3733	8.60124	7.05602	13.165	10.9033	17.3969	20.0602	15.6565	22.4636	28.9835	13.0211	35.0399	29.3691	19.6104	28.362	11.2317	19.0313	31.3467	44.4938	20.4037	16.8691	23.1999	23.6157	30.2539	48.9681	42.1046	42.5299	55.9713	43.4316
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR006689Small_GTPase_ARF/SAR
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005525GTP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00010001 vs. Swiss-Prot (Human)
Match: FBX4 (F-box only protein 4 OS=Homo sapiens GN=FBXO4 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.824e-25
Identity = 89/351 (25.36%), Postives = 150/351 (42.74%), Query Frame = 2 
Query:  350 TSEDRNGNSLIMKEPENIKARVTDLPVPVLLKIFSMLDVISLCRVSKTCQSWYKIANDELLWQKKLDCDSHRWEMVDHLSHPQTHFEMNPEST--------FKEIYLQCCPECRTKREKTSMLPSLPKLGFYFGF-------SNPKVAMFGSGLDR-NGFVKKLLWDKHSPFVVQKMFPGQLEGLGSGFTLSYSS-GSIDLTTLYRMSKAER-----ENDQNPNERVSKLLIADTENEGQLTLSHPARQLCSTIDAFVYVVKADDIDKVCFGSD--ELKAMLDERWSQPKVPLLVLCLKSDTTVQAVPSITVADQLNLRSLSRPWQVRQCDVRSMNGILPGVHWFTKRIMS 1330
             S++R   +   +E +   + +T LP+ V L I S L    LC++  T   W +   D +LW+  L  D   W  VD  S P       P S         +  +Y  CCP   T+R   S   S P  G    F       + P+ AMFG GL+  N  +   L           +   Q++G+GSG     ++    ++  LY  ++ ER     E+    N+  S+    D +   + ++    +++C  +D F+YV  A+   +  +  +   + AM D  +     PLLVL   S   V+ +P   +A +L+L  L+ PW V+  +  ++ G L G+ W  + + S
Sbjct:   38 VSKERVARTTSREEVDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPDLEILKKPISEVTDGAFFDYMAVYRMCCP--YTRRASKS---SRPMYGAVTSFLHSLIIQNEPRFAMFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTTRKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKRHEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLNLLNHPWLVQDTEAETLTGFLNGIEWILEEVES 383
The following BLAST results are available for this feature:
BLAST of TCONS_00010001 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBX45.824e-2525.36F-box only protein 4 OS=Homo sapiens GN=FBXO4 PE=1... [more]
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